RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 IGKV2-24A0A0C4DH68 120 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 LINC00854A0A1B0GVQ3 168 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 C5orf52A6NGY3 159 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 KLLNB2CW77 178 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 MS4A2Q01362 244 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 ARL6IP1Q15041 203 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 AQP12AQ8IXF9 295 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 CANT1Q8WVQ1 401 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 CIB1Q99828 191 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 PPDPFQ9H3Y8 114 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 LINC00474Q9P2X8 69 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 TMEM272A0A1B0GTI8 110 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 hDV102S1A0JD36 115 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 MT-ND6P03923 174 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 IGLV7-43P04211 117 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 S100A7P31151 101 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 ZNF90Q03938 601 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 EXTL2Q9UBQ6 330 aa3.48□□□□□ -1.85
CCDC178-209ENST00000579947 SNRPGP15A8MWD9 76 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 CASQ2O14958 399 aaPredicted RBP3.47□□□□□ -1.85
CCDC178-209ENST00000579947 CFDP00746 253 aaPredicted RBP3.47□□□□□ -1.85
CCDC178-209ENST00000579947 IGKV1-39P01597 117 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 IGKV1D-39P04432 117 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 CXCL2P19875 107 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 HLA-DMAP28067 261 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 RPS25P62851 125 aaKnown RBP3.47□□□□□ -1.85
CCDC178-209ENST00000579947 DEFB107AQ8IZN7 70 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 OR4D10Q8NGI6 311 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 GFI1Q99684 422 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 IGHV3-16A0A0C4DH30 117 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 CIDEAO60543 219 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 FKBP6O75344 327 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 CRPP02741 224 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 FXYD4P59646 89 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 OPCMLQ14982 345 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 ARRDC1Q8N5I2 433 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 PRSS3P2Q8NHM4 247 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 FAM3DQ96BQ1 224 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 PDCD10Q9BUL8 212 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 SAMD10Q9BYL1 202 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 PLGRKTQ9HBL7 147 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 ELF5Q9UKW6 265 aaPredicted RBP3.47□□□□□ -1.85
CCDC178-209ENST00000579947 FAM25EA8MYX2 175 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 PRAC2D3DTV9 90 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 SUMO2P61956 95 aaKnown RBP3.47□□□□□ -1.85
CCDC178-209ENST00000579947 SS18Q15532 418 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 MIAQ16674 131 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 C1orf137Q5JT78 98 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 LINC00337Q8N6G1 96 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 CYB561D1Q8N8Q1 229 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 ZNF485Q8NCK3 441 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 FAM19A4Q96LR4 140 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 Q9UF83 564 aa3.47□□□□□ -1.85
CCDC178-209ENST00000579947 A0A096LNI7 61 aa3.46□□□□□ -1.86
CCDC178-209ENST00000579947 FBLL1A6NHQ2 334 aaKnown RBP3.46□□□□□ -1.86
CCDC178-209ENST00000579947 CRYM-AS1A6NIL9 109 aa3.46□□□□□ -1.86
CCDC178-209ENST00000579947 G3V2T6 193 aa3.46□□□□□ -1.86
CCDC178-209ENST00000579947 RAB31Q13636 194 aa3.46□□□□□ -1.86
CCDC178-209ENST00000579947 TMEM170AQ8WVE7 144 aa3.46□□□□□ -1.86
CCDC178-209ENST00000579947 ZFP92A6NM28 416 aa3.46□□□□□ -1.86
CCDC178-209ENST00000579947 VCYO14598 125 aa3.46□□□□□ -1.86
CCDC178-209ENST00000579947 RPL7P18124 248 aaKnown RBP3.46□□□□□ -1.86
CCDC178-209ENST00000579947 CTAG1AP78358 180 aa3.46□□□□□ -1.86
CCDC178-209ENST00000579947 KLF9Q13886 244 aaPredicted RBP3.46□□□□□ -1.86
CCDC178-209ENST00000579947 KCNIP4Q6PIL6 250 aa3.46□□□□□ -1.86
CCDC178-209ENST00000579947 LINC00173Q6ZV60 143 aa3.46□□□□□ -1.86
CCDC178-209ENST00000579947 LGI3Q8N145 548 aa3.46□□□□□ -1.86
CCDC178-209ENST00000579947 SSR3Q9UNL2 185 aa3.46□□□□□ -1.86
CCDC178-209ENST00000579947 A0A087WX48 190 aa3.45□□□□□ -1.86
CCDC178-209ENST00000579947 H3BRN7 92 aa3.45□□□□□ -1.86
CCDC178-209ENST00000579947 KRTAP13-3Q3SY46 172 aa3.45□□□□□ -1.86
CCDC178-209ENST00000579947 MRGPRFQ96AM1 343 aa3.45□□□□□ -1.86
CCDC178-209ENST00000579947 TRGV9Q99603 122 aa3.45□□□□□ -1.86
CCDC178-209ENST00000579947 RPP21Q9H633 154 aaKnown RBP3.45□□□□□ -1.86
CCDC178-209ENST00000579947 PKIGQ9Y2B9 76 aa3.45□□□□□ -1.86
CCDC178-209ENST00000579947 LRRC20Q8TCA0 184 aa3.45□□□□□ -1.86
CCDC178-209ENST00000579947 C9orf85Q96MD7 179 aa3.45□□□□□ -1.86
CCDC178-209ENST00000579947 SLC50A1Q9BRV3 221 aa3.45□□□□□ -1.86
CCDC178-209ENST00000579947 SSX5O60225 188 aa3.44□□□□□ -1.86
CCDC178-209ENST00000579947 RNASE4P34096 147 aaKnown RBP3.44□□□□□ -1.86
CCDC178-209ENST00000579947 TMEM17Q86X19 198 aa3.44□□□□□ -1.86
CCDC178-209ENST00000579947 KRTAP9-8Q9BYQ0 159 aa3.44□□□□□ -1.86
CCDC178-209ENST00000579947 NAA50Q9GZZ1 169 aaKnown RBP3.44□□□□□ -1.86
CCDC178-209ENST00000579947 OR4E1P0C645 316 aa3.44□□□□□ -1.86
CCDC178-209ENST00000579947 HERV-K104P61576 105 aa3.44□□□□□ -1.86
CCDC178-209ENST00000579947 IZUMO4Q1ZYL8 232 aa3.44□□□□□ -1.86
CCDC178-209ENST00000579947 CDNFQ49AH0 187 aa3.44□□□□□ -1.86
CCDC178-209ENST00000579947 GGNBP1Q5YKI7 109 aa3.44□□□□□ -1.86
CCDC178-209ENST00000579947 GPN1Q9HCN4 374 aaPredicted RBP3.44□□□□□ -1.86
CCDC178-209ENST00000579947 AMBNQ9NP70 447 aa3.44□□□□□ -1.86
CCDC178-209ENST00000579947 ZNF331Q9NQX6 463 aaPredicted RBP3.44□□□□□ -1.86
CCDC178-209ENST00000579947 ANKRD65E5RJM6 399 aa3.43□□□□□ -1.86
CCDC178-209ENST00000579947 NMBP08949 121 aa3.43□□□□□ -1.86
CCDC178-209ENST00000579947 CRISP2P16562 243 aa3.43□□□□□ -1.86
CCDC178-209ENST00000579947 SPCS3P61009 180 aa3.43□□□□□ -1.86
CCDC178-209ENST00000579947 NMSQ5H8A3 153 aa3.43□□□□□ -1.86
CCDC178-209ENST00000579947 NUDCD2Q8WVJ2 157 aa3.43□□□□□ -1.86
CCDC178-209ENST00000579947 SHANK2-AS3Q9BTD1 123 aa3.43□□□□□ -1.86
CCDC178-209ENST00000579947 TMEM147Q9BVK8 224 aa3.43□□□□□ -1.86
CCDC178-209ENST00000579947 TRGV11A0A075B6L2 103 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms