RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 SAPCD1Q5SSQ6 148 aa8.84□□□□□ -0.99
TOP3A-217ENST00000584582 FAM74A4Q5TZK3 123 aa8.84□□□□□ -0.99
TOP3A-217ENST00000584582 IL17RELQ6ZVW7 336 aa8.84□□□□□ -0.99
TOP3A-217ENST00000584582 CFHR4Q92496 578 aa8.84□□□□□ -0.99
TOP3A-217ENST00000584582 ZFP30Q9Y2G7 519 aa8.84□□□□□ -0.99
TOP3A-217ENST00000584582 HAX1O00165 279 aa8.83□□□□□ -1
TOP3A-217ENST00000584582 ZNF124Q15973 351 aa8.83□□□□□ -1
TOP3A-217ENST00000584582 MSRB1Q9NZV6 116 aa8.83□□□□□ -1
TOP3A-217ENST00000584582 PSMB11A5LHX3 300 aa8.83□□□□□ -1
TOP3A-217ENST00000584582 SCGB2A2Q13296 93 aa8.83□□□□□ -1
TOP3A-217ENST00000584582 SIGLEC15Q6ZMC9 328 aa8.83□□□□□ -1
TOP3A-217ENST00000584582 TP73-AS1Q9UF72 201 aa8.83□□□□□ -1
TOP3A-217ENST00000584582 TP53TG3Q9ULZ0 132 aa8.83□□□□□ -1
TOP3A-217ENST00000584582 MOB4Q9Y3A3 225 aa8.83□□□□□ -1
TOP3A-217ENST00000584582 ITPR1Q14643 2758 aa8.83□□□□□ -1
TOP3A-217ENST00000584582 IGLV11-55A0A075B6I3 123 aa8.83□□□□□ -1
TOP3A-217ENST00000584582 H3BVH4 76 aa8.83□□□□□ -1
TOP3A-217ENST00000584582 RNASE4P34096 147 aaKnown RBP8.83□□□□□ -1
TOP3A-217ENST00000584582 OR10J6PQ8NGY7 276 aa8.83□□□□□ -1
TOP3A-217ENST00000584582 ALKBH7Q9BT30 221 aaPredicted RBP8.83□□□□□ -1
TOP3A-217ENST00000584582 RNF114Q9Y508 228 aa8.83□□□□□ -1
TOP3A-217ENST00000584582 ZANQ9Y493 2812 aa8.83□□□□□ -1
TOP3A-217ENST00000584582 FAM181BA6NEQ2 426 aa8.82□□□□□ -1
TOP3A-217ENST00000584582 TRBV12-3P01733 135 aa8.82□□□□□ -1
TOP3A-217ENST00000584582 IFI27P40305 119 aaPredicted RBP8.82□□□□□ -1
TOP3A-217ENST00000584582 LMO4P61968 165 aa8.82□□□□□ -1
TOP3A-217ENST00000584582 OR10J3Q5JRS4 329 aa8.82□□□□□ -1
TOP3A-217ENST00000584582 MRPL27Q9P0M9 148 aaKnown RBP8.82□□□□□ -1
TOP3A-217ENST00000584582 IGHV1-69DA0A0B4J2H0 117 aa8.82□□□□□ -1
TOP3A-217ENST00000584582 A0A1W2PRX2 142 aa8.82□□□□□ -1
TOP3A-217ENST00000584582 FABP5P3A8MUU1 101 aa8.82□□□□□ -1
TOP3A-217ENST00000584582 IGHV1-69P01742 117 aa8.82□□□□□ -1
TOP3A-217ENST00000584582 CRYGBP07316 175 aa8.82□□□□□ -1
TOP3A-217ENST00000584582 BEX4Q9NWD9 120 aaPredicted RBP8.82□□□□□ -1
TOP3A-217ENST00000584582 C1orf194Q5T5A4 169 aa8.82□□□□□ -1
TOP3A-217ENST00000584582 LY6G5BQ8NDX9 201 aa8.82□□□□□ -1
TOP3A-217ENST00000584582 MRGPRG-AS1Q2M3A8 158 aa8.81□□□□□ -1
TOP3A-217ENST00000584582 OR4X2Q8NGF9 303 aa8.81□□□□□ -1
TOP3A-217ENST00000584582 SNHG12Q9BXW3 62 aa8.81□□□□□ -1
TOP3A-217ENST00000584582 LTAP01374 205 aa8.81□□□□□ -1
TOP3A-217ENST00000584582 ZNF688P0C7X2 276 aa8.81□□□□□ -1
TOP3A-217ENST00000584582 COA6Q5JTJ3 125 aaKnown RBP8.81□□□□□ -1
TOP3A-217ENST00000584582 Q6ZVH6 145 aa8.81□□□□□ -1
TOP3A-217ENST00000584582 DTX2Q86UW9 622 aa8.81□□□□□ -1
TOP3A-217ENST00000584582 UQCR10Q9UDW1 63 aa8.81□□□□□ -1
TOP3A-217ENST00000584582 PHLDA3Q9Y5J5 127 aa8.81□□□□□ -1
TOP3A-217ENST00000584582 VWC2LB2RUY7 222 aa8.81□□□□□ -1
TOP3A-217ENST00000584582 LY6LH3BQJ8 138 aa8.81□□□□□ -1
TOP3A-217ENST00000584582 MSMBP08118 114 aa8.81□□□□□ -1
TOP3A-217ENST00000584582 PAX1P15863 534 aa8.81□□□□□ -1
TOP3A-217ENST00000584582 Q0VG73 95 aa8.81□□□□□ -1
TOP3A-217ENST00000584582 C11orf71Q6IPW1 123 aa8.81□□□□□ -1
TOP3A-217ENST00000584582 DPF1Q92782 380 aa8.81□□□□□ -1
TOP3A-217ENST00000584582 HSPB8Q9UJY1 196 aa8.81□□□□□ -1
TOP3A-217ENST00000584582 IGHV3OR16-12A0A075B7B8 117 aa8.8□□□□□ -1
TOP3A-217ENST00000584582 RPLP1P05386 114 aaKnown RBP8.8□□□□□ -1
TOP3A-217ENST00000584582 SMIM17P0DL12 118 aa8.8□□□□□ -1
TOP3A-217ENST00000584582 EGR2P11161 476 aaPredicted RBP8.8□□□□□ -1
TOP3A-217ENST00000584582 OR10AG1Q8NH19 301 aa8.8□□□□□ -1
TOP3A-217ENST00000584582 PRR25Q96S07 402 aa8.8□□□□□ -1
TOP3A-217ENST00000584582 MIEN1Q9BRT3 115 aa8.8□□□□□ -1
TOP3A-217ENST00000584582 SIRPDQ9H106 197 aa8.8□□□□□ -1
TOP3A-217ENST00000584582 LOC102724200A0A096LPH7 203 aaPredicted RBP8.8□□□□□ -1
TOP3A-217ENST00000584582 TRAV26-2A0A0B4J265 109 aa8.8□□□□□ -1
TOP3A-217ENST00000584582 ORMDL3Q8N138 153 aa8.8□□□□□ -1
TOP3A-217ENST00000584582 C7orf71A4D174 169 aa8.79□□□□□ -1
TOP3A-217ENST00000584582 OOSP1A8MZH6 123 aa8.79□□□□□ -1
TOP3A-217ENST00000584582 IGHV4-59P01825 116 aa8.79□□□□□ -1
TOP3A-217ENST00000584582 GATA1P15976 413 aaPredicted RBP8.79□□□□□ -1
TOP3A-217ENST00000584582 EBLN2Q6P2I7 272 aa8.79□□□□□ -1
TOP3A-217ENST00000584582 TTC9CQ8N5M4 171 aa8.79□□□□□ -1
TOP3A-217ENST00000584582 NPBQ8NG41 125 aa8.79□□□□□ -1
TOP3A-217ENST00000584582 FAM110DQ8TAY7 271 aaPredicted RBP8.79□□□□□ -1
TOP3A-217ENST00000584582 WIPF2Q8TF74 440 aaPredicted RBP8.79□□□□□ -1
TOP3A-217ENST00000584582 DUX3Q96PT4 197 aa8.79□□□□□ -1
TOP3A-217ENST00000584582 CACNG7P62955 275 aa8.79□□□□□ -1
TOP3A-217ENST00000584582 SPOCK3Q9BQ16 436 aa8.79□□□□□ -1
TOP3A-217ENST00000584582 NPFFR1Q9GZQ6 430 aa8.79□□□□□ -1
TOP3A-217ENST00000584582 NUDT3O95989 172 aa8.78□□□□□ -1
TOP3A-217ENST00000584582 HIST2H2BCQ6DN03 193 aa8.78□□□□□ -1
TOP3A-217ENST00000584582 PRSS57Q6UWY2 283 aa8.78□□□□□ -1
TOP3A-217ENST00000584582 FAM231DQ6ZW35 169 aa8.78□□□□□ -1
TOP3A-217ENST00000584582 CELSR1Q9NYQ6 3014 aa8.78□□□□□ -1
TOP3A-217ENST00000584582 B4DSR2 109 aa8.78□□□□□ -1
TOP3A-217ENST00000584582 INS-IGF2F8WCM5 200 aa8.78□□□□□ -1
TOP3A-217ENST00000584582 TCF21O43680 179 aa8.78□□□□□ -1
TOP3A-217ENST00000584582 NDUFA3O95167 84 aa8.78□□□□□ -1
TOP3A-217ENST00000584582 FOXE3Q13461 319 aa8.78□□□□□ -1
TOP3A-217ENST00000584582 FAM106AQ4KMX7 169 aa8.78□□□□□ -1
TOP3A-217ENST00000584582 Q6ZS46 218 aa8.78□□□□□ -1
TOP3A-217ENST00000584582 C8orf86Q6ZUL3 223 aa8.78□□□□□ -1
TOP3A-217ENST00000584582 USP24Q9UPU5 2620 aa8.78□□□□□ -1
TOP3A-217ENST00000584582 UNQ9165/PRO28630Q6UXU0 137 aa8.78□□□□□ -1
TOP3A-217ENST00000584582 RAB37Q96AX2 223 aa8.78□□□□□ -1
TOP3A-217ENST00000584582 RHPN1-AS1Q9BWJ2 59 aa8.78□□□□□ -1
TOP3A-217ENST00000584582 HRNRQ86YZ3 2850 aaPredicted RBP8.77□□□□□ -1
TOP3A-217ENST00000584582 ODF3BA8MYP8 253 aa8.77□□□□□ -1
TOP3A-217ENST00000584582 ATP5L2Q7Z4Y8 100 aa8.77□□□□□ -1
TOP3A-217ENST00000584582 NAA38Q9BRA0 125 aaKnown RBP8.77□□□□□ -1
TOP3A-217ENST00000584582 IGLC2P0DOY2 106 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms