RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 ASCL2Q99929 193 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 PARLQ9H300 379 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 TGIF2-C20orf24A0A0A6YYL0 155 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 ZNF705FA8MVS1 300 aaPredicted RBP8.19□□□□□ -1.1
TOP3A-216ENST00000583804 K7EQG2 157 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 S100A9P06702 114 aaKnown RBP8.19□□□□□ -1.1
TOP3A-216ENST00000583804 ZNF674Q2M3X9 581 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 DCANP1Q8TF63 244 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 RPUSD4Q96CM3 377 aaKnown RBP8.19□□□□□ -1.1
TOP3A-216ENST00000583804 FAM210BQ96KR6 192 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 C20orf173Q96LM9 149 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 ARL2-SNX15V9GYD0 113 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 TRAV2A0A0B4J234 112 aa8.18□□□□□ -1.1
TOP3A-216ENST00000583804 TRAV8-2A0A0B4J237 113 aa8.18□□□□□ -1.1
TOP3A-216ENST00000583804 PRB2P02812 416 aaPredicted RBP8.18□□□□□ -1.1
TOP3A-216ENST00000583804 PFN1P07737 140 aaKnown RBP8.18□□□□□ -1.1
TOP3A-216ENST00000583804 CD7P09564 240 aa8.18□□□□□ -1.1
TOP3A-216ENST00000583804 ZNF688P0C7X2 276 aa8.18□□□□□ -1.1
TOP3A-216ENST00000583804 ID1P41134 155 aa8.18□□□□□ -1.1
TOP3A-216ENST00000583804 KPRPQ5T749 579 aaPredicted RBP8.18□□□□□ -1.1
TOP3A-216ENST00000583804 IGKV2-40A0A087WW87 121 aaPredicted RBP8.17□□□□□ -1.1
TOP3A-216ENST00000583804 A0A087X0K7 114 aa8.17□□□□□ -1.1
TOP3A-216ENST00000583804 TRAV34A0A0B4J273 112 aa8.17□□□□□ -1.1
TOP3A-216ENST00000583804 IGKV2D-40P01614 121 aaPredicted RBP8.17□□□□□ -1.1
TOP3A-216ENST00000583804 ZNF705DP0CH99 300 aaPredicted RBP8.17□□□□□ -1.1
TOP3A-216ENST00000583804 ZNF705BP0CI00 300 aaPredicted RBP8.17□□□□□ -1.1
TOP3A-216ENST00000583804 CMC4P56277 68 aaPredicted RBP8.17□□□□□ -1.1
TOP3A-216ENST00000583804 SNRPD3P62318 126 aaKnown RBP8.17□□□□□ -1.1
TOP3A-216ENST00000583804 ADIRFQ15847 76 aa8.17□□□□□ -1.1
TOP3A-216ENST00000583804 SAMD13Q5VXD3 122 aa8.17□□□□□ -1.1
TOP3A-216ENST00000583804 CMTM2Q8TAZ6 248 aa8.17□□□□□ -1.1
TOP3A-216ENST00000583804 LINC00479Q96M42 142 aa8.17□□□□□ -1.1
TOP3A-216ENST00000583804 DERL1Q9BUN8 251 aa8.17□□□□□ -1.1
TOP3A-216ENST00000583804 AAMDCQ9H7C9 122 aa8.17□□□□□ -1.1
TOP3A-216ENST00000583804 SRD5A3Q9H8P0 318 aa8.17□□□□□ -1.1
TOP3A-216ENST00000583804 ZNF331Q9NQX6 463 aaPredicted RBP8.17□□□□□ -1.1
TOP3A-216ENST00000583804 OTORQ9NRC9 128 aa8.17□□□□□ -1.1
TOP3A-216ENST00000583804 URGCP-MRPS24S4R325 110 aa8.17□□□□□ -1.1
TOP3A-216ENST00000583804 SORL1Q92673 2214 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 A0A1W2PRE2 83 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 OR11H12B2RN74 326 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 PRAC2D3DTV9 90 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 H7BYZ3 331 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 ISLRO14498 428 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 PHOX2AO14813 284 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 HIST1H2BKO60814 126 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 HIST1H2BJP06899 126 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 HIST1H2BOP23527 126 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 S100PP25815 95 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 HIST1H2BBP33778 126 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 HIST1H2BDP58876 126 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 DEFB131AP59861 70 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 HIST1H2BCP62807 126 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 HIST2H2BEQ16778 126 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 PSMG4Q5JS54 123 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.16□□□□□ -1.1
TOP3A-216ENST00000583804 GOLT1AQ6ZVE7 132 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 ZNF738Q8NE65 137 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 HIST1H2BHQ93079 126 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 BTF3L4Q96K17 158 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 HIST1H2BNQ99877 126 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 HIST1H2BMQ99879 126 aa8.16□□□□□ -1.1
TOP3A-216ENST00000583804 NOTCH1P46531 2555 aa8.15□□□□□ -1.1
TOP3A-216ENST00000583804 TRAV8-1A0A0A6YYK1 113 aa8.15□□□□□ -1.1
TOP3A-216ENST00000583804 F6UB75 175 aa8.15□□□□□ -1.1
TOP3A-216ENST00000583804 PEX7O00628 323 aa8.15□□□□□ -1.1
TOP3A-216ENST00000583804 SOCS3O14543 225 aa8.15□□□□□ -1.1
TOP3A-216ENST00000583804 PPP1R2P9O14990 202 aa8.15□□□□□ -1.1
TOP3A-216ENST00000583804 TRGC2P03986 189 aa8.15□□□□□ -1.1
TOP3A-216ENST00000583804 TYMSP04818 313 aa8.15□□□□□ -1.1
TOP3A-216ENST00000583804 PSG9Q00887 426 aa8.15□□□□□ -1.1
TOP3A-216ENST00000583804 ZNF124Q15973 351 aa8.15□□□□□ -1.1
TOP3A-216ENST00000583804 ODF3L2Q3SX64 289 aa8.15□□□□□ -1.1
TOP3A-216ENST00000583804 APRG1Q8IVJ8 170 aa8.15□□□□□ -1.1
TOP3A-216ENST00000583804 Q8N1Y9 231 aa8.15□□□□□ -1.1
TOP3A-216ENST00000583804 IMMP2LQ96T52 175 aa8.15□□□□□ -1.1
TOP3A-216ENST00000583804 MAP6D1Q9H9H5 199 aa8.15□□□□□ -1.1
TOP3A-216ENST00000583804 ERCC8Q13216 396 aa8.14□□□□□ -1.11
TOP3A-216ENST00000583804 PDE6HQ13956 83 aa8.14□□□□□ -1.11
TOP3A-216ENST00000583804 DEFB125Q8N687 156 aa8.14□□□□□ -1.11
TOP3A-216ENST00000583804 NHLRC2Q8NBF2 726 aa8.14□□□□□ -1.11
TOP3A-216ENST00000583804 C11orf52Q96A22 123 aa8.14□□□□□ -1.11
TOP3A-216ENST00000583804 SLC50A1Q9BRV3 221 aa8.14□□□□□ -1.11
TOP3A-216ENST00000583804 WFDC10AQ9H1F0 79 aa8.14□□□□□ -1.11
TOP3A-216ENST00000583804 AURKAIP1Q9NWT8 199 aaPredicted RBP8.14□□□□□ -1.11
TOP3A-216ENST00000583804 EPDR1Q9UM22 224 aa8.14□□□□□ -1.11
TOP3A-216ENST00000583804 LY96Q9Y6Y9 160 aa8.14□□□□□ -1.11
TOP3A-216ENST00000583804 PGPEP1LA6NFU8 196 aa8.13□□□□□ -1.11
TOP3A-216ENST00000583804 ZNF253O75346 499 aa8.13□□□□□ -1.11
TOP3A-216ENST00000583804 IGKV3-20P01619 116 aa8.13□□□□□ -1.11
TOP3A-216ENST00000583804 TRGC1P0CF51 173 aa8.13□□□□□ -1.11
TOP3A-216ENST00000583804 CSN1S1P47710 185 aa8.13□□□□□ -1.11
TOP3A-216ENST00000583804 NDUFA6P56556 154 aa8.13□□□□□ -1.11
TOP3A-216ENST00000583804 FAM3BP58499 235 aaPredicted RBP8.13□□□□□ -1.11
TOP3A-216ENST00000583804 PSG3Q16557 428 aa8.13□□□□□ -1.11
TOP3A-216ENST00000583804 DNLZQ5SXM8 178 aa8.13□□□□□ -1.11
TOP3A-216ENST00000583804 LINC01551Q86U37 167 aa8.13□□□□□ -1.11
TOP3A-216ENST00000583804 C5orf17Q8NAS9 161 aa8.13□□□□□ -1.11
TOP3A-216ENST00000583804 Q8TAT8 98 aa8.13□□□□□ -1.11
TOP3A-216ENST00000583804 FRZBQ92765 325 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms