RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 FAM19A4Q96LR4 140 aa13.3□□□□□ -0.28
PPP4R1-215ENST00000580182 LINC00477Q96M19 166 aa13.3□□□□□ -0.28
PPP4R1-215ENST00000580182 DEFB131BA0A096LNP1 70 aa13.29□□□□□ -0.28
PPP4R1-215ENST00000580182 BORCS7-ASMTA0A0B4J1R7 106 aa13.29□□□□□ -0.28
PPP4R1-215ENST00000580182 TRAV12-3A0A0B4J271 114 aa13.29□□□□□ -0.28
PPP4R1-215ENST00000580182 SERF2P84101 59 aa13.29□□□□□ -0.28
PPP4R1-215ENST00000580182 PQLC2Q6ZP29 291 aa13.29□□□□□ -0.28
PPP4R1-215ENST00000580182 LYPD1Q8N2G4 141 aa13.29□□□□□ -0.28
PPP4R1-215ENST00000580182 RAB24Q969Q5 203 aa13.29□□□□□ -0.28
PPP4R1-215ENST00000580182 NIPSNAP3BQ9BS92 247 aa13.29□□□□□ -0.28
PPP4R1-215ENST00000580182 CYTL1Q9NRR1 136 aa13.29□□□□□ -0.28
PPP4R1-215ENST00000580182 APLNQ9ULZ1 77 aa13.29□□□□□ -0.28
PPP4R1-215ENST00000580182 H7BYZ3 331 aa13.28□□□□□ -0.28
PPP4R1-215ENST00000580182 STAG3L2P0CL84 134 aa13.28□□□□□ -0.28
PPP4R1-215ENST00000580182 STAG3L3P0CL85 134 aa13.28□□□□□ -0.28
PPP4R1-215ENST00000580182 ARL14EPLP0DKL9 152 aa13.28□□□□□ -0.28
PPP4R1-215ENST00000580182 SSX7Q7RTT5 188 aa13.28□□□□□ -0.28
PPP4R1-215ENST00000580182 OR11H4Q8NGC9 324 aa13.28□□□□□ -0.28
PPP4R1-215ENST00000580182 C20orf144Q9BQM9 153 aa13.28□□□□□ -0.28
PPP4R1-215ENST00000580182 VPS13DQ5THJ4 4388 aa13.28□□□□□ -0.28
PPP4R1-215ENST00000580182 PGPA6NDG6 321 aa13.27□□□□□ -0.29
PPP4R1-215ENST00000580182 CD300CQ08708 224 aa13.27□□□□□ -0.29
PPP4R1-215ENST00000580182 BTN1A1Q13410 526 aa13.27□□□□□ -0.29
PPP4R1-215ENST00000580182 TMEM78Q5T7P6 136 aa13.27□□□□□ -0.29
PPP4R1-215ENST00000580182 Q8TAT8 98 aa13.27□□□□□ -0.29
PPP4R1-215ENST00000580182 GNPNAT1Q96EK6 184 aaPredicted RBP13.27□□□□□ -0.29
PPP4R1-215ENST00000580182 HYLS1Q96M11 299 aa13.27□□□□□ -0.29
PPP4R1-215ENST00000580182 IGHV4-4A0A075B6R2 117 aa13.26□□□□□ -0.29
PPP4R1-215ENST00000580182 TEX48A0A1B0GUV7 120 aa13.26□□□□□ -0.29
PPP4R1-215ENST00000580182 KLLNB2CW77 178 aa13.26□□□□□ -0.29
PPP4R1-215ENST00000580182 DIRC3C9JPN6 131 aa13.26□□□□□ -0.29
PPP4R1-215ENST00000580182 MBP02144 154 aa13.26□□□□□ -0.29
PPP4R1-215ENST00000580182 SLC25A5P05141 298 aaKnown RBP13.26□□□□□ -0.29
PPP4R1-215ENST00000580182 CSN1S1P47710 185 aa13.26□□□□□ -0.29
PPP4R1-215ENST00000580182 PRR9Q5T870 116 aa13.26□□□□□ -0.29
PPP4R1-215ENST00000580182 RNASE8Q8TDE3 154 aaKnown RBP13.26□□□□□ -0.29
PPP4R1-215ENST00000580182 C16orf74Q96GX8 76 aa13.26□□□□□ -0.29
PPP4R1-215ENST00000580182 OTORQ9NRC9 128 aa13.26□□□□□ -0.29
PPP4R1-215ENST00000580182 ZNF492Q9P255 531 aa13.26□□□□□ -0.29
PPP4R1-215ENST00000580182 C7orf71A4D174 169 aa13.25□□□□□ -0.29
PPP4R1-215ENST00000580182 HTN3P15516 51 aa13.25□□□□□ -0.29
PPP4R1-215ENST00000580182 CRISP2P16562 243 aa13.25□□□□□ -0.29
PPP4R1-215ENST00000580182 RNASE4P34096 147 aaKnown RBP13.25□□□□□ -0.29
PPP4R1-215ENST00000580182 DAD1P61803 113 aa13.25□□□□□ -0.29
PPP4R1-215ENST00000580182 Q6ZQT7 251 aa13.25□□□□□ -0.29
PPP4R1-215ENST00000580182 ZFAND2AQ8N6M9 145 aa13.25□□□□□ -0.29
PPP4R1-215ENST00000580182 ACTR3CQ9C0K3 210 aaPredicted RBP13.25□□□□□ -0.29
PPP4R1-215ENST00000580182 RPH3ALQ9UNE2 315 aa13.25□□□□□ -0.29
PPP4R1-215ENST00000580182 LYRM9A8MSI8 78 aa13.24□□□□□ -0.29
PPP4R1-215ENST00000580182 TAAR5O14804 337 aa13.24□□□□□ -0.29
PPP4R1-215ENST00000580182 ZNF324O75467 553 aaPredicted RBP13.24□□□□□ -0.29
PPP4R1-215ENST00000580182 GPX1P07203 203 aa13.24□□□□□ -0.29
PPP4R1-215ENST00000580182 GCHFRP30047 84 aa13.24□□□□□ -0.29
PPP4R1-215ENST00000580182 ZNF138P52744 262 aa13.24□□□□□ -0.29
PPP4R1-215ENST00000580182 ZNF726P1Q15940 193 aa13.24□□□□□ -0.29
PPP4R1-215ENST00000580182 TMEM263Q8WUH6 116 aaKnown RBP13.24□□□□□ -0.29
PPP4R1-215ENST00000580182 RBAKDNA6NC62 111 aa13.23□□□□□ -0.29
PPP4R1-215ENST00000580182 DEFB130BP0DP73 79 aa13.23□□□□□ -0.29
PPP4R1-215ENST00000580182 DEFB130AP0DP74 79 aa13.23□□□□□ -0.29
PPP4R1-215ENST00000580182 TCTAP57738 103 aa13.23□□□□□ -0.29
PPP4R1-215ENST00000580182 GNG5P63218 68 aa13.23□□□□□ -0.29
PPP4R1-215ENST00000580182 ZNF493Q6ZR52 646 aa13.23□□□□□ -0.29
PPP4R1-215ENST00000580182 KCNRGQ8N5I3 272 aa13.23□□□□□ -0.29
PPP4R1-215ENST00000580182 SUN5Q8TC36 379 aa13.23□□□□□ -0.29
PPP4R1-215ENST00000580182 RXFP4Q8TDU9 374 aa13.23□□□□□ -0.29
PPP4R1-215ENST00000580182 NOP10Q9NPE3 64 aaKnown RBP13.23□□□□□ -0.29
PPP4R1-215ENST00000580182 KMT2AQ03164 3969 aa13.22□□□□□ -0.29
PPP4R1-215ENST00000580182 LGALS9CQ6DKI2 356 aa13.22□□□□□ -0.29
PPP4R1-215ENST00000580182 CCDC28AQ8IWP9 274 aa13.22□□□□□ -0.29
PPP4R1-215ENST00000580182 CMTM2Q8TAZ6 248 aa13.22□□□□□ -0.29
PPP4R1-215ENST00000580182 ARPC5LQ9BPX5 153 aa13.22□□□□□ -0.29
PPP4R1-215ENST00000580182 PYGO2Q9BRQ0 406 aa13.22□□□□□ -0.29
PPP4R1-215ENST00000580182 TIMM8BQ9Y5J9 83 aaPredicted RBP13.22□□□□□ -0.29
PPP4R1-215ENST00000580182 HMSDA8MTL9 139 aa13.21□□□□□ -0.29
PPP4R1-215ENST00000580182 CXorf1O96002 111 aa13.21□□□□□ -0.29
PPP4R1-215ENST00000580182 NMBP08949 121 aa13.21□□□□□ -0.29
PPP4R1-215ENST00000580182 ZNF345Q14585 488 aa13.21□□□□□ -0.29
PPP4R1-215ENST00000580182 FAM74A1Q5RGS3 127 aa13.21□□□□□ -0.29
PPP4R1-215ENST00000580182 GOLT1AQ6ZVE7 132 aa13.21□□□□□ -0.29
PPP4R1-215ENST00000580182 AKR1C8PQ5T2L2 129 aa13.2□□□□□ -0.3
PPP4R1-215ENST00000580182 IQCF2Q8IXL9 164 aa13.2□□□□□ -0.3
PPP4R1-215ENST00000580182 ST6GAL2Q96JF0 529 aa13.2□□□□□ -0.3
PPP4R1-215ENST00000580182 TMPRSS5Q9H3S3 457 aa13.2□□□□□ -0.3
PPP4R1-215ENST00000580182 TRAV8-1A0A0A6YYK1 113 aa13.19□□□□□ -0.3
PPP4R1-215ENST00000580182 CTXND1A0A1B0GTU2 59 aa13.19□□□□□ -0.3
PPP4R1-215ENST00000580182 Q6ZNX1 250 aa13.19□□□□□ -0.3
PPP4R1-215ENST00000580182 SGK494Q96LW2 274 aa13.19□□□□□ -0.3
PPP4R1-215ENST00000580182 NDUFAF3Q9BU61 184 aa13.19□□□□□ -0.3
PPP4R1-215ENST00000580182 TMEM167BQ9NRX6 74 aa13.19□□□□□ -0.3
PPP4R1-215ENST00000580182 TP53TG3Q9ULZ0 132 aa13.19□□□□□ -0.3
PPP4R1-215ENST00000580182 TRBV7-9A0A0J9YWB2 115 aa13.18□□□□□ -0.3
PPP4R1-215ENST00000580182 FGF8P55075 233 aaPredicted RBP13.18□□□□□ -0.3
PPP4R1-215ENST00000580182 EIF4E3Q8N5X7 224 aaKnown RBP13.18□□□□□ -0.3
PPP4R1-215ENST00000580182 LINC00467Q9BRT7 94 aa13.18□□□□□ -0.3
PPP4R1-215ENST00000580182 A0A0D9SG52 128 aa13.17□□□□□ -0.3
PPP4R1-215ENST00000580182 CBY3A6NI87 242 aa13.17□□□□□ -0.3
PPP4R1-215ENST00000580182 SNURFLB1AK76 121 aa13.17□□□□□ -0.3
PPP4R1-215ENST00000580182 GGTLC3B5MD39 225 aa13.17□□□□□ -0.3
PPP4R1-215ENST00000580182 BCL2L11O43521 198 aa13.17□□□□□ -0.3
PPP4R1-215ENST00000580182 SUMO1P63165 101 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms