RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 SGK494Q96LW2 274 aa13.5□□□□□ -0.25
EIF4A1-216ENST00000580888 RBAKDNA6NC62 111 aa13.49□□□□□ -0.25
EIF4A1-216ENST00000580888 CHEK1O14757 476 aa13.49□□□□□ -0.25
EIF4A1-216ENST00000580888 GATCO43716 136 aaKnown RBP13.49□□□□□ -0.25
EIF4A1-216ENST00000580888 FAM106AQ4KMX7 169 aa13.49□□□□□ -0.25
EIF4A1-216ENST00000580888 LCN12Q6JVE5 192 aa13.49□□□□□ -0.25
EIF4A1-216ENST00000580888 ZFP82Q8N141 532 aa13.49□□□□□ -0.25
EIF4A1-216ENST00000580888 WFDC9Q8NEX5 89 aa13.49□□□□□ -0.25
EIF4A1-216ENST00000580888 SMPXQ9UHP9 88 aa13.49□□□□□ -0.25
EIF4A1-216ENST00000580888 IGHV3-66A0A0C4DH42 116 aa13.48□□□□□ -0.25
EIF4A1-216ENST00000580888 C5orf52A6NGY3 159 aa13.48□□□□□ -0.25
EIF4A1-216ENST00000580888 LGALS9O00182 355 aa13.48□□□□□ -0.25
EIF4A1-216ENST00000580888 PRNTQ86SH4 94 aa13.48□□□□□ -0.25
EIF4A1-216ENST00000580888 DAZ1Q9NQZ3 744 aaKnown RBP13.48□□□□□ -0.25
EIF4A1-216ENST00000580888 IGHV3OR16-13A0A075B7E8 117 aa13.47□□□□□ -0.25
EIF4A1-216ENST00000580888 IGHV3-49A0A0A0MS15 119 aa13.47□□□□□ -0.25
EIF4A1-216ENST00000580888 IGHV3-74A0A0B4J1X5 117 aa13.47□□□□□ -0.25
EIF4A1-216ENST00000580888 ZNF705GA8MUZ8 300 aaPredicted RBP13.47□□□□□ -0.25
EIF4A1-216ENST00000580888 SOCS3O14543 225 aa13.47□□□□□ -0.25
EIF4A1-216ENST00000580888 HLA-DMBP28068 263 aa13.47□□□□□ -0.25
EIF4A1-216ENST00000580888 TCTEX1D4Q5JR98 221 aa13.47□□□□□ -0.25
EIF4A1-216ENST00000580888 ACTL10Q5JWF8 245 aa13.47□□□□□ -0.25
EIF4A1-216ENST00000580888 C8orf86Q6ZUL3 223 aa13.47□□□□□ -0.25
EIF4A1-216ENST00000580888 PPP1R14DQ9NXH3 145 aa13.47□□□□□ -0.25
EIF4A1-216ENST00000580888 A8MWP6 167 aa13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 HIST1H2BKO60814 126 aa13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 HIST1H2BJP06899 126 aa13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 HIST1H2BOP23527 126 aa13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 HIST1H2BBP33778 126 aa13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 CDX1P47902 265 aaPredicted RBP13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 HIST1H2BDP58876 126 aa13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 HIST1H2BCP62807 126 aa13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 HIST2H2BEQ16778 126 aa13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 TM4SF20Q53R12 229 aa13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 OXLD1Q5BKU9 147 aa13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 OR4B1Q8NGF8 309 aa13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 TSKUQ8WUA8 353 aa13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 FRZBQ92765 325 aa13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 HIST1H2BHQ93079 126 aa13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 HIST1H2BNQ99877 126 aa13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 HIST1H2BMQ99879 126 aa13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 UFC1Q9Y3C8 167 aa13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 TSSC4Q9Y5U2 329 aaPredicted RBP13.46□□□□□ -0.25
EIF4A1-216ENST00000580888 FAM231BA6NCW3 169 aa13.45□□□□□ -0.26
EIF4A1-216ENST00000580888 IZUMO1RA6ND01 250 aa13.45□□□□□ -0.26
EIF4A1-216ENST00000580888 SAPCD1Q5SSQ6 148 aa13.45□□□□□ -0.26
EIF4A1-216ENST00000580888 IGFL4Q6B9Z1 124 aa13.45□□□□□ -0.26
EIF4A1-216ENST00000580888 ZC2HC1AQ96GY0 325 aa13.45□□□□□ -0.26
EIF4A1-216ENST00000580888 RHPN1-AS1Q9BWJ2 59 aa13.45□□□□□ -0.26
EIF4A1-216ENST00000580888 RPP21Q9H633 154 aaKnown RBP13.45□□□□□ -0.26
EIF4A1-216ENST00000580888 IGKV2-40A0A087WW87 121 aaPredicted RBP13.44□□□□□ -0.26
EIF4A1-216ENST00000580888 ZNF705FA8MVS1 300 aaPredicted RBP13.44□□□□□ -0.26
EIF4A1-216ENST00000580888 IGKV2D-40P01614 121 aaPredicted RBP13.44□□□□□ -0.26
EIF4A1-216ENST00000580888 TRGC1P0CF51 173 aa13.44□□□□□ -0.26
EIF4A1-216ENST00000580888 CRIP1P50238 77 aa13.44□□□□□ -0.26
EIF4A1-216ENST00000580888 COX19Q49B96 90 aa13.44□□□□□ -0.26
EIF4A1-216ENST00000580888 GBGT1Q8N5D6 347 aa13.44□□□□□ -0.26
EIF4A1-216ENST00000580888 PRR25Q96S07 402 aa13.44□□□□□ -0.26
EIF4A1-216ENST00000580888 GFRA4Q9GZZ7 299 aa13.44□□□□□ -0.26
EIF4A1-216ENST00000580888 IGHV4OR15-8A0A075B7B6 117 aa13.43□□□□□ -0.26
EIF4A1-216ENST00000580888 A0A087WW49 117 aa13.43□□□□□ -0.26
EIF4A1-216ENST00000580888 TMEM213A2RRL7 107 aa13.43□□□□□ -0.26
EIF4A1-216ENST00000580888 PRAC2D3DTV9 90 aa13.43□□□□□ -0.26
EIF4A1-216ENST00000580888 UBE2CO00762 179 aa13.43□□□□□ -0.26
EIF4A1-216ENST00000580888 FOXA3P55318 350 aaPredicted RBP13.43□□□□□ -0.26
EIF4A1-216ENST00000580888 PRR27Q6MZM9 219 aa13.43□□□□□ -0.26
EIF4A1-216ENST00000580888 VGLL1Q99990 258 aa13.43□□□□□ -0.26
EIF4A1-216ENST00000580888 A8MWL6 223 aa13.42□□□□□ -0.26
EIF4A1-216ENST00000580888 P01737 135 aa13.42□□□□□ -0.26
EIF4A1-216ENST00000580888 PRB2P02812 416 aaPredicted RBP13.42□□□□□ -0.26
EIF4A1-216ENST00000580888 RPL19P84098 196 aaKnown RBP13.42□□□□□ -0.26
EIF4A1-216ENST00000580888 RASL11AQ6T310 242 aa13.42□□□□□ -0.26
EIF4A1-216ENST00000580888 C9orf47Q6ZRZ4 202 aa13.42□□□□□ -0.26
EIF4A1-216ENST00000580888 GNB1LQ9BYB4 327 aa13.42□□□□□ -0.26
EIF4A1-216ENST00000580888 NAT8BQ9UHF3 227 aa13.42□□□□□ -0.26
EIF4A1-216ENST00000580888 A0A1W2PRX2 142 aa13.41□□□□□ -0.26
EIF4A1-216ENST00000580888 CA1P00915 261 aaPredicted RBP13.41□□□□□ -0.26
EIF4A1-216ENST00000580888 CD33P20138 364 aa13.41□□□□□ -0.26
EIF4A1-216ENST00000580888 BMI1P35226 326 aa13.41□□□□□ -0.26
EIF4A1-216ENST00000580888 SNRPEP62304 92 aaKnown RBP13.41□□□□□ -0.26
EIF4A1-216ENST00000580888 KLF5Q13887 457 aaPredicted RBP13.41□□□□□ -0.26
EIF4A1-216ENST00000580888 RNF182Q8N6D2 247 aa13.41□□□□□ -0.26
EIF4A1-216ENST00000580888 NUP35Q8NFH5 326 aa13.41□□□□□ -0.26
EIF4A1-216ENST00000580888 DAZAP1Q96EP5 407 aaKnown RBP13.41□□□□□ -0.26
EIF4A1-216ENST00000580888 C8orf49Q96NF6 230 aa13.41□□□□□ -0.26
EIF4A1-216ENST00000580888 NRN1Q9NPD7 142 aa13.41□□□□□ -0.26
EIF4A1-216ENST00000580888 DNAH9Q9NYC9 4486 aa13.4□□□□□ -0.26
EIF4A1-216ENST00000580888 S100A6P06703 90 aa13.4□□□□□ -0.26
EIF4A1-216ENST00000580888 HOXA5P20719 270 aa13.4□□□□□ -0.26
EIF4A1-216ENST00000580888 COA6Q5JTJ3 125 aaKnown RBP13.4□□□□□ -0.26
EIF4A1-216ENST00000580888 SAMD13Q5VXD3 122 aa13.4□□□□□ -0.26
EIF4A1-216ENST00000580888 C4orf3Q8WVX3 66 aa13.4□□□□□ -0.26
EIF4A1-216ENST00000580888 C16orf92Q96LL3 132 aa13.4□□□□□ -0.26
EIF4A1-216ENST00000580888 C20orf173Q96LM9 149 aa13.4□□□□□ -0.26
EIF4A1-216ENST00000580888 NEU1Q99519 415 aa13.4□□□□□ -0.26
EIF4A1-216ENST00000580888 TRAPPC1Q9Y5R8 145 aa13.4□□□□□ -0.26
EIF4A1-216ENST00000580888 COL7A1Q02388 2944 aa13.39□□□□□ -0.27
EIF4A1-216ENST00000580888 FRMD6-AS1P0C7T7 363 aa13.39□□□□□ -0.27
EIF4A1-216ENST00000580888 IGLL1P15814 213 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms