RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 SLC17A3O00476 420 aa7.69□□□□□ -1.18
SS18-207ENST00000577636 GCGP01275 180 aa7.69□□□□□ -1.18
SS18-207ENST00000577636 RAB5AP20339 215 aa7.69□□□□□ -1.18
SS18-207ENST00000577636 CDX1P47902 265 aaPredicted RBP7.69□□□□□ -1.18
SS18-207ENST00000577636 FLI1Q01543 452 aaPredicted RBP7.69□□□□□ -1.18
SS18-207ENST00000577636 IBA57Q5T440 356 aaKnown RBP7.69□□□□□ -1.18
SS18-207ENST00000577636 UNQ9165/PRO28630Q6UXU0 137 aa7.69□□□□□ -1.18
SS18-207ENST00000577636 MYOZ3Q8TDC0 251 aa7.69□□□□□ -1.18
SS18-207ENST00000577636 DAZAP1Q96EP5 407 aaKnown RBP7.69□□□□□ -1.18
SS18-207ENST00000577636 C16orf92Q96LL3 132 aa7.69□□□□□ -1.18
SS18-207ENST00000577636 C17orf77Q96MU5 243 aa7.69□□□□□ -1.18
SS18-207ENST00000577636 NDFIP1Q9BT67 221 aa7.69□□□□□ -1.18
SS18-207ENST00000577636 ZNF331Q9NQX6 463 aaPredicted RBP7.69□□□□□ -1.18
SS18-207ENST00000577636 OSTCQ9NRP0 149 aa7.69□□□□□ -1.18
SS18-207ENST00000577636 ZFP30Q9Y2G7 519 aa7.69□□□□□ -1.18
SS18-207ENST00000577636 ZNF256Q9Y2P7 627 aaPredicted RBP7.69□□□□□ -1.18
SS18-207ENST00000577636 C1orf196B1AJZ1 125 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 DIRC3C9JPN6 131 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 LGALS9O00182 355 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 CT45A10P0DMU9 189 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 RAB5BP61020 215 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 ELOBQ15370 118 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 PSG3Q16557 428 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 SAPCD1Q5SSQ6 148 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 ADAMTSL5Q6ZMM2 481 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 PRNTQ86SH4 94 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 C4orf3Q8WVX3 66 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 FAM210BQ96KR6 192 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 LINC00479Q96M42 142 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 RHPN1-AS1Q9BWJ2 59 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 ZMAT4Q9H898 229 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 SMPXQ9UHP9 88 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 BIRC6Q9NR09 4857 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 RYR2Q92736 4967 aa7.68□□□□□ -1.18
SS18-207ENST00000577636 EPPK1P58107 5090 aaKnown RBP7.68□□□□□ -1.18
SS18-207ENST00000577636 ZNF705GA8MUZ8 300 aaPredicted RBP7.67□□□□□ -1.18
SS18-207ENST00000577636 LINC01619G3V211 115 aa7.67□□□□□ -1.18
SS18-207ENST00000577636 K7EN84 100 aa7.67□□□□□ -1.18
SS18-207ENST00000577636 GATCO43716 136 aaKnown RBP7.67□□□□□ -1.18
SS18-207ENST00000577636 LTAP01374 205 aa7.67□□□□□ -1.18
SS18-207ENST00000577636 APOHP02749 345 aaPredicted RBP7.67□□□□□ -1.18
SS18-207ENST00000577636 ID1P41134 155 aa7.67□□□□□ -1.18
SS18-207ENST00000577636 RPS10P46783 165 aaKnown RBP7.67□□□□□ -1.18
SS18-207ENST00000577636 TM4SF20Q53R12 229 aa7.67□□□□□ -1.18
SS18-207ENST00000577636 LCN12Q6JVE5 192 aa7.67□□□□□ -1.18
SS18-207ENST00000577636 PRR27Q6MZM9 219 aa7.67□□□□□ -1.18
SS18-207ENST00000577636 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.67□□□□□ -1.18
SS18-207ENST00000577636 FAM231DQ6ZW35 169 aa7.67□□□□□ -1.18
SS18-207ENST00000577636 Q86TA4 180 aa7.67□□□□□ -1.18
SS18-207ENST00000577636 NHLRC2Q8NBF2 726 aa7.67□□□□□ -1.18
SS18-207ENST00000577636 GLMPQ8WWB7 406 aa7.67□□□□□ -1.18
SS18-207ENST00000577636 MRPL53Q96EL3 112 aaKnown RBP7.67□□□□□ -1.18
SS18-207ENST00000577636 NRN1Q9NPD7 142 aa7.67□□□□□ -1.18
SS18-207ENST00000577636 PEMTQ9UBM1 199 aa7.67□□□□□ -1.18
SS18-207ENST00000577636 PSG8Q9UQ74 426 aa7.67□□□□□ -1.18
SS18-207ENST00000577636 TRBV24-1A0A075B6N3 115 aa7.66□□□□□ -1.18
SS18-207ENST00000577636 TRAV9-1A0A075B6T8 112 aa7.66□□□□□ -1.18
SS18-207ENST00000577636 IGHV4OR15-8A0A075B7B6 117 aa7.66□□□□□ -1.18
SS18-207ENST00000577636 A0A087WW49 117 aa7.66□□□□□ -1.18
SS18-207ENST00000577636 A0A1W2PPQ1 181 aa7.66□□□□□ -1.18
SS18-207ENST00000577636 RBAKDNA6NC62 111 aa7.66□□□□□ -1.18
SS18-207ENST00000577636 A8MWP6 167 aa7.66□□□□□ -1.18
SS18-207ENST00000577636 M0R3E3 92 aa7.66□□□□□ -1.18
SS18-207ENST00000577636 CHEK1O14757 476 aa7.66□□□□□ -1.18
SS18-207ENST00000577636 FOLR2P14207 255 aa7.66□□□□□ -1.18
SS18-207ENST00000577636 OR5I1Q13606 314 aa7.66□□□□□ -1.18
SS18-207ENST00000577636 TMEM183AQ8IXX5 376 aa7.66□□□□□ -1.18
SS18-207ENST00000577636 GBGT1Q8N5D6 347 aa7.66□□□□□ -1.18
SS18-207ENST00000577636 OR11H1Q8NG94 326 aa7.66□□□□□ -1.18
SS18-207ENST00000577636 OR1N2Q8NGR9 330 aa7.66□□□□□ -1.18
SS18-207ENST00000577636 SGK494Q96LW2 274 aa7.66□□□□□ -1.18
SS18-207ENST00000577636 IL36BQ9NZH7 164 aa7.66□□□□□ -1.18
SS18-207ENST00000577636 TGIF2-C20orf24A0A0A6YYL0 155 aa7.65□□□□□ -1.18
SS18-207ENST00000577636 IGLV2-8P01709 118 aa7.65□□□□□ -1.18
SS18-207ENST00000577636 P01737 135 aa7.65□□□□□ -1.18
SS18-207ENST00000577636 PFN1P07737 140 aaKnown RBP7.65□□□□□ -1.18
SS18-207ENST00000577636 FRMD6-AS1P0C7T7 363 aa7.65□□□□□ -1.18
SS18-207ENST00000577636 SYNJ2BPP57105 145 aa7.65□□□□□ -1.18
SS18-207ENST00000577636 PAFAH1B2P68402 229 aa7.65□□□□□ -1.18
SS18-207ENST00000577636 TMEM78Q5T7P6 136 aa7.65□□□□□ -1.18
SS18-207ENST00000577636 TCF24Q7RTU0 167 aa7.65□□□□□ -1.18
SS18-207ENST00000577636 DYNC2H1Q8NCM8 4307 aaKnown RBP7.65□□□□□ -1.18
SS18-207ENST00000577636 RNASE7Q9H1E1 156 aaKnown RBP7.65□□□□□ -1.18
SS18-207ENST00000577636 ZNF492Q9P255 531 aa7.65□□□□□ -1.18
SS18-207ENST00000577636 HUWE1Q7Z6Z7 4374 aaKnown RBP7.65□□□□□ -1.19
SS18-207ENST00000577636 SACSQ9NZJ4 4579 aa7.64□□□□□ -1.19
SS18-207ENST00000577636 TRAV8-1A0A0A6YYK1 113 aa7.64□□□□□ -1.19
SS18-207ENST00000577636 OVOL1O14753 267 aa7.64□□□□□ -1.19
SS18-207ENST00000577636 FAM3BP58499 235 aaPredicted RBP7.64□□□□□ -1.19
SS18-207ENST00000577636 ZNF738Q8NE65 137 aa7.64□□□□□ -1.19
SS18-207ENST00000577636 NUDT10Q8NFP7 164 aa7.64□□□□□ -1.19
SS18-207ENST00000577636 OR4B1Q8NGF8 309 aa7.64□□□□□ -1.19
SS18-207ENST00000577636 OR10J6PQ8NGY7 276 aa7.64□□□□□ -1.19
SS18-207ENST00000577636 NUDT11Q96G61 164 aa7.64□□□□□ -1.19
SS18-207ENST00000577636 YPEL4Q96NS1 127 aa7.64□□□□□ -1.19
SS18-207ENST00000577636 MLST8Q9BVC4 326 aa7.64□□□□□ -1.19
SS18-207ENST00000577636 DNAH7Q8WXX0 4024 aa7.64□□□□□ -1.19
SS18-207ENST00000577636 IGKV2-40A0A087WW87 121 aaPredicted RBP7.63□□□□□ -1.19
SS18-207ENST00000577636 XKRY2A2RUG3 117 aa7.63□□□□□ -1.19
SS18-207ENST00000577636 A8MWL6 223 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms