RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 K7EQM0 130 aa11.32□□□□□ -0.6
RPRD1A-208ENST00000589050 M0R2Z0 102 aa11.32□□□□□ -0.6
RPRD1A-208ENST00000589050 GIG44P09565 113 aaPredicted RBP11.32□□□□□ -0.6
RPRD1A-208ENST00000589050 SPINK13Q1W4C9 94 aa11.32□□□□□ -0.6
RPRD1A-208ENST00000589050 CCDC28AQ8IWP9 274 aa11.32□□□□□ -0.6
RPRD1A-208ENST00000589050 LYPD6BQ8NI32 183 aa11.32□□□□□ -0.6
RPRD1A-208ENST00000589050 ATG101Q9BSB4 218 aa11.32□□□□□ -0.6
RPRD1A-208ENST00000589050 C1QTNF4Q9BXJ3 329 aa11.32□□□□□ -0.6
RPRD1A-208ENST00000589050 XCL2Q9UBD3 114 aa11.32□□□□□ -0.6
RPRD1A-208ENST00000589050 C11orf94C9JXX5 98 aa11.31□□□□□ -0.6
RPRD1A-208ENST00000589050 PEX7O00628 323 aa11.31□□□□□ -0.6
RPRD1A-208ENST00000589050 ZNF138P52744 262 aa11.31□□□□□ -0.6
RPRD1A-208ENST00000589050 PMS2P11Q13670 270 aa11.31□□□□□ -0.6
RPRD1A-208ENST00000589050 DEFB135Q30KP9 77 aa11.31□□□□□ -0.6
RPRD1A-208ENST00000589050 Q6ZWC4 215 aa11.31□□□□□ -0.6
RPRD1A-208ENST00000589050 CYB561D1Q8N8Q1 229 aa11.31□□□□□ -0.6
RPRD1A-208ENST00000589050 Q8TAT8 98 aa11.31□□□□□ -0.6
RPRD1A-208ENST00000589050 ODF3Q96PU9 254 aa11.31□□□□□ -0.6
RPRD1A-208ENST00000589050 TCEAL7Q9BRU2 100 aa11.31□□□□□ -0.6
RPRD1A-208ENST00000589050 TRAV8-1A0A0A6YYK1 113 aa11.3□□□□□ -0.6
RPRD1A-208ENST00000589050 F6UZH7 168 aa11.3□□□□□ -0.6
RPRD1A-208ENST00000589050 AMBPP02760 352 aa11.3□□□□□ -0.6
RPRD1A-208ENST00000589050 BCL2P10415 239 aa11.3□□□□□ -0.6
RPRD1A-208ENST00000589050 TSPOP30536 169 aa11.3□□□□□ -0.6
RPRD1A-208ENST00000589050 LEPP41159 167 aa11.3□□□□□ -0.6
RPRD1A-208ENST00000589050 HIST1H2BAQ96A08 127 aa11.3□□□□□ -0.6
RPRD1A-208ENST00000589050 SGK494Q96LW2 274 aa11.3□□□□□ -0.6
RPRD1A-208ENST00000589050 SPATA25Q9BR10 227 aa11.3□□□□□ -0.6
RPRD1A-208ENST00000589050 TM2D3Q9BRN9 247 aa11.3□□□□□ -0.6
RPRD1A-208ENST00000589050 RETNQ9HD89 108 aa11.3□□□□□ -0.6
RPRD1A-208ENST00000589050 ZNF492Q9P255 531 aa11.3□□□□□ -0.6
RPRD1A-208ENST00000589050 TRAV12-2A0A075B6T6 113 aa11.29□□□□□ -0.6
RPRD1A-208ENST00000589050 NMBP08949 121 aa11.29□□□□□ -0.6
RPRD1A-208ENST00000589050 CDKN1BP46527 198 aa11.29□□□□□ -0.6
RPRD1A-208ENST00000589050 IFITM2Q01629 132 aa11.29□□□□□ -0.6
RPRD1A-208ENST00000589050 ZNF767PQ75MW2 155 aa11.29□□□□□ -0.6
RPRD1A-208ENST00000589050 RCHY1Q96PM5 261 aa11.29□□□□□ -0.6
RPRD1A-208ENST00000589050 TXNDC17Q9BRA2 123 aa11.29□□□□□ -0.6
RPRD1A-208ENST00000589050 ZMAT4Q9H898 229 aa11.29□□□□□ -0.6
RPRD1A-208ENST00000589050 LOC102723971A0A1B0GUV8 181 aa11.28□□□□□ -0.6
RPRD1A-208ENST00000589050 J3KRW8 73 aa11.28□□□□□ -0.6
RPRD1A-208ENST00000589050 SPRY2O43597 315 aa11.28□□□□□ -0.6
RPRD1A-208ENST00000589050 INSP01308 110 aa11.28□□□□□ -0.6
RPRD1A-208ENST00000589050 NHLRC4P0CG21 123 aaPredicted RBP11.28□□□□□ -0.6
RPRD1A-208ENST00000589050 TAGLN2P37802 199 aaKnown RBP11.28□□□□□ -0.6
RPRD1A-208ENST00000589050 MEF2BQ02080 365 aaPredicted RBP11.28□□□□□ -0.6
RPRD1A-208ENST00000589050 TMEM75Q8N9X5 138 aa11.28□□□□□ -0.6
RPRD1A-208ENST00000589050 CSNK1G2-AS1Q8NCQ2 148 aa11.28□□□□□ -0.6
RPRD1A-208ENST00000589050 RNF183Q96D59 192 aa11.28□□□□□ -0.6
RPRD1A-208ENST00000589050 FAM19A4Q96LR4 140 aa11.28□□□□□ -0.6
RPRD1A-208ENST00000589050 IGF2BP2-AS1Q96M15 143 aa11.28□□□□□ -0.6
RPRD1A-208ENST00000589050 LINC00479Q96M42 142 aa11.28□□□□□ -0.6
RPRD1A-208ENST00000589050 VAX2Q9UIW0 290 aa11.28□□□□□ -0.6
RPRD1A-208ENST00000589050 TRAV34A0A0B4J273 112 aa11.27□□□□□ -0.61
RPRD1A-208ENST00000589050 SCO2A0A1W2PP80 73 aa11.27□□□□□ -0.61
RPRD1A-208ENST00000589050 RBFOX3A6NFN3 312 aa11.27□□□□□ -0.61
RPRD1A-208ENST00000589050 CRXO43186 299 aaPredicted RBP11.27□□□□□ -0.61
RPRD1A-208ENST00000589050 IGLV2-11P01706 119 aa11.27□□□□□ -0.61
RPRD1A-208ENST00000589050 AKR1C3P42330 323 aa11.27□□□□□ -0.61
RPRD1A-208ENST00000589050 RAB14P61106 215 aa11.27□□□□□ -0.61
RPRD1A-208ENST00000589050 FLI1Q01543 452 aaPredicted RBP11.27□□□□□ -0.61
RPRD1A-208ENST00000589050 KIR3DS1Q14943 382 aa11.27□□□□□ -0.61
RPRD1A-208ENST00000589050 RARRES2Q99969 163 aa11.27□□□□□ -0.61
RPRD1A-208ENST00000589050 OVOL2Q9BRP0 275 aa11.27□□□□□ -0.61
RPRD1A-208ENST00000589050 PSG8Q9UQ74 426 aa11.27□□□□□ -0.61
RPRD1A-208ENST00000589050 TP53TG1Q9Y2A0 90 aa11.27□□□□□ -0.61
RPRD1A-208ENST00000589050 TRBV7-9A0A0J9YWB2 115 aa11.26□□□□□ -0.61
RPRD1A-208ENST00000589050 FBLL1A6NHQ2 334 aaKnown RBP11.26□□□□□ -0.61
RPRD1A-208ENST00000589050 GPX1P07203 203 aa11.26□□□□□ -0.61
RPRD1A-208ENST00000589050 CRISP2P16562 243 aa11.26□□□□□ -0.61
RPRD1A-208ENST00000589050 UBE2G1P62253 170 aa11.26□□□□□ -0.61
RPRD1A-208ENST00000589050 GFI1BQ5VTD9 330 aa11.26□□□□□ -0.61
RPRD1A-208ENST00000589050 PRNTQ86SH4 94 aa11.26□□□□□ -0.61
RPRD1A-208ENST00000589050 FMC1Q96HJ9 113 aa11.26□□□□□ -0.61
RPRD1A-208ENST00000589050 GOLT1BQ9Y3E0 138 aa11.26□□□□□ -0.61
RPRD1A-208ENST00000589050 LENEPQ9Y5L5 61 aa11.26□□□□□ -0.61
RPRD1A-208ENST00000589050 IGHV3OR16-12A0A075B7B8 117 aa11.25□□□□□ -0.61
RPRD1A-208ENST00000589050 KLLNB2CW77 178 aa11.25□□□□□ -0.61
RPRD1A-208ENST00000589050 PDE6DO43924 150 aa11.25□□□□□ -0.61
RPRD1A-208ENST00000589050 RNASE4P34096 147 aaKnown RBP11.25□□□□□ -0.61
RPRD1A-208ENST00000589050 TOR2AQ5JU69 321 aa11.25□□□□□ -0.61
RPRD1A-208ENST00000589050 ZNF506Q5JVG8 444 aa11.25□□□□□ -0.61
RPRD1A-208ENST00000589050 ZFAND2AQ8N6M9 145 aa11.25□□□□□ -0.61
RPRD1A-208ENST00000589050 C2CD4CQ8TF44 421 aa11.25□□□□□ -0.61
RPRD1A-208ENST00000589050 FAM210AQ96ND0 272 aa11.25□□□□□ -0.61
RPRD1A-208ENST00000589050 NDFIP1Q9BT67 221 aa11.25□□□□□ -0.61
RPRD1A-208ENST00000589050 EIF5A2Q9GZV4 153 aaKnown RBP11.25□□□□□ -0.61
RPRD1A-208ENST00000589050 AGRNO00468 2067 aa11.24□□□□□ -0.61
RPRD1A-208ENST00000589050 C7orf71A4D174 169 aa11.24□□□□□ -0.61
RPRD1A-208ENST00000589050 BTN1A1Q13410 526 aa11.24□□□□□ -0.61
RPRD1A-208ENST00000589050 PRR9Q5T870 116 aa11.24□□□□□ -0.61
RPRD1A-208ENST00000589050 Q86TA4 180 aa11.24□□□□□ -0.61
RPRD1A-208ENST00000589050 C1orf158Q8N1D5 194 aa11.24□□□□□ -0.61
RPRD1A-208ENST00000589050 OR11H2Q8NH07 326 aa11.24□□□□□ -0.61
RPRD1A-208ENST00000589050 C11orf52Q96A22 123 aa11.24□□□□□ -0.61
RPRD1A-208ENST00000589050 TVP23CQ96ET8 276 aa11.24□□□□□ -0.61
RPRD1A-208ENST00000589050 TMEM208Q9BTX3 173 aa11.24□□□□□ -0.61
RPRD1A-208ENST00000589050 TREM1Q9NP99 234 aa11.24□□□□□ -0.61
RPRD1A-208ENST00000589050 KLF12Q9Y4X4 402 aa11.24□□□□□ -0.61
RPRD1A-208ENST00000589050 TRAV12-3A0A0B4J271 114 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms