RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 HTN3P15516 51 aa10.58□□□□□ -0.72
ATG4D-207ENST00000587256 DAD1P61803 113 aa10.58□□□□□ -0.72
ATG4D-207ENST00000587256 PQLC2Q6ZP29 291 aa10.58□□□□□ -0.72
ATG4D-207ENST00000587256 TRAV12-3A0A0B4J271 114 aa10.57□□□□□ -0.72
ATG4D-207ENST00000587256 HMGB3O15347 200 aaKnown RBP10.57□□□□□ -0.72
ATG4D-207ENST00000587256 AZU1P20160 251 aa10.57□□□□□ -0.72
ATG4D-207ENST00000587256 RPL7L1Q6DKI1 246 aaKnown RBP10.57□□□□□ -0.72
ATG4D-207ENST00000587256 LYPD1Q8N2G4 141 aa10.57□□□□□ -0.72
ATG4D-207ENST00000587256 GNPNAT1Q96EK6 184 aaPredicted RBP10.57□□□□□ -0.72
ATG4D-207ENST00000587256 LINC00477Q96M19 166 aa10.57□□□□□ -0.72
ATG4D-207ENST00000587256 AGPAT4-IT1Q9H0P7 198 aa10.57□□□□□ -0.72
ATG4D-207ENST00000587256 SH3BGRL3Q9H299 93 aa10.57□□□□□ -0.72
ATG4D-207ENST00000587256 C7orf71A4D174 169 aa10.56□□□□□ -0.72
ATG4D-207ENST00000587256 LYRM9A8MSI8 78 aa10.56□□□□□ -0.72
ATG4D-207ENST00000587256 G3V3Q6 166 aa10.56□□□□□ -0.72
ATG4D-207ENST00000587256 SMLR1H3BR10 107 aa10.56□□□□□ -0.72
ATG4D-207ENST00000587256 MBP02144 154 aa10.56□□□□□ -0.72
ATG4D-207ENST00000587256 SLC25A5P05141 298 aaKnown RBP10.56□□□□□ -0.72
ATG4D-207ENST00000587256 SERF2P84101 59 aa10.56□□□□□ -0.72
ATG4D-207ENST00000587256 FAM74A1Q5RGS3 127 aa10.56□□□□□ -0.72
ATG4D-207ENST00000587256 LGALS9CQ6DKI2 356 aa10.56□□□□□ -0.72
ATG4D-207ENST00000587256 C9orf47Q6ZRZ4 202 aa10.56□□□□□ -0.72
ATG4D-207ENST00000587256 CCDC28AQ8IWP9 274 aa10.56□□□□□ -0.72
ATG4D-207ENST00000587256 TMEM263Q8WUH6 116 aaKnown RBP10.56□□□□□ -0.72
ATG4D-207ENST00000587256 VGLL1Q99990 258 aa10.56□□□□□ -0.72
ATG4D-207ENST00000587256 PLA2G2EQ9NZK7 142 aa10.56□□□□□ -0.72
ATG4D-207ENST00000587256 APLNQ9ULZ1 77 aa10.56□□□□□ -0.72
ATG4D-207ENST00000587256 RPH3ALQ9UNE2 315 aa10.56□□□□□ -0.72
ATG4D-207ENST00000587256 ARL14EPLP0DKL9 152 aa10.55□□□□□ -0.72
ATG4D-207ENST00000587256 DEFB130BP0DP73 79 aa10.55□□□□□ -0.72
ATG4D-207ENST00000587256 DEFB130AP0DP74 79 aa10.55□□□□□ -0.72
ATG4D-207ENST00000587256 BTN1A1Q13410 526 aa10.55□□□□□ -0.72
ATG4D-207ENST00000587256 ZNF493Q6ZR52 646 aa10.55□□□□□ -0.72
ATG4D-207ENST00000587256 Q8TAT8 98 aa10.55□□□□□ -0.72
ATG4D-207ENST00000587256 CMTM2Q8TAZ6 248 aa10.55□□□□□ -0.72
ATG4D-207ENST00000587256 HYLS1Q96M11 299 aa10.55□□□□□ -0.72
ATG4D-207ENST00000587256 NDUFAF3Q9BU61 184 aa10.55□□□□□ -0.72
ATG4D-207ENST00000587256 OTORQ9NRC9 128 aa10.55□□□□□ -0.72
ATG4D-207ENST00000587256 PLAC8L1A1L4L8 177 aa10.54□□□□□ -0.72
ATG4D-207ENST00000587256 KLLNB2CW77 178 aa10.54□□□□□ -0.72
ATG4D-207ENST00000587256 GPX1P07203 203 aa10.54□□□□□ -0.72
ATG4D-207ENST00000587256 RNASE4P34096 147 aaKnown RBP10.54□□□□□ -0.72
ATG4D-207ENST00000587256 ZNF138P52744 262 aa10.54□□□□□ -0.72
ATG4D-207ENST00000587256 RNASE8Q8TDE3 154 aaKnown RBP10.54□□□□□ -0.72
ATG4D-207ENST00000587256 RXFP4Q8TDU9 374 aa10.54□□□□□ -0.72
ATG4D-207ENST00000587256 RAB24Q969Q5 203 aa10.54□□□□□ -0.72
ATG4D-207ENST00000587256 FAM19A4Q96LR4 140 aa10.54□□□□□ -0.72
ATG4D-207ENST00000587256 PYGO2Q9BRQ0 406 aa10.54□□□□□ -0.72
ATG4D-207ENST00000587256 RBAKDNA6NC62 111 aa10.53□□□□□ -0.72
ATG4D-207ENST00000587256 TAAR5O14804 337 aa10.53□□□□□ -0.72
ATG4D-207ENST00000587256 STAG3L2P0CL84 134 aa10.53□□□□□ -0.72
ATG4D-207ENST00000587256 STAG3L3P0CL85 134 aa10.53□□□□□ -0.72
ATG4D-207ENST00000587256 CRISP2P16562 243 aa10.53□□□□□ -0.72
ATG4D-207ENST00000587256 CD300CQ08708 224 aa10.53□□□□□ -0.72
ATG4D-207ENST00000587256 IQCF2Q8IXL9 164 aa10.53□□□□□ -0.72
ATG4D-207ENST00000587256 ACTR3CQ9C0K3 210 aaPredicted RBP10.53□□□□□ -0.72
ATG4D-207ENST00000587256 ZNF492Q9P255 531 aa10.53□□□□□ -0.72
ATG4D-207ENST00000587256 TIMM8BQ9Y5J9 83 aaPredicted RBP10.53□□□□□ -0.72
ATG4D-207ENST00000587256 PGPA6NDG6 321 aa10.52□□□□□ -0.73
ATG4D-207ENST00000587256 SNURFLB1AK76 121 aa10.52□□□□□ -0.73
ATG4D-207ENST00000587256 DIRC3C9JPN6 131 aa10.52□□□□□ -0.73
ATG4D-207ENST00000587256 NMBP08949 121 aa10.52□□□□□ -0.73
ATG4D-207ENST00000587256 PRR9Q5T870 116 aa10.52□□□□□ -0.73
ATG4D-207ENST00000587256 ZFAND2AQ8N6M9 145 aa10.52□□□□□ -0.73
ATG4D-207ENST00000587256 NOP10Q9NPE3 64 aaKnown RBP10.52□□□□□ -0.73
ATG4D-207ENST00000587256 CBY3A6NI87 242 aa10.51□□□□□ -0.73
ATG4D-207ENST00000587256 CXorf1O96002 111 aa10.51□□□□□ -0.73
ATG4D-207ENST00000587256 GCHFRP30047 84 aa10.51□□□□□ -0.73
ATG4D-207ENST00000587256 AKR1C8PQ5T2L2 129 aa10.51□□□□□ -0.73
ATG4D-207ENST00000587256 FAM210BQ96KR6 192 aa10.51□□□□□ -0.73
ATG4D-207ENST00000587256 TRBV7-9A0A0J9YWB2 115 aa10.5□□□□□ -0.73
ATG4D-207ENST00000587256 RGS13O14921 159 aa10.5□□□□□ -0.73
ATG4D-207ENST00000587256 ATP5G1P05496 136 aa10.5□□□□□ -0.73
ATG4D-207ENST00000587256 ATP5G3P48201 142 aa10.5□□□□□ -0.73
ATG4D-207ENST00000587256 ZNF345Q14585 488 aa10.5□□□□□ -0.73
ATG4D-207ENST00000587256 GOLT1AQ6ZVE7 132 aa10.5□□□□□ -0.73
ATG4D-207ENST00000587256 SSX7Q7RTT5 188 aa10.5□□□□□ -0.73
ATG4D-207ENST00000587256 ZNF680Q8NEM1 530 aa10.5□□□□□ -0.73
ATG4D-207ENST00000587256 ARPC5LQ9BPX5 153 aa10.5□□□□□ -0.73
ATG4D-207ENST00000587256 TMEM167BQ9NRX6 74 aa10.5□□□□□ -0.73
ATG4D-207ENST00000587256 CTXND1A0A1B0GTU2 59 aa10.49□□□□□ -0.73
ATG4D-207ENST00000587256 ZNF324O75467 553 aaPredicted RBP10.49□□□□□ -0.73
ATG4D-207ENST00000587256 GNG5P63218 68 aa10.49□□□□□ -0.73
ATG4D-207ENST00000587256 TMEM88Q6PEY1 159 aa10.49□□□□□ -0.73
ATG4D-207ENST00000587256 EIF4E3Q8N5X7 224 aaKnown RBP10.49□□□□□ -0.73
ATG4D-207ENST00000587256 ST6GAL2Q96JF0 529 aa10.49□□□□□ -0.73
ATG4D-207ENST00000587256 F5H768 121 aa10.48□□□□□ -0.73
ATG4D-207ENST00000587256 KCNRGQ8N5I3 272 aa10.48□□□□□ -0.73
ATG4D-207ENST00000587256 C5orf17Q8NAS9 161 aa10.48□□□□□ -0.73
ATG4D-207ENST00000587256 TMED6Q8WW62 240 aa10.48□□□□□ -0.73
ATG4D-207ENST00000587256 LINC00467Q9BRT7 94 aa10.48□□□□□ -0.73
ATG4D-207ENST00000587256 CYTL1Q9NRR1 136 aa10.48□□□□□ -0.73
ATG4D-207ENST00000587256 LENEPQ9Y5L5 61 aa10.48□□□□□ -0.73
ATG4D-207ENST00000587256 VPS13DQ5THJ4 4388 aa10.48□□□□□ -0.73
ATG4D-207ENST00000587256 IGHV1OR15-1A0A075B7D0 117 aa10.47□□□□□ -0.73
ATG4D-207ENST00000587256 TRAV8-1A0A0A6YYK1 113 aa10.47□□□□□ -0.73
ATG4D-207ENST00000587256 KANTRA0A1W2PQU2 76 aa10.47□□□□□ -0.73
ATG4D-207ENST00000587256 GAGE12BA1L429 117 aa10.47□□□□□ -0.73
ATG4D-207ENST00000587256 HMSDA8MTL9 139 aa10.47□□□□□ -0.73
ATG4D-207ENST00000587256 GAGE7O76087 117 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms