RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 ATP5G3P48201 142 aa16.17■□□□□ 0.18
VAPA-205ENST00000578314 RNF212Q495C1 297 aa16.17■□□□□ 0.18
VAPA-205ENST00000578314 FAM122CQ6P4D5 195 aa16.17■□□□□ 0.18
VAPA-205ENST00000578314 C15orf53Q8NAA6 179 aa16.17■□□□□ 0.18
VAPA-205ENST00000578314 ZNF503Q96F45 646 aa16.17■□□□□ 0.18
VAPA-205ENST00000578314 PYGO2Q9BRQ0 406 aa16.17■□□□□ 0.18
VAPA-205ENST00000578314 NMBP08949 121 aa16.16■□□□□ 0.18
VAPA-205ENST00000578314 CRISP2P16562 243 aa16.16■□□□□ 0.18
VAPA-205ENST00000578314 LINC00612Q8N6U2 182 aa16.16■□□□□ 0.18
VAPA-205ENST00000578314 C7orf71A4D174 169 aa16.15■□□□□ 0.18
VAPA-205ENST00000578314 F5H768 121 aa16.15■□□□□ 0.18
VAPA-205ENST00000578314 OR7C2O60412 319 aa16.15■□□□□ 0.18
VAPA-205ENST00000578314 ZNF324O75467 553 aaPredicted RBP16.15■□□□□ 0.18
VAPA-205ENST00000578314 LYPD1Q8N2G4 141 aa16.15■□□□□ 0.18
VAPA-205ENST00000578314 PHYHIPLQ96FC7 376 aa16.15■□□□□ 0.18
VAPA-205ENST00000578314 IGKV2-40A0A087WW87 121 aaPredicted RBP16.14■□□□□ 0.17
VAPA-205ENST00000578314 IGKV2D-40P01614 121 aaPredicted RBP16.14■□□□□ 0.17
VAPA-205ENST00000578314 TMEM78Q5T7P6 136 aa16.14■□□□□ 0.17
VAPA-205ENST00000578314 VGLL1Q99990 258 aa16.14■□□□□ 0.17
VAPA-205ENST00000578314 LINC00467Q9BRT7 94 aa16.14■□□□□ 0.17
VAPA-205ENST00000578314 MED28Q9H204 178 aa16.14■□□□□ 0.17
VAPA-205ENST00000578314 DNAH2Q9P225 4427 aa16.14■□□□□ 0.17
VAPA-205ENST00000578314 HERC2O95714 4834 aa16.14■□□□□ 0.17
VAPA-205ENST00000578314 TAS2R45P59539 299 aa16.13■□□□□ 0.17
VAPA-205ENST00000578314 CD300CQ08708 224 aa16.13■□□□□ 0.17
VAPA-205ENST00000578314 KHDC3LQ587J8 217 aa16.13■□□□□ 0.17
VAPA-205ENST00000578314 UBE2DNLQ8IWF7 75 aa16.13■□□□□ 0.17
VAPA-205ENST00000578314 ZNF492Q9P255 531 aa16.13■□□□□ 0.17
VAPA-205ENST00000578314 RANP62826 216 aaKnown RBP16.12■□□□□ 0.17
VAPA-205ENST00000578314 UBE2L3P68036 154 aaKnown RBP16.12■□□□□ 0.17
VAPA-205ENST00000578314 DAZ2Q13117 558 aaKnown RBP16.12■□□□□ 0.17
VAPA-205ENST00000578314 LGALS9BQ3B8N2 356 aa16.12■□□□□ 0.17
VAPA-205ENST00000578314 ZFAND2AQ8N6M9 145 aa16.12■□□□□ 0.17
VAPA-205ENST00000578314 TRBV7-9A0A0J9YWB2 115 aa16.11■□□□□ 0.17
VAPA-205ENST00000578314 SNURFLB1AK76 121 aa16.11■□□□□ 0.17
VAPA-205ENST00000578314 GPX1P07203 203 aa16.11■□□□□ 0.17
VAPA-205ENST00000578314 M6PRP20645 277 aa16.11■□□□□ 0.17
VAPA-205ENST00000578314 RNASE4P34096 147 aaKnown RBP16.11■□□□□ 0.17
VAPA-205ENST00000578314 BTN1A1Q13410 526 aa16.11■□□□□ 0.17
VAPA-205ENST00000578314 ACOT6Q3I5F7 207 aaPredicted RBP16.11■□□□□ 0.17
VAPA-205ENST00000578314 Q9H3A6 140 aa16.11■□□□□ 0.17
VAPA-205ENST00000578314 DNAH17Q9UFH2 4485 aa16.11■□□□□ 0.17
VAPA-205ENST00000578314 FAT2Q9NYQ8 4349 aa16.1■□□□□ 0.17
VAPA-205ENST00000578314 RBAKDNA6NC62 111 aa16.1■□□□□ 0.17
VAPA-205ENST00000578314 CSN1S1P47710 185 aa16.1■□□□□ 0.17
VAPA-205ENST00000578314 ZNF138P52744 262 aa16.1■□□□□ 0.17
VAPA-205ENST00000578314 ANXA2RQ3ZCQ2 193 aa16.1■□□□□ 0.17
VAPA-205ENST00000578314 FAM3BP58499 235 aaPredicted RBP16.09■□□□□ 0.17
VAPA-205ENST00000578314 C11orf72Q8NBR9 251 aa16.09■□□□□ 0.17
VAPA-205ENST00000578314 ZNF680Q8NEM1 530 aa16.09■□□□□ 0.17
VAPA-205ENST00000578314 ASB13Q8WXK3 278 aa16.09■□□□□ 0.17
VAPA-205ENST00000578314 AQP10Q96PS8 301 aa16.09■□□□□ 0.17
VAPA-205ENST00000578314 PRR9Q5T870 116 aa16.08■□□□□ 0.16
VAPA-205ENST00000578314 LINC00336Q6ZUF6 198 aa16.08■□□□□ 0.16
VAPA-205ENST00000578314 EIF4E3Q8N5X7 224 aaKnown RBP16.08■□□□□ 0.16
VAPA-205ENST00000578314 RXFP4Q8TDU9 374 aa16.08■□□□□ 0.16
VAPA-205ENST00000578314 A0A1W2PPV4 95 aa16.07■□□□□ 0.16
VAPA-205ENST00000578314 GAGE12BA1L429 117 aa16.07■□□□□ 0.16
VAPA-205ENST00000578314 M0R2N4 97 aa16.07■□□□□ 0.16
VAPA-205ENST00000578314 GAGE7O76087 117 aa16.07■□□□□ 0.16
VAPA-205ENST00000578314 GAGE12FP0CL80 117 aa16.07■□□□□ 0.16
VAPA-205ENST00000578314 GAGE12GP0CL81 117 aa16.07■□□□□ 0.16
VAPA-205ENST00000578314 GAGE12IP0CL82 117 aa16.07■□□□□ 0.16
VAPA-205ENST00000578314 ZNF266Q14584 549 aa16.07■□□□□ 0.16
VAPA-205ENST00000578314 Q5BKY6 102 aa16.07■□□□□ 0.16
VAPA-205ENST00000578314 PQLC2Q6ZP29 291 aa16.07■□□□□ 0.16
VAPA-205ENST00000578314 Q6ZR54 194 aa16.07■□□□□ 0.16
VAPA-205ENST00000578314 GSN-AS1Q9NRJ2 163 aa16.07■□□□□ 0.16
VAPA-205ENST00000578314 DIRC3C9JPN6 131 aa16.06■□□□□ 0.16
VAPA-205ENST00000578314 EIF3GO75821 320 aaKnown RBP eCLIP16.06■□□□□ 0.16
VAPA-205ENST00000578314 NUDT3O95989 172 aa16.06■□□□□ 0.16
VAPA-205ENST00000578314 GIPP09681 153 aaPredicted RBP16.06■□□□□ 0.16
VAPA-205ENST00000578314 RAB2AP61019 212 aa16.06■□□□□ 0.16
VAPA-205ENST00000578314 OR10G4Q8NGN3 311 aa16.06■□□□□ 0.16
VAPA-205ENST00000578314 OR10G9Q8NGN4 311 aa16.06■□□□□ 0.16
VAPA-205ENST00000578314 OR10G7Q8NGN6 311 aa16.06■□□□□ 0.16
VAPA-205ENST00000578314 OR2G3Q8NGZ4 309 aa16.06■□□□□ 0.16
VAPA-205ENST00000578314 IGLV2-18A0A075B6J9 118 aa16.05■□□□□ 0.16
VAPA-205ENST00000578314 Q6ZTI0 123 aa16.05■□□□□ 0.16
VAPA-205ENST00000578314 Q8TAT8 98 aa16.05■□□□□ 0.16
VAPA-205ENST00000578314 C18orf15Q96N68 181 aa16.05■□□□□ 0.16
VAPA-205ENST00000578314 OTORQ9NRC9 128 aa16.05■□□□□ 0.16
VAPA-205ENST00000578314 OR5I1Q13606 314 aa16.04■□□□□ 0.16
VAPA-205ENST00000578314 Q6ZQT7 251 aa16.04■□□□□ 0.16
VAPA-205ENST00000578314 ARL6IP6Q8N6S5 226 aa16.04■□□□□ 0.16
VAPA-205ENST00000578314 ATG101Q9BSB4 218 aa16.04■□□□□ 0.16
VAPA-205ENST00000578314 PSMG3Q9BT73 122 aaPredicted RBP16.04■□□□□ 0.16
VAPA-205ENST00000578314 LENEPQ9Y5L5 61 aa16.04■□□□□ 0.16
VAPA-205ENST00000578314 IGHV1OR15-1A0A075B7D0 117 aa16.03■□□□□ 0.16
VAPA-205ENST00000578314 PGPA6NDG6 321 aa16.03■□□□□ 0.16
VAPA-205ENST00000578314 RGS13O14921 159 aa16.03■□□□□ 0.16
VAPA-205ENST00000578314 RTL8CO15255 209 aa16.03■□□□□ 0.16
VAPA-205ENST00000578314 HOXA5P20719 270 aa16.03■□□□□ 0.16
VAPA-205ENST00000578314 IBA57Q5T440 356 aaKnown RBP16.03■□□□□ 0.16
VAPA-205ENST00000578314 HSD17B11Q8NBQ5 300 aa16.03■□□□□ 0.16
VAPA-205ENST00000578314 TMED6Q8WW62 240 aa16.03■□□□□ 0.16
VAPA-205ENST00000578314 TP53TG3Q9ULZ0 132 aa16.03■□□□□ 0.16
VAPA-205ENST00000578314 TRAV26-1A0A087WT03 109 aa16.02■□□□□ 0.16
VAPA-205ENST00000578314 TCL1AP56279 114 aa16.02■□□□□ 0.16
VAPA-205ENST00000578314 FAM74A1Q5RGS3 127 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms