RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-209ENST00000578709 DIRC3C9JPN6 131 aa17.14■□□□□ 0.33
ERBB2-209ENST00000578709 SLC25A5P05141 298 aaKnown RBP17.14■□□□□ 0.33
ERBB2-209ENST00000578709 LEPP41159 167 aa17.14■□□□□ 0.33
ERBB2-209ENST00000578709 FAM19A4Q96LR4 140 aa17.14■□□□□ 0.33
ERBB2-209ENST00000578709 RBMY1A1P0DJD3 496 aaKnown RBP17.13■□□□□ 0.33
ERBB2-209ENST00000578709 RBMY1CP0DJD4 496 aa17.13■□□□□ 0.33
ERBB2-209ENST00000578709 FGF8P55075 233 aaPredicted RBP17.13■□□□□ 0.33
ERBB2-209ENST00000578709 RBMY1FQ15415 496 aaKnown RBP17.13■□□□□ 0.33
ERBB2-209ENST00000578709 TMEM78Q5T7P6 136 aa17.13■□□□□ 0.33
ERBB2-209ENST00000578709 EIF5AL1Q6IS14 154 aaKnown RBP17.13■□□□□ 0.33
ERBB2-209ENST00000578709 CMTM2Q8TAZ6 248 aa17.13■□□□□ 0.33
ERBB2-209ENST00000578709 IGHV3OR16-12A0A075B7B8 117 aa17.12■□□□□ 0.33
ERBB2-209ENST00000578709 IQCF2Q8IXL9 164 aa17.12■□□□□ 0.33
ERBB2-209ENST00000578709 FAM213BQ8TBF2 198 aa17.12■□□□□ 0.33
ERBB2-209ENST00000578709 MBD3L1Q8WWY6 194 aa17.12■□□□□ 0.33
ERBB2-209ENST00000578709 TMPRSS5Q9H3S3 457 aa17.12■□□□□ 0.33
ERBB2-209ENST00000578709 A0A1W2PRE2 83 aa17.11■□□□□ 0.33
ERBB2-209ENST00000578709 C3orf84H3BNL1 204 aa17.11■□□□□ 0.33
ERBB2-209ENST00000578709 DEFB4AO15263 64 aa17.11■□□□□ 0.33
ERBB2-209ENST00000578709 CRISP2P16562 243 aa17.11■□□□□ 0.33
ERBB2-209ENST00000578709 KIR3DS1Q14943 382 aa17.11■□□□□ 0.33
ERBB2-209ENST00000578709 TMEM256Q8N2U0 113 aa17.11■□□□□ 0.33
ERBB2-209ENST00000578709 IL17DQ8TAD2 202 aa17.11■□□□□ 0.33
ERBB2-209ENST00000578709 C20orf144Q9BQM9 153 aa17.11■□□□□ 0.33
ERBB2-209ENST00000578709 ZNF492Q9P255 531 aa17.11■□□□□ 0.33
ERBB2-209ENST00000578709 TRBV7-9A0A0J9YWB2 115 aa17.1■□□□□ 0.33
ERBB2-209ENST00000578709 GGTLC3B5MD39 225 aa17.1■□□□□ 0.33
ERBB2-209ENST00000578709 NMBP08949 121 aa17.1■□□□□ 0.33
ERBB2-209ENST00000578709 ZNF138P52744 262 aa17.1■□□□□ 0.33
ERBB2-209ENST00000578709 GFI1BQ5VTD9 330 aa17.1■□□□□ 0.33
ERBB2-209ENST00000578709 C5orf17Q8NAS9 161 aa17.1■□□□□ 0.33
ERBB2-209ENST00000578709 TMEM208Q9BTX3 173 aa17.1■□□□□ 0.33
ERBB2-209ENST00000578709 KLLNB2CW77 178 aa17.09■□□□□ 0.33
ERBB2-209ENST00000578709 RAB5CP51148 216 aa17.09■□□□□ 0.33
ERBB2-209ENST00000578709 HBE1P02100 147 aa17.08■□□□□ 0.32
ERBB2-209ENST00000578709 SUMO1P63165 101 aaKnown RBP17.08■□□□□ 0.32
ERBB2-209ENST00000578709 GOLT1AQ6ZVE7 132 aa17.08■□□□□ 0.32
ERBB2-209ENST00000578709 SFT2D1Q8WV19 159 aa17.08■□□□□ 0.32
ERBB2-209ENST00000578709 YTHDF2Q9Y5A9 579 aaKnown RBP17.08■□□□□ 0.32
ERBB2-209ENST00000578709 SERTM2A0A1B0GWG4 89 aa17.07■□□□□ 0.32
ERBB2-209ENST00000578709 NKX2-5P52952 324 aaPredicted RBP17.07■□□□□ 0.32
ERBB2-209ENST00000578709 GNG5P63218 68 aa17.07■□□□□ 0.32
ERBB2-209ENST00000578709 RRN3P1Q2M238 152 aa17.07■□□□□ 0.32
ERBB2-209ENST00000578709 ZFAND2AQ8N6M9 145 aa17.07■□□□□ 0.32
ERBB2-209ENST00000578709 Q8TAT8 98 aa17.07■□□□□ 0.32
ERBB2-209ENST00000578709 NKX6-2Q9C056 277 aaPredicted RBP17.07■□□□□ 0.32
ERBB2-209ENST00000578709 RPH3ALQ9UNE2 315 aa17.07■□□□□ 0.32
ERBB2-209ENST00000578709 TMEM189A5PLL7 270 aa17.06■□□□□ 0.32
ERBB2-209ENST00000578709 FAM74A7A6NL05 159 aa17.06■□□□□ 0.32
ERBB2-209ENST00000578709 TCRAP04437 139 aa17.06■□□□□ 0.32
ERBB2-209ENST00000578709 H2AFB1P0C5Y9 115 aa17.06■□□□□ 0.32
ERBB2-209ENST00000578709 SULT1A2P50226 295 aa17.06■□□□□ 0.32
ERBB2-209ENST00000578709 UBE2G2P60604 165 aa17.06■□□□□ 0.32
ERBB2-209ENST00000578709 LINC01587Q99440 93 aa17.06■□□□□ 0.32
ERBB2-209ENST00000578709 EPDR1Q9UM22 224 aa17.06■□□□□ 0.32
ERBB2-209ENST00000578709 LENEPQ9Y5L5 61 aa17.06■□□□□ 0.32
ERBB2-209ENST00000578709 C7orf71A4D174 169 aa17.05■□□□□ 0.32
ERBB2-209ENST00000578709 H7BYZ3 331 aa17.05■□□□□ 0.32
ERBB2-209ENST00000578709 J3KRW8 73 aa17.05■□□□□ 0.32
ERBB2-209ENST00000578709 TAS2R60P59551 318 aa17.05■□□□□ 0.32
ERBB2-209ENST00000578709 ARL2-SNX15V9GYD0 113 aa17.05■□□□□ 0.32
ERBB2-209ENST00000578709 LOC102723971A0A1B0GUV8 181 aa17.04■□□□□ 0.32
ERBB2-209ENST00000578709 ZNF705GA8MUZ8 300 aaPredicted RBP17.04■□□□□ 0.32
ERBB2-209ENST00000578709 C11orf45Q8TAV5 145 aa17.04■□□□□ 0.32
ERBB2-209ENST00000578709 CSMD3Q7Z407 3707 aa17.04■□□□□ 0.32
ERBB2-209ENST00000578709 TRAV1-1A0A0B4J248 108 aa17.03■□□□□ 0.32
ERBB2-209ENST00000578709 TRAV12-3A0A0B4J271 114 aa17.03■□□□□ 0.32
ERBB2-209ENST00000578709 GPX1P07203 203 aa17.03■□□□□ 0.32
ERBB2-209ENST00000578709 CASC10Q5T4H9 136 aa17.03■□□□□ 0.32
ERBB2-209ENST00000578709 TRAV8-1A0A0A6YYK1 113 aa17.02■□□□□ 0.32
ERBB2-209ENST00000578709 K7EQM0 130 aa17.02■□□□□ 0.32
ERBB2-209ENST00000578709 ZNF324O75467 553 aaPredicted RBP17.02■□□□□ 0.32
ERBB2-209ENST00000578709 PRM2P04554 102 aa17.02■□□□□ 0.32
ERBB2-209ENST00000578709 RNASE4P34096 147 aaKnown RBP17.02■□□□□ 0.32
ERBB2-209ENST00000578709 BTN1A1Q13410 526 aa17.02■□□□□ 0.32
ERBB2-209ENST00000578709 PRR9Q5T870 116 aa17.02■□□□□ 0.32
ERBB2-209ENST00000578709 ZFAND6Q6FIF0 208 aa17.02■□□□□ 0.32
ERBB2-209ENST00000578709 CYB561D1Q8N8Q1 229 aa17.02■□□□□ 0.32
ERBB2-209ENST00000578709 NIPSNAP3BQ9BS92 247 aa17.02■□□□□ 0.32
ERBB2-209ENST00000578709 ATG101Q9BSB4 218 aa17.02■□□□□ 0.32
ERBB2-209ENST00000578709 CCDC28AQ8IWP9 274 aa17.01■□□□□ 0.31
ERBB2-209ENST00000578709 CELA1Q9UNI1 258 aa17.01■□□□□ 0.31
ERBB2-209ENST00000578709 A0A1B0GV50 99 aa17■□□□□ 0.31
ERBB2-209ENST00000578709 IFNA7P01567 189 aa17■□□□□ 0.31
ERBB2-209ENST00000578709 AZU1P20160 251 aa17■□□□□ 0.31
ERBB2-209ENST00000578709 NANOS2P60321 138 aaKnown RBP17■□□□□ 0.31
ERBB2-209ENST00000578709 PYGO2Q9BRQ0 406 aa17■□□□□ 0.31
ERBB2-209ENST00000578709 TCEAL7Q9BRU2 100 aa17■□□□□ 0.31
ERBB2-209ENST00000578709 BOLA1Q9Y3E2 137 aa17■□□□□ 0.31
ERBB2-209ENST00000578709 STARD9Q9P2P6 4700 aa17■□□□□ 0.31
ERBB2-209ENST00000578709 CXorf65A6NEN9 183 aa16.99■□□□□ 0.31
ERBB2-209ENST00000578709 FBLL1A6NHQ2 334 aaKnown RBP16.99■□□□□ 0.31
ERBB2-209ENST00000578709 IGLV2-11P01706 119 aa16.99■□□□□ 0.31
ERBB2-209ENST00000578709 PPT1P50897 306 aa16.99■□□□□ 0.31
ERBB2-209ENST00000578709 EMP1P54849 157 aa16.99■□□□□ 0.31
ERBB2-209ENST00000578709 TMEM75Q8N9X5 138 aa16.99■□□□□ 0.31
ERBB2-209ENST00000578709 HIST1H2BAQ96A08 127 aa16.99■□□□□ 0.31
ERBB2-209ENST00000578709 TVP23CQ96ET8 276 aa16.99■□□□□ 0.31
ERBB2-209ENST00000578709 LINC00467Q9BRT7 94 aa16.99■□□□□ 0.31
ERBB2-209ENST00000578709 TENM2Q9NT68 2774 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms