RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 GPX1P07203 203 aa10.9□□□□□ -0.66
SMG6-220ENST00000576218 DEFB130BP0DP73 79 aa10.9□□□□□ -0.66
SMG6-220ENST00000576218 DEFB130AP0DP74 79 aa10.9□□□□□ -0.66
SMG6-220ENST00000576218 ATP6V0CP27449 155 aa10.9□□□□□ -0.66
SMG6-220ENST00000576218 KIR3DS1Q14943 382 aa10.9□□□□□ -0.66
SMG6-220ENST00000576218 GNPNAT1Q96EK6 184 aaPredicted RBP10.9□□□□□ -0.66
SMG6-220ENST00000576218 PSMG3Q9BT73 122 aaPredicted RBP10.9□□□□□ -0.66
SMG6-220ENST00000576218 TNFSF18Q9UNG2 199 aa10.9□□□□□ -0.66
SMG6-220ENST00000576218 C7orf71A4D174 169 aa10.89□□□□□ -0.67
SMG6-220ENST00000576218 AZU1P20160 251 aa10.89□□□□□ -0.67
SMG6-220ENST00000576218 RNASE4P34096 147 aaKnown RBP10.89□□□□□ -0.67
SMG6-220ENST00000576218 LGALS9CQ6DKI2 356 aa10.89□□□□□ -0.67
SMG6-220ENST00000576218 ZNF493Q6ZR52 646 aa10.89□□□□□ -0.67
SMG6-220ENST00000576218 IQCF2Q8IXL9 164 aa10.89□□□□□ -0.67
SMG6-220ENST00000576218 OR2G3Q8NGZ4 309 aa10.89□□□□□ -0.67
SMG6-220ENST00000576218 RXFP4Q8TDU9 374 aa10.89□□□□□ -0.67
SMG6-220ENST00000576218 TMEM263Q8WUH6 116 aaKnown RBP10.89□□□□□ -0.67
SMG6-220ENST00000576218 ZNF503Q96F45 646 aa10.89□□□□□ -0.67
SMG6-220ENST00000576218 AGPAT4-IT1Q9H0P7 198 aa10.89□□□□□ -0.67
SMG6-220ENST00000576218 PLA2G2EQ9NZK7 142 aa10.89□□□□□ -0.67
SMG6-220ENST00000576218 TIMM8BQ9Y5J9 83 aaPredicted RBP10.89□□□□□ -0.67
SMG6-220ENST00000576218 RNF222A6NCQ9 220 aa10.88□□□□□ -0.67
SMG6-220ENST00000576218 SNURFLB1AK76 121 aa10.88□□□□□ -0.67
SMG6-220ENST00000576218 SERF2P84101 59 aa10.88□□□□□ -0.67
SMG6-220ENST00000576218 RPL7L1Q6DKI1 246 aaKnown RBP10.88□□□□□ -0.67
SMG6-220ENST00000576218 C9orf47Q6ZRZ4 202 aa10.88□□□□□ -0.67
SMG6-220ENST00000576218 VGLL1Q99990 258 aa10.88□□□□□ -0.67
SMG6-220ENST00000576218 SH3BGRL3Q9H299 93 aa10.88□□□□□ -0.67
SMG6-220ENST00000576218 OTORQ9NRC9 128 aa10.88□□□□□ -0.67
SMG6-220ENST00000576218 APLNQ9ULZ1 77 aa10.88□□□□□ -0.67
SMG6-220ENST00000576218 PGPA6NDG6 321 aa10.87□□□□□ -0.67
SMG6-220ENST00000576218 CBY3A6NI87 242 aa10.87□□□□□ -0.67
SMG6-220ENST00000576218 ARL14EPLP0DKL9 152 aa10.87□□□□□ -0.67
SMG6-220ENST00000576218 ZNF138P52744 262 aa10.87□□□□□ -0.67
SMG6-220ENST00000576218 BTN1A1Q13410 526 aa10.87□□□□□ -0.67
SMG6-220ENST00000576218 Q8TAT8 98 aa10.87□□□□□ -0.67
SMG6-220ENST00000576218 PYGO2Q9BRQ0 406 aa10.87□□□□□ -0.67
SMG6-220ENST00000576218 ACTR3CQ9C0K3 210 aaPredicted RBP10.87□□□□□ -0.67
SMG6-220ENST00000576218 NOP10Q9NPE3 64 aaKnown RBP10.87□□□□□ -0.67
SMG6-220ENST00000576218 SMLR1H3BR10 107 aa10.86□□□□□ -0.67
SMG6-220ENST00000576218 TAAR5O14804 337 aa10.86□□□□□ -0.67
SMG6-220ENST00000576218 RGS13O14921 159 aa10.86□□□□□ -0.67
SMG6-220ENST00000576218 AKR1C8PQ5T2L2 129 aa10.86□□□□□ -0.67
SMG6-220ENST00000576218 RAB24Q969Q5 203 aa10.86□□□□□ -0.67
SMG6-220ENST00000576218 RYR3Q15413 4870 aa10.86□□□□□ -0.67
SMG6-220ENST00000576218 DYNC2H1Q8NCM8 4307 aaKnown RBP10.85□□□□□ -0.67
SMG6-220ENST00000576218 RBAKDNA6NC62 111 aa10.85□□□□□ -0.67
SMG6-220ENST00000576218 F5H768 121 aa10.85□□□□□ -0.67
SMG6-220ENST00000576218 CD300CQ08708 224 aa10.85□□□□□ -0.67
SMG6-220ENST00000576218 UBE2DNLQ8IWF7 75 aa10.85□□□□□ -0.67
SMG6-220ENST00000576218 RNASE8Q8TDE3 154 aaKnown RBP10.85□□□□□ -0.67
SMG6-220ENST00000576218 FAM210BQ96KR6 192 aa10.85□□□□□ -0.67
SMG6-220ENST00000576218 LYSTQ99698 3801 aa10.85□□□□□ -0.67
SMG6-220ENST00000576218 ARPC5LQ9BPX5 153 aa10.85□□□□□ -0.67
SMG6-220ENST00000576218 ZNF492Q9P255 531 aa10.85□□□□□ -0.67
SMG6-220ENST00000576218 KLLNB2CW77 178 aa10.84□□□□□ -0.67
SMG6-220ENST00000576218 DIRC3C9JPN6 131 aa10.84□□□□□ -0.67
SMG6-220ENST00000576218 CXorf1O96002 111 aa10.84□□□□□ -0.67
SMG6-220ENST00000576218 ATP5G1P05496 136 aa10.84□□□□□ -0.67
SMG6-220ENST00000576218 NMBP08949 121 aa10.84□□□□□ -0.67
SMG6-220ENST00000576218 STAG3L2P0CL84 134 aa10.84□□□□□ -0.67
SMG6-220ENST00000576218 STAG3L3P0CL85 134 aa10.84□□□□□ -0.67
SMG6-220ENST00000576218 CRISP2P16562 243 aa10.84□□□□□ -0.67
SMG6-220ENST00000576218 ATP5G3P48201 142 aa10.84□□□□□ -0.67
SMG6-220ENST00000576218 GOLT1AQ6ZVE7 132 aa10.84□□□□□ -0.67
SMG6-220ENST00000576218 ZNF680Q8NEM1 530 aa10.84□□□□□ -0.67
SMG6-220ENST00000576218 TMEM167BQ9NRX6 74 aa10.84□□□□□ -0.67
SMG6-220ENST00000576218 PLAC8L1A1L4L8 177 aa10.83□□□□□ -0.68
SMG6-220ENST00000576218 K7EQM0 130 aa10.83□□□□□ -0.68
SMG6-220ENST00000576218 P0DMU3 169 aa10.83□□□□□ -0.68
SMG6-220ENST00000576218 FAM231AP0DMU4 169 aa10.83□□□□□ -0.68
SMG6-220ENST00000576218 FAM231CP0DMU5 169 aa10.83□□□□□ -0.68
SMG6-220ENST00000576218 GCHFRP30047 84 aa10.83□□□□□ -0.68
SMG6-220ENST00000576218 EIF4E3Q8N5X7 224 aaKnown RBP10.83□□□□□ -0.68
SMG6-220ENST00000576218 FAM19A4Q96LR4 140 aa10.83□□□□□ -0.68
SMG6-220ENST00000576218 GAGE12BA1L429 117 aa10.82□□□□□ -0.68
SMG6-220ENST00000576218 GAGE7O76087 117 aa10.82□□□□□ -0.68
SMG6-220ENST00000576218 GAGE12FP0CL80 117 aa10.82□□□□□ -0.68
SMG6-220ENST00000576218 GAGE12GP0CL81 117 aa10.82□□□□□ -0.68
SMG6-220ENST00000576218 GAGE12IP0CL82 117 aa10.82□□□□□ -0.68
SMG6-220ENST00000576218 TMEM88Q6PEY1 159 aa10.82□□□□□ -0.68
SMG6-220ENST00000576218 ZFAND2AQ8N6M9 145 aa10.82□□□□□ -0.68
SMG6-220ENST00000576218 NDFIP1Q9BT67 221 aa10.82□□□□□ -0.68
SMG6-220ENST00000576218 ALMS1Q8TCU4 4167 aa10.81□□□□□ -0.68
SMG6-220ENST00000576218 TRBV7-9A0A0J9YWB2 115 aa10.81□□□□□ -0.68
SMG6-220ENST00000576218 KANTRA0A1W2PQU2 76 aa10.81□□□□□ -0.68
SMG6-220ENST00000576218 G3V3Q6 166 aa10.81□□□□□ -0.68
SMG6-220ENST00000576218 GNG5P63218 68 aa10.81□□□□□ -0.68
SMG6-220ENST00000576218 ST6GAL2Q96JF0 529 aa10.81□□□□□ -0.68
SMG6-220ENST00000576218 TRGV2A0A075B6R0 118 aa10.8□□□□□ -0.68
SMG6-220ENST00000576218 IGHV1OR15-1A0A075B7D0 117 aa10.8□□□□□ -0.68
SMG6-220ENST00000576218 CTXND1A0A1B0GTU2 59 aa10.8□□□□□ -0.68
SMG6-220ENST00000576218 PFDN1O60925 122 aa10.8□□□□□ -0.68
SMG6-220ENST00000576218 ZNF345Q14585 488 aa10.8□□□□□ -0.68
SMG6-220ENST00000576218 PRR9Q5T870 116 aa10.8□□□□□ -0.68
SMG6-220ENST00000576218 C15orf53Q8NAA6 179 aa10.8□□□□□ -0.68
SMG6-220ENST00000576218 C5orf17Q8NAS9 161 aa10.8□□□□□ -0.68
SMG6-220ENST00000576218 GSN-AS1Q9NRJ2 163 aa10.8□□□□□ -0.68
SMG6-220ENST00000576218 NAGKQ9UJ70 344 aa10.8□□□□□ -0.68
SMG6-220ENST00000576218 LENEPQ9Y5L5 61 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms