RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 FAM222AQ5U5X8 452 aa10.33□□□□□ -0.76
MKS1-207ENST00000578789 C2CD4CQ8TF44 421 aa10.33□□□□□ -0.76
MKS1-207ENST00000578789 LINC01587Q99440 93 aa10.33□□□□□ -0.76
MKS1-207ENST00000578789 AGPAT4-IT1Q9H0P7 198 aa10.33□□□□□ -0.76
MKS1-207ENST00000578789 YTHDF2Q9Y5A9 579 aaKnown RBP10.33□□□□□ -0.76
MKS1-207ENST00000578789 IGKV2-40A0A087WW87 121 aaPredicted RBP10.32□□□□□ -0.76
MKS1-207ENST00000578789 PLAC8L1A1L4L8 177 aa10.32□□□□□ -0.76
MKS1-207ENST00000578789 KLLNB2CW77 178 aa10.32□□□□□ -0.76
MKS1-207ENST00000578789 H7BYZ3 331 aa10.32□□□□□ -0.76
MKS1-207ENST00000578789 IGKV2D-40P01614 121 aaPredicted RBP10.32□□□□□ -0.76
MKS1-207ENST00000578789 PRM2P04554 102 aa10.32□□□□□ -0.76
MKS1-207ENST00000578789 CRISP2P16562 243 aa10.32□□□□□ -0.76
MKS1-207ENST00000578789 TCTAP57738 103 aa10.32□□□□□ -0.76
MKS1-207ENST00000578789 ZNF767PQ75MW2 155 aa10.32□□□□□ -0.76
MKS1-207ENST00000578789 LINC00476Q8WZB0 136 aa10.32□□□□□ -0.76
MKS1-207ENST00000578789 RAB24Q969Q5 203 aa10.32□□□□□ -0.76
MKS1-207ENST00000578789 OTORQ9NRC9 128 aa10.32□□□□□ -0.76
MKS1-207ENST00000578789 CYTL1Q9NRR1 136 aa10.32□□□□□ -0.76
MKS1-207ENST00000578789 RBAKDNA6NC62 111 aa10.31□□□□□ -0.76
MKS1-207ENST00000578789 HMSDA8MTL9 139 aa10.31□□□□□ -0.76
MKS1-207ENST00000578789 SLC25A5P05141 298 aaKnown RBP10.31□□□□□ -0.76
MKS1-207ENST00000578789 NMBP08949 121 aa10.31□□□□□ -0.76
MKS1-207ENST00000578789 ARL14EPLP0DKL9 152 aa10.31□□□□□ -0.76
MKS1-207ENST00000578789 CSN1S1P47710 185 aa10.31□□□□□ -0.76
MKS1-207ENST00000578789 TMEM78Q5T7P6 136 aa10.31□□□□□ -0.76
MKS1-207ENST00000578789 KCNRGQ8N5I3 272 aa10.31□□□□□ -0.76
MKS1-207ENST00000578789 OR11H4Q8NGC9 324 aa10.31□□□□□ -0.76
MKS1-207ENST00000578789 SUN5Q8TC36 379 aa10.31□□□□□ -0.76
MKS1-207ENST00000578789 C16orf74Q96GX8 76 aa10.31□□□□□ -0.76
MKS1-207ENST00000578789 VGLL1Q99990 258 aa10.31□□□□□ -0.76
MKS1-207ENST00000578789 NIPSNAP3BQ9BS92 247 aa10.31□□□□□ -0.76
MKS1-207ENST00000578789 ZNF492Q9P255 531 aa10.31□□□□□ -0.76
MKS1-207ENST00000578789 TRBV7-9A0A0J9YWB2 115 aa10.3□□□□□ -0.76
MKS1-207ENST00000578789 C7orf71A4D174 169 aa10.3□□□□□ -0.76
MKS1-207ENST00000578789 LYRM9A8MSI8 78 aa10.3□□□□□ -0.76
MKS1-207ENST00000578789 DIRC3C9JPN6 131 aa10.3□□□□□ -0.76
MKS1-207ENST00000578789 HMGB3O15347 200 aaKnown RBP10.3□□□□□ -0.76
MKS1-207ENST00000578789 AZU1P20160 251 aa10.3□□□□□ -0.76
MKS1-207ENST00000578789 ZNF493Q6ZR52 646 aa10.3□□□□□ -0.76
MKS1-207ENST00000578789 ARL6IP6Q8N6S5 226 aa10.3□□□□□ -0.76
MKS1-207ENST00000578789 RNASE8Q8TDE3 154 aaKnown RBP10.3□□□□□ -0.76
MKS1-207ENST00000578789 RXFP4Q8TDU9 374 aa10.3□□□□□ -0.76
MKS1-207ENST00000578789 ACTR3CQ9C0K3 210 aaPredicted RBP10.3□□□□□ -0.76
MKS1-207ENST00000578789 DEFB131BA0A096LNP1 70 aa10.29□□□□□ -0.76
MKS1-207ENST00000578789 J3KRW8 73 aa10.29□□□□□ -0.76
MKS1-207ENST00000578789 GCHFRP30047 84 aa10.29□□□□□ -0.76
MKS1-207ENST00000578789 FAM74A1Q5RGS3 127 aa10.29□□□□□ -0.76
MKS1-207ENST00000578789 SSX7Q7RTT5 188 aa10.29□□□□□ -0.76
MKS1-207ENST00000578789 ZFAND2AQ8N6M9 145 aa10.29□□□□□ -0.76
MKS1-207ENST00000578789 TMEM263Q8WUH6 116 aaKnown RBP10.29□□□□□ -0.76
MKS1-207ENST00000578789 ARPC5LQ9BPX5 153 aa10.29□□□□□ -0.76
MKS1-207ENST00000578789 HYDINQ4G0P3 5121 aa10.29□□□□□ -0.76
MKS1-207ENST00000578789 TRAV12-3A0A0B4J271 114 aa10.28□□□□□ -0.76
MKS1-207ENST00000578789 PGPA6NDG6 321 aa10.28□□□□□ -0.76
MKS1-207ENST00000578789 CXorf1O96002 111 aa10.28□□□□□ -0.76
MKS1-207ENST00000578789 ZNF138P52744 262 aa10.28□□□□□ -0.76
MKS1-207ENST00000578789 BTN1A1Q13410 526 aa10.28□□□□□ -0.76
MKS1-207ENST00000578789 ZNF726P1Q15940 193 aa10.28□□□□□ -0.76
MKS1-207ENST00000578789 Q6ZNX1 250 aa10.28□□□□□ -0.76
MKS1-207ENST00000578789 Q8TAT8 98 aa10.28□□□□□ -0.76
MKS1-207ENST00000578789 TMED6Q8WW62 240 aa10.28□□□□□ -0.76
MKS1-207ENST00000578789 PYGO2Q9BRQ0 406 aa10.28□□□□□ -0.76
MKS1-207ENST00000578789 LINC00467Q9BRT7 94 aa10.28□□□□□ -0.76
MKS1-207ENST00000578789 APLNQ9ULZ1 77 aa10.28□□□□□ -0.76
MKS1-207ENST00000578789 IGHV4-4A0A075B6R2 117 aa10.27□□□□□ -0.77
MKS1-207ENST00000578789 A0A0D9SG52 128 aa10.27□□□□□ -0.77
MKS1-207ENST00000578789 CTXND1A0A1B0GTU2 59 aa10.27□□□□□ -0.77
MKS1-207ENST00000578789 IGLL5B9A064 214 aa10.27□□□□□ -0.77
MKS1-207ENST00000578789 ZNF324O75467 553 aaPredicted RBP10.27□□□□□ -0.77
MKS1-207ENST00000578789 DAD1P61803 113 aa10.27□□□□□ -0.77
MKS1-207ENST00000578789 CD300CQ08708 224 aa10.27□□□□□ -0.77
MKS1-207ENST00000578789 AKR1C8PQ5T2L2 129 aa10.27□□□□□ -0.77
MKS1-207ENST00000578789 PRR9Q5T870 116 aa10.27□□□□□ -0.77
MKS1-207ENST00000578789 CMTM2Q8TAZ6 248 aa10.27□□□□□ -0.77
MKS1-207ENST00000578789 ST6GAL2Q96JF0 529 aa10.27□□□□□ -0.77
MKS1-207ENST00000578789 TMEM167BQ9NRX6 74 aa10.27□□□□□ -0.77
MKS1-207ENST00000578789 LENEPQ9Y5L5 61 aa10.27□□□□□ -0.77
MKS1-207ENST00000578789 BCL2L11O43521 198 aa10.26□□□□□ -0.77
MKS1-207ENST00000578789 GPX1P07203 203 aa10.26□□□□□ -0.77
MKS1-207ENST00000578789 HTN1P15515 57 aa10.26□□□□□ -0.77
MKS1-207ENST00000578789 LGALS9CQ6DKI2 356 aa10.26□□□□□ -0.77
MKS1-207ENST00000578789 CCDC28AQ8IWP9 274 aa10.26□□□□□ -0.77
MKS1-207ENST00000578789 HYLS1Q96M11 299 aa10.26□□□□□ -0.77
MKS1-207ENST00000578789 TIMM8BQ9Y5J9 83 aaPredicted RBP10.26□□□□□ -0.77
MKS1-207ENST00000578789 KANTRA0A1W2PQU2 76 aa10.25□□□□□ -0.77
MKS1-207ENST00000578789 LY6G6CO95867 125 aa10.25□□□□□ -0.77
MKS1-207ENST00000578789 RNASE4P34096 147 aaKnown RBP10.25□□□□□ -0.77
MKS1-207ENST00000578789 TCTE3Q8IZS6 198 aa10.25□□□□□ -0.77
MKS1-207ENST00000578789 C5orf17Q8NAS9 161 aa10.25□□□□□ -0.77
MKS1-207ENST00000578789 FAM210BQ96KR6 192 aa10.25□□□□□ -0.77
MKS1-207ENST00000578789 SERTM2A0A1B0GWG4 89 aa10.24□□□□□ -0.77
MKS1-207ENST00000578789 GGTLC3B5MD39 225 aa10.24□□□□□ -0.77
MKS1-207ENST00000578789 GNG5P63218 68 aa10.24□□□□□ -0.77
MKS1-207ENST00000578789 ANXA2RQ3ZCQ2 193 aa10.24□□□□□ -0.77
MKS1-207ENST00000578789 GOLT1AQ6ZVE7 132 aa10.24□□□□□ -0.77
MKS1-207ENST00000578789 LINC00612Q8N6U2 182 aa10.24□□□□□ -0.77
MKS1-207ENST00000578789 RPH3ALQ9UNE2 315 aa10.24□□□□□ -0.77
MKS1-207ENST00000578789 A0A1W2PRE2 83 aa10.23□□□□□ -0.77
MKS1-207ENST00000578789 TCRAP04437 139 aa10.23□□□□□ -0.77
MKS1-207ENST00000578789 SEC11BP0C7V7 166 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms