RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 CRIP1P50238 77 aa11.22□□□□□ -0.61
CDK5RAP3-218ENST00000580391 ZNF738Q8NE65 137 aa11.22□□□□□ -0.61
CDK5RAP3-218ENST00000580391 FRZBQ92765 325 aa11.22□□□□□ -0.61
CDK5RAP3-218ENST00000580391 BTF3L4Q96K17 158 aa11.22□□□□□ -0.61
CDK5RAP3-218ENST00000580391 RBAKDNA6NC62 111 aa11.21□□□□□ -0.61
CDK5RAP3-218ENST00000580391 C2orf70A6NJV1 201 aa11.21□□□□□ -0.61
CDK5RAP3-218ENST00000580391 NPIPB6E9PJ23 425 aa11.21□□□□□ -0.61
CDK5RAP3-218ENST00000580391 KLF5Q13887 457 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP3-218ENST00000580391 DAZAP1Q96EP5 407 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP3-218ENST00000580391 NEU1Q99519 415 aa11.21□□□□□ -0.61
CDK5RAP3-218ENST00000580391 WNK1Q9H4A3 2382 aa11.21□□□□□ -0.62
CDK5RAP3-218ENST00000580391 FBLL1A6NHQ2 334 aaKnown RBP11.21□□□□□ -0.62
CDK5RAP3-218ENST00000580391 BMI1P35226 326 aa11.21□□□□□ -0.62
CDK5RAP3-218ENST00000580391 DEFB1P60022 68 aa11.21□□□□□ -0.62
CDK5RAP3-218ENST00000580391 RPL19P84098 196 aaKnown RBP11.21□□□□□ -0.62
CDK5RAP3-218ENST00000580391 SRSF2Q01130 221 aaKnown RBP11.21□□□□□ -0.62
CDK5RAP3-218ENST00000580391 TSKUQ8WUA8 353 aa11.21□□□□□ -0.62
CDK5RAP3-218ENST00000580391 A0A1W2PRX2 142 aa11.2□□□□□ -0.62
CDK5RAP3-218ENST00000580391 HIST1H2BKO60814 126 aa11.2□□□□□ -0.62
CDK5RAP3-218ENST00000580391 HIST1H2BJP06899 126 aa11.2□□□□□ -0.62
CDK5RAP3-218ENST00000580391 CT45A10P0DMU9 189 aa11.2□□□□□ -0.62
CDK5RAP3-218ENST00000580391 HIST1H2BOP23527 126 aa11.2□□□□□ -0.62
CDK5RAP3-218ENST00000580391 HIST1H2BBP33778 126 aa11.2□□□□□ -0.62
CDK5RAP3-218ENST00000580391 HIST1H2BDP58876 126 aa11.2□□□□□ -0.62
CDK5RAP3-218ENST00000580391 HIST1H2BCP62807 126 aa11.2□□□□□ -0.62
CDK5RAP3-218ENST00000580391 HIST2H2BEQ16778 126 aa11.2□□□□□ -0.62
CDK5RAP3-218ENST00000580391 ACTL10Q5JWF8 245 aa11.2□□□□□ -0.62
CDK5RAP3-218ENST00000580391 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-218ENST00000580391 OR1N2Q8NGR9 330 aa11.2□□□□□ -0.62
CDK5RAP3-218ENST00000580391 DPF1Q92782 380 aa11.2□□□□□ -0.62
CDK5RAP3-218ENST00000580391 HIST1H2BHQ93079 126 aa11.2□□□□□ -0.62
CDK5RAP3-218ENST00000580391 HIST1H2BNQ99877 126 aa11.2□□□□□ -0.62
CDK5RAP3-218ENST00000580391 HIST1H2BMQ99879 126 aa11.2□□□□□ -0.62
CDK5RAP3-218ENST00000580391 CLEC5AQ9NY25 188 aa11.2□□□□□ -0.62
CDK5RAP3-218ENST00000580391 HAX1O00165 279 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 TRGC1P0CF51 173 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 ZNF705DP0CH99 300 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 ZNF705BP0CI00 300 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 FOSL1P15407 271 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 CBLN1P23435 193 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 CT83Q5H943 113 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 SAPCD1Q5SSQ6 148 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 MRPL54Q6P161 138 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 ADAMTSL5Q6ZMM2 481 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 COX8CQ7Z4L0 72 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 NUP35Q8NFH5 326 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 OR2D3Q8NGH3 330 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 DCANP1Q8TF63 244 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 JMJD8Q96S16 334 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 AGPAT4-IT1Q9H0P7 198 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 IZUMO1RA6ND01 250 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 HIGD1CA8MV81 97 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 GZMBP10144 247 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 ZNF80P51504 273 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 WFDC3Q8IUB2 231 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 NDFIP1Q9BT67 221 aa11.19□□□□□ -0.62
CDK5RAP3-218ENST00000580391 A8MWL6 223 aa11.18□□□□□ -0.62
CDK5RAP3-218ENST00000580391 SH2D1AO60880 128 aa11.18□□□□□ -0.62
CDK5RAP3-218ENST00000580391 NDUFA7O95182 113 aa11.18□□□□□ -0.62
CDK5RAP3-218ENST00000580391 FABP9Q0Z7S8 132 aa11.18□□□□□ -0.62
CDK5RAP3-218ENST00000580391 TMEM78Q5T7P6 136 aa11.18□□□□□ -0.62
CDK5RAP3-218ENST00000580391 OR4B1Q8NGF8 309 aa11.18□□□□□ -0.62
CDK5RAP3-218ENST00000580391 GTSF1Q8WW33 167 aa11.18□□□□□ -0.62
CDK5RAP3-218ENST00000580391 CITED2Q99967 270 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-218ENST00000580391 MS4A6AQ9H2W1 248 aa11.18□□□□□ -0.62
CDK5RAP3-218ENST00000580391 NAT8BQ9UHF3 227 aa11.18□□□□□ -0.62
CDK5RAP3-218ENST00000580391 S100A6P06703 90 aa11.17□□□□□ -0.62
CDK5RAP3-218ENST00000580391 TFPI2P48307 235 aa11.17□□□□□ -0.62
CDK5RAP3-218ENST00000580391 SNRPEP62304 92 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-218ENST00000580391 C9orf47Q6ZRZ4 202 aa11.17□□□□□ -0.62
CDK5RAP3-218ENST00000580391 DLX4Q92988 240 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-218ENST00000580391 RAX2Q96IS3 184 aa11.17□□□□□ -0.62
CDK5RAP3-218ENST00000580391 SAV1Q9H4B6 383 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-218ENST00000580391 TRAPPC1Q9Y5R8 145 aa11.17□□□□□ -0.62
CDK5RAP3-218ENST00000580391 F8P00451 2351 aa11.17□□□□□ -0.62
CDK5RAP3-218ENST00000580391 F6UB75 175 aa11.17□□□□□ -0.62
CDK5RAP3-218ENST00000580391 ZNF138P52744 262 aa11.17□□□□□ -0.62
CDK5RAP3-218ENST00000580391 FAM162BQ5T6X4 162 aa11.17□□□□□ -0.62
CDK5RAP3-218ENST00000580391 RNF114Q9Y508 228 aa11.17□□□□□ -0.62
CDK5RAP3-218ENST00000580391 C2CD3Q4AC94 2353 aa11.16□□□□□ -0.62
CDK5RAP3-218ENST00000580391 SNURFLB1AK76 121 aa11.16□□□□□ -0.62
CDK5RAP3-218ENST00000580391 OR9G4Q8NGQ1 327 aa11.16□□□□□ -0.62
CDK5RAP3-218ENST00000580391 WFDC12Q8WWY7 111 aa11.16□□□□□ -0.62
CDK5RAP3-218ENST00000580391 PROK1P58294 105 aa11.16□□□□□ -0.62
CDK5RAP3-218ENST00000580391 SORL1Q92673 2214 aa11.15□□□□□ -0.62
CDK5RAP3-218ENST00000580391 TMSB15BA0A087X1C1 80 aa11.15□□□□□ -0.62
CDK5RAP3-218ENST00000580391 C5orf52A6NGY3 159 aa11.15□□□□□ -0.62
CDK5RAP3-218ENST00000580391 M0QZ24 198 aa11.15□□□□□ -0.62
CDK5RAP3-218ENST00000580391 OVOL1O14753 267 aa11.15□□□□□ -0.62
CDK5RAP3-218ENST00000580391 TCF21O43680 179 aa11.15□□□□□ -0.62
CDK5RAP3-218ENST00000580391 NDUFA6P56556 154 aa11.15□□□□□ -0.62
CDK5RAP3-218ENST00000580391 FHL3Q13643 280 aa11.15□□□□□ -0.62
CDK5RAP3-218ENST00000580391 PGLYRP4Q96LB8 373 aa11.15□□□□□ -0.62
CDK5RAP3-218ENST00000580391 GFRA4Q9GZZ7 299 aa11.15□□□□□ -0.62
CDK5RAP3-218ENST00000580391 TSSC4Q9Y5U2 329 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-218ENST00000580391 AGRNO00468 2067 aa11.15□□□□□ -0.63
CDK5RAP3-218ENST00000580391 ZNF688P0C7X2 276 aa11.14□□□□□ -0.63
CDK5RAP3-218ENST00000580391 HIST1H1AQ02539 215 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-218ENST00000580391 TMEM136Q6ZRR5 245 aa11.14□□□□□ -0.63
CDK5RAP3-218ENST00000580391 OR8A1Q8NGG7 326 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms