RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 GFI1BQ5VTD9 330 aa11.82□□□□□ -0.52
RNF43-206ENST00000582293 MAP1LC3BQ9GZQ8 125 aa11.82□□□□□ -0.52
RNF43-206ENST00000582293 TMEM167BQ9NRX6 74 aa11.82□□□□□ -0.52
RNF43-206ENST00000582293 UMAD1C9J7I0 102 aa11.81□□□□□ -0.52
RNF43-206ENST00000582293 INSP01308 110 aa11.81□□□□□ -0.52
RNF43-206ENST00000582293 SLC51BQ86UW2 128 aa11.81□□□□□ -0.52
RNF43-206ENST00000582293 IL17DQ8TAD2 202 aa11.81□□□□□ -0.52
RNF43-206ENST00000582293 Q8TAT8 98 aa11.81□□□□□ -0.52
RNF43-206ENST00000582293 MBD3L1Q8WWY6 194 aa11.81□□□□□ -0.52
RNF43-206ENST00000582293 LINC00477Q96M19 166 aa11.81□□□□□ -0.52
RNF43-206ENST00000582293 ZNF492Q9P255 531 aa11.81□□□□□ -0.52
RNF43-206ENST00000582293 YTHDF2Q9Y5A9 579 aaKnown RBP11.81□□□□□ -0.52
RNF43-206ENST00000582293 RBAKDNA6NC62 111 aa11.8□□□□□ -0.52
RNF43-206ENST00000582293 KLLNB2CW77 178 aa11.8□□□□□ -0.52
RNF43-206ENST00000582293 CRISP2P16562 243 aa11.8□□□□□ -0.52
RNF43-206ENST00000582293 PRR9Q5T870 116 aa11.8□□□□□ -0.52
RNF43-206ENST00000582293 ZFAND2AQ8N6M9 145 aa11.8□□□□□ -0.52
RNF43-206ENST00000582293 ARL6IP6Q8N6S5 226 aa11.8□□□□□ -0.52
RNF43-206ENST00000582293 FAM213BQ8TBF2 198 aa11.8□□□□□ -0.52
RNF43-206ENST00000582293 RXFP4Q8TDU9 374 aa11.8□□□□□ -0.52
RNF43-206ENST00000582293 PPP1R14DQ9NXH3 145 aa11.8□□□□□ -0.52
RNF43-206ENST00000582293 GOLT1BQ9Y3E0 138 aa11.8□□□□□ -0.52
RNF43-206ENST00000582293 A0A1W2PRE2 83 aa11.79□□□□□ -0.52
RNF43-206ENST00000582293 J3KRW8 73 aa11.79□□□□□ -0.52
RNF43-206ENST00000582293 SLC25A5P05141 298 aaKnown RBP11.79□□□□□ -0.52
RNF43-206ENST00000582293 LEPP41159 167 aa11.79□□□□□ -0.52
RNF43-206ENST00000582293 CSN1S1P47710 185 aa11.79□□□□□ -0.52
RNF43-206ENST00000582293 DPPA3Q6W0C5 159 aa11.79□□□□□ -0.52
RNF43-206ENST00000582293 IQCF2Q8IXL9 164 aa11.79□□□□□ -0.52
RNF43-206ENST00000582293 RPH3ALQ9UNE2 315 aa11.79□□□□□ -0.52
RNF43-206ENST00000582293 BOLA1Q9Y3E2 137 aa11.79□□□□□ -0.52
RNF43-206ENST00000582293 DYNC2H1Q8NCM8 4307 aaKnown RBP11.79□□□□□ -0.52
RNF43-206ENST00000582293 SMIM9A6NGZ8 99 aa11.78□□□□□ -0.52
RNF43-206ENST00000582293 FAM74A7A6NL05 159 aa11.78□□□□□ -0.52
RNF43-206ENST00000582293 ZNF705GA8MUZ8 300 aaPredicted RBP11.78□□□□□ -0.52
RNF43-206ENST00000582293 TSPOP30536 169 aa11.78□□□□□ -0.52
RNF43-206ENST00000582293 ZNF138P52744 262 aa11.78□□□□□ -0.52
RNF43-206ENST00000582293 UBE2G2P60604 165 aa11.78□□□□□ -0.52
RNF43-206ENST00000582293 SUMO1P63165 101 aaKnown RBP11.78□□□□□ -0.52
RNF43-206ENST00000582293 TMEM78Q5T7P6 136 aa11.78□□□□□ -0.52
RNF43-206ENST00000582293 Q6ZQT7 251 aa11.78□□□□□ -0.52
RNF43-206ENST00000582293 GOLT1AQ6ZVE7 132 aa11.78□□□□□ -0.52
RNF43-206ENST00000582293 CELA1Q9UNI1 258 aa11.78□□□□□ -0.52
RNF43-206ENST00000582293 TRAV8-1A0A0A6YYK1 113 aa11.77□□□□□ -0.53
RNF43-206ENST00000582293 PLAC8L1A1L4L8 177 aa11.77□□□□□ -0.53
RNF43-206ENST00000582293 ZNF324O75467 553 aaPredicted RBP11.77□□□□□ -0.53
RNF43-206ENST00000582293 TCRAP04437 139 aa11.77□□□□□ -0.53
RNF43-206ENST00000582293 AZU1P20160 251 aa11.77□□□□□ -0.53
RNF43-206ENST00000582293 SULT1A2P50226 295 aa11.77□□□□□ -0.53
RNF43-206ENST00000582293 BTN1A1Q13410 526 aa11.77□□□□□ -0.53
RNF43-206ENST00000582293 FAM74A1Q5RGS3 127 aa11.77□□□□□ -0.53
RNF43-206ENST00000582293 CASC10Q5T4H9 136 aa11.77□□□□□ -0.53
RNF43-206ENST00000582293 ZFAND6Q6FIF0 208 aa11.77□□□□□ -0.53
RNF43-206ENST00000582293 C5orf17Q8NAS9 161 aa11.77□□□□□ -0.53
RNF43-206ENST00000582293 CMTM2Q8TAZ6 248 aa11.77□□□□□ -0.53
RNF43-206ENST00000582293 SFT2D1Q8WV19 159 aa11.77□□□□□ -0.53
RNF43-206ENST00000582293 TVP23CQ96ET8 276 aa11.77□□□□□ -0.53
RNF43-206ENST00000582293 TRAV12-3A0A0B4J271 114 aa11.76□□□□□ -0.53
RNF43-206ENST00000582293 A0A1B0GV50 99 aa11.76□□□□□ -0.53
RNF43-206ENST00000582293 C3orf84H3BNL1 204 aa11.76□□□□□ -0.53
RNF43-206ENST00000582293 IGLV2-11P01706 119 aa11.76□□□□□ -0.53
RNF43-206ENST00000582293 CCL20P78556 96 aa11.76□□□□□ -0.53
RNF43-206ENST00000582293 PLECQ15149 4684 aaKnown RBP11.76□□□□□ -0.53
RNF43-206ENST00000582293 CCDC28AQ8IWP9 274 aa11.76□□□□□ -0.53
RNF43-206ENST00000582293 C20orf144Q9BQM9 153 aa11.76□□□□□ -0.53
RNF43-206ENST00000582293 EPDR1Q9UM22 224 aa11.76□□□□□ -0.53
RNF43-206ENST00000582293 TRBV7-9A0A0J9YWB2 115 aa11.75□□□□□ -0.53
RNF43-206ENST00000582293 C7orf71A4D174 169 aa11.75□□□□□ -0.53
RNF43-206ENST00000582293 HBE1P02100 147 aa11.75□□□□□ -0.53
RNF43-206ENST00000582293 NMBP08949 121 aa11.75□□□□□ -0.53
RNF43-206ENST00000582293 H2AFB1P0C5Y9 115 aa11.75□□□□□ -0.53
RNF43-206ENST00000582293 NANOS2P60321 138 aaKnown RBP11.75□□□□□ -0.53
RNF43-206ENST00000582293 RRN3P1Q2M238 152 aa11.75□□□□□ -0.53
RNF43-206ENST00000582293 TMEM256Q8N2U0 113 aa11.75□□□□□ -0.53
RNF43-206ENST00000582293 SGK494Q96LW2 274 aa11.75□□□□□ -0.53
RNF43-206ENST00000582293 LINC01587Q99440 93 aa11.75□□□□□ -0.53
RNF43-206ENST00000582293 TMEM208Q9BTX3 173 aa11.75□□□□□ -0.53
RNF43-206ENST00000582293 LOC102723971A0A1B0GUV8 181 aa11.74□□□□□ -0.53
RNF43-206ENST00000582293 ATP5G3P48201 142 aa11.74□□□□□ -0.53
RNF43-206ENST00000582293 RAB5CP51148 216 aa11.74□□□□□ -0.53
RNF43-206ENST00000582293 TAS2R60P59551 318 aa11.74□□□□□ -0.53
RNF43-206ENST00000582293 EIF5AL1Q6IS14 154 aaKnown RBP11.74□□□□□ -0.53
RNF43-206ENST00000582293 C11orf45Q8TAV5 145 aa11.74□□□□□ -0.53
RNF43-206ENST00000582293 LINC00479Q96M42 142 aa11.74□□□□□ -0.53
RNF43-206ENST00000582293 LENEPQ9Y5L5 61 aa11.74□□□□□ -0.53
RNF43-206ENST00000582293 KMT2CQ8NEZ4 4911 aaKnown RBP11.73□□□□□ -0.53
RNF43-206ENST00000582293 TRAV1-1A0A0B4J248 108 aa11.73□□□□□ -0.53
RNF43-206ENST00000582293 H7BYZ3 331 aa11.73□□□□□ -0.53
RNF43-206ENST00000582293 RNASE4P34096 147 aaKnown RBP11.73□□□□□ -0.53
RNF43-206ENST00000582293 SERTM2A0A1B0GWG4 89 aa11.72□□□□□ -0.53
RNF43-206ENST00000582293 PAGE4O60829 102 aa11.72□□□□□ -0.53
RNF43-206ENST00000582293 GPX1P07203 203 aa11.72□□□□□ -0.53
RNF43-206ENST00000582293 EMP1P54849 157 aa11.72□□□□□ -0.53
RNF43-206ENST00000582293 PMS2P11Q13670 270 aa11.72□□□□□ -0.53
RNF43-206ENST00000582293 C12orf74Q32Q52 190 aa11.72□□□□□ -0.53
RNF43-206ENST00000582293 ALKAL2Q6UX46 152 aa11.72□□□□□ -0.53
RNF43-206ENST00000582293 ZNF767PQ75MW2 155 aa11.72□□□□□ -0.53
RNF43-206ENST00000582293 CYB561D1Q8N8Q1 229 aa11.72□□□□□ -0.53
RNF43-206ENST00000582293 RNASE8Q8TDE3 154 aaKnown RBP11.72□□□□□ -0.53
RNF43-206ENST00000582293 ATG101Q9BSB4 218 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms