RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 AK3Q9UIJ7 227 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 SIGLEC9Q9Y336 463 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 WSB1Q9Y6I7 421 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 DNAH9Q9NYC9 4486 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 TCRBV4S1A1TA0A5B7 111 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 CRYM-AS1A6NIL9 109 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 LINC01549A6NIU2 74 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 B4DEV8 164 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 DEDDO75618 318 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 NDUFB6O95139 128 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 KRASP01116 189 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 SLC25A5P05141 298 aaKnown RBP1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 C8orf88P0DMB2 117 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 S100A11P31949 105 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 SNCAP37840 140 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 EGFEM1PQ0D2K5 195 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 BATFQ16520 125 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 C6orf99Q4VX62 202 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 TMEM97Q5BJF2 176 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 XAF1Q6GPH4 301 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 CLVS1Q8IUQ0 354 aaPredicted RBP1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 PCP2Q8IVA1 136 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 OR10W1Q8NGF6 305 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 RNASE11Q8TAA1 199 aaKnown RBP1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 GNPNAT1Q96EK6 184 aaPredicted RBP1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 DIRAS2Q96HU8 199 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 AMELYQ99218 206 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 TBX5Q99593 518 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 TRGV9Q99603 122 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 NMES1Q9C002 83 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 EIF5A2Q9GZV4 153 aaKnown RBP1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 TMEM222Q9H0R3 208 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 FBXL15Q9H469 300 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 GNB4Q9HAV0 340 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 C19orf12Q9NSK7 152 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 PSG11Q9UQ72 335 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 PXMP4Q9Y6I8 212 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 PCNX3Q9H6A9 2034 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 JMJD1CQ15652 2540 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 BORCS7-ASMTA0A0B4J1R7 106 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 IGHV3OR16-9A0A0B4J2B5 98 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 C11orf94C9JXX5 98 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 PHOX2AO14813 284 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 GEMIN2O14893 280 aaKnown RBP1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 PIN1P1O15428 100 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 SFT2D2O95562 160 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 CXCL1P09341 107 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 NPY1RP25929 384 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 SRIP30626 198 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 ARF6P62330 175 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 SUPT4H1P63272 117 aaKnown RBP1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 PSG9Q00887 426 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 DEFB112Q30KQ8 113 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 TDRG1Q3Y452 100 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 NMSQ5H8A3 153 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 AADACL3Q5VUY0 350 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 GATD1Q8NB37 220 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 OR4X1Q8NH49 305 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 OR51H1Q8NH63 302 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 C7orf33Q8WU49 177 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 ZNF702PQ9H963 129 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 F11RQ9Y624 299 aaKnown RBP1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 SEC16AO15027 2179 aa1.38□□□□□ -2.19
SMCHD1-211ENST00000584897 IGKV1-12A0A0C4DH73 117 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 TRBV6-1A0A0K0K1D8 114 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 C3orf85A0A1B0GTC6 90 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 H3BUX3 64 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 M0QXV9 152 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 CNIH1O95406 144 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 IGKV1D-12P01611 117 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 ERVS71-1P61550 626 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 EIF4EBP1Q13541 118 aaPredicted RBP1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 MMDQ15546 238 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 KRTAP13-3Q3SY46 172 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 SAPCD1Q5SSQ6 148 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 HCP5Q6MZN7 132 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 HMGN2P46Q86SG4 172 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 LYG2Q86SG7 212 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 ZFP82Q8N141 532 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 FAM216BQ8N7L0 139 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 SPACA5Q96QH8 159 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 LINC01587Q99440 93 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 TMEM14BQ9NUH8 114 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 METTL1Q9UBP6 276 aaKnown RBP1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 PRO0461Q9UI25 63 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 DSCAMO60469 2012 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 FRAS1Q86XX4 4008 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 NBASA2RRP1 2371 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 POLEQ07864 2286 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 PKHD1L1Q86WI1 4243 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 IGKV1-27A0A075B6S5 117 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 A0A087WYN8 130 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 IGHV3-66A0A0C4DH42 116 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 LOC389332A0A1B0GUA5 103 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 RBAKDNA6NC62 111 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 UMAD1C9J7I0 102 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 F6UZH7 168 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 OVOL1O14753 267 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 FOLR2P14207 255 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 RPL7P18124 248 aaKnown RBP1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms