RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 RETNQ9HD89 108 aa10.62□□□□□ -0.71
NPLOC4-209ENST00000572760 GNG13Q9P2W3 67 aa10.62□□□□□ -0.71
NPLOC4-209ENST00000572760 EPDR1Q9UM22 224 aa10.62□□□□□ -0.71
NPLOC4-209ENST00000572760 ARL2-SNX15V9GYD0 113 aa10.62□□□□□ -0.71
NPLOC4-209ENST00000572760 SERTM2A0A1B0GWG4 89 aa10.61□□□□□ -0.71
NPLOC4-209ENST00000572760 F6UZH7 168 aa10.61□□□□□ -0.71
NPLOC4-209ENST00000572760 M0R2Z0 102 aa10.61□□□□□ -0.71
NPLOC4-209ENST00000572760 TCRAP04437 139 aa10.61□□□□□ -0.71
NPLOC4-209ENST00000572760 CT45A10P0DMU9 189 aa10.61□□□□□ -0.71
NPLOC4-209ENST00000572760 CDKN1BP46527 198 aa10.61□□□□□ -0.71
NPLOC4-209ENST00000572760 CCL20P78556 96 aa10.61□□□□□ -0.71
NPLOC4-209ENST00000572760 RNF183Q96D59 192 aa10.61□□□□□ -0.71
NPLOC4-209ENST00000572760 MANBALQ9NQG1 85 aa10.61□□□□□ -0.71
NPLOC4-209ENST00000572760 J3KRW8 73 aa10.6□□□□□ -0.71
NPLOC4-209ENST00000572760 INSP01308 110 aa10.6□□□□□ -0.71
NPLOC4-209ENST00000572760 GIG44P09565 113 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-209ENST00000572760 ATP5G3P48201 142 aa10.6□□□□□ -0.71
NPLOC4-209ENST00000572760 ZNF138P52744 262 aa10.6□□□□□ -0.71
NPLOC4-209ENST00000572760 ZNF680Q8NEM1 530 aa10.6□□□□□ -0.71
NPLOC4-209ENST00000572760 ODF3Q96PU9 254 aa10.6□□□□□ -0.71
NPLOC4-209ENST00000572760 OVOL2Q9BRP0 275 aa10.6□□□□□ -0.71
NPLOC4-209ENST00000572760 ATG101Q9BSB4 218 aa10.6□□□□□ -0.71
NPLOC4-209ENST00000572760 TMEM208Q9BTX3 173 aa10.6□□□□□ -0.71
NPLOC4-209ENST00000572760 TP53TG1Q9Y2A0 90 aa10.6□□□□□ -0.71
NPLOC4-209ENST00000572760 GOLT1BQ9Y3E0 138 aa10.6□□□□□ -0.71
NPLOC4-209ENST00000572760 TRAV12-2A0A075B6T6 113 aa10.59□□□□□ -0.71
NPLOC4-209ENST00000572760 IGHV3OR16-12A0A075B7B8 117 aa10.59□□□□□ -0.71
NPLOC4-209ENST00000572760 PEX7O00628 323 aa10.59□□□□□ -0.71
NPLOC4-209ENST00000572760 CYB561D1Q8N8Q1 229 aa10.59□□□□□ -0.71
NPLOC4-209ENST00000572760 OR11H2Q8NH07 326 aa10.59□□□□□ -0.71
NPLOC4-209ENST00000572760 HIST1H2BAQ96A08 127 aa10.59□□□□□ -0.71
NPLOC4-209ENST00000572760 IGF2BP2-AS1Q96M15 143 aa10.59□□□□□ -0.71
NPLOC4-209ENST00000572760 RARRES2Q99969 163 aa10.59□□□□□ -0.71
NPLOC4-209ENST00000572760 ZNF492Q9P255 531 aa10.59□□□□□ -0.71
NPLOC4-209ENST00000572760 U3KQK5 164 aa10.59□□□□□ -0.71
NPLOC4-209ENST00000572760 C11orf94C9JXX5 98 aa10.58□□□□□ -0.72
NPLOC4-209ENST00000572760 GPX1P07203 203 aa10.58□□□□□ -0.72
NPLOC4-209ENST00000572760 Q8TAT8 98 aa10.58□□□□□ -0.72
NPLOC4-209ENST00000572760 SGK494Q96LW2 274 aa10.58□□□□□ -0.72
NPLOC4-209ENST00000572760 TCEAL7Q9BRU2 100 aa10.58□□□□□ -0.72
NPLOC4-209ENST00000572760 NDFIP1Q9BT67 221 aa10.58□□□□□ -0.72
NPLOC4-209ENST00000572760 TRAV8-1A0A0A6YYK1 113 aa10.57□□□□□ -0.72
NPLOC4-209ENST00000572760 FBLL1A6NHQ2 334 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-209ENST00000572760 AKR1C3P42330 323 aa10.57□□□□□ -0.72
NPLOC4-209ENST00000572760 PRNTQ86SH4 94 aa10.57□□□□□ -0.72
NPLOC4-209ENST00000572760 CSNK1G2-AS1Q8NCQ2 148 aa10.57□□□□□ -0.72
NPLOC4-209ENST00000572760 TXNDC17Q9BRA2 123 aa10.57□□□□□ -0.72
NPLOC4-209ENST00000572760 PSG8Q9UQ74 426 aa10.57□□□□□ -0.72
NPLOC4-209ENST00000572760 CRXO43186 299 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-209ENST00000572760 BCL2P10415 239 aa10.56□□□□□ -0.72
NPLOC4-209ENST00000572760 TAGLN2P37802 199 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-209ENST00000572760 UBE2G1P62253 170 aa10.56□□□□□ -0.72
NPLOC4-209ENST00000572760 FLI1Q01543 452 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-209ENST00000572760 CCDC28AQ8IWP9 274 aa10.56□□□□□ -0.72
NPLOC4-209ENST00000572760 TMEM75Q8N9X5 138 aa10.56□□□□□ -0.72
NPLOC4-209ENST00000572760 PCNPQ8WW12 178 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-209ENST00000572760 LINC01587Q99440 93 aa10.56□□□□□ -0.72
NPLOC4-209ENST00000572760 VAX2Q9UIW0 290 aa10.56□□□□□ -0.72
NPLOC4-209ENST00000572760 LENEPQ9Y5L5 61 aa10.56□□□□□ -0.72
NPLOC4-209ENST00000572760 PRKDCP78527 4128 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-209ENST00000572760 TRAV12-3A0A0B4J271 114 aa10.55□□□□□ -0.72
NPLOC4-209ENST00000572760 TRAV34A0A0B4J273 112 aa10.55□□□□□ -0.72
NPLOC4-209ENST00000572760 TRBV7-9A0A0J9YWB2 115 aa10.55□□□□□ -0.72
NPLOC4-209ENST00000572760 NMBP08949 121 aa10.55□□□□□ -0.72
NPLOC4-209ENST00000572760 CRISP2P16562 243 aa10.55□□□□□ -0.72
NPLOC4-209ENST00000572760 RNASE4P34096 147 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-209ENST00000572760 RAB14P61106 215 aa10.55□□□□□ -0.72
NPLOC4-209ENST00000572760 PMS2P11Q13670 270 aa10.55□□□□□ -0.72
NPLOC4-209ENST00000572760 KIR3DS1Q14943 382 aa10.55□□□□□ -0.72
NPLOC4-209ENST00000572760 GFI1BQ5VTD9 330 aa10.55□□□□□ -0.72
NPLOC4-209ENST00000572760 C20orf144Q9BQM9 153 aa10.55□□□□□ -0.72
NPLOC4-209ENST00000572760 NIPSNAP3BQ9BS92 247 aa10.55□□□□□ -0.72
NPLOC4-209ENST00000572760 TREM1Q9NP99 234 aa10.55□□□□□ -0.72
NPLOC4-209ENST00000572760 NBEAL2Q6ZNJ1 2754 aa10.55□□□□□ -0.72
NPLOC4-209ENST00000572760 C7orf71A4D174 169 aa10.54□□□□□ -0.72
NPLOC4-209ENST00000572760 MEF2BQ02080 365 aaPredicted RBP10.54□□□□□ -0.72
NPLOC4-209ENST00000572760 BTN1A1Q13410 526 aa10.54□□□□□ -0.72
NPLOC4-209ENST00000572760 C1orf158Q8N1D5 194 aa10.54□□□□□ -0.72
NPLOC4-209ENST00000572760 TMEM256Q8N2U0 113 aa10.54□□□□□ -0.72
NPLOC4-209ENST00000572760 LYPD6BQ8NI32 183 aa10.54□□□□□ -0.72
NPLOC4-209ENST00000572760 FAM19A4Q96LR4 140 aa10.54□□□□□ -0.72
NPLOC4-209ENST00000572760 LINC00479Q96M42 142 aa10.54□□□□□ -0.72
NPLOC4-209ENST00000572760 LOC102723971A0A1B0GUV8 181 aa10.53□□□□□ -0.72
NPLOC4-209ENST00000572760 SCO2A0A1W2PP80 73 aa10.53□□□□□ -0.72
NPLOC4-209ENST00000572760 RBFOX3A6NFN3 312 aa10.53□□□□□ -0.72
NPLOC4-209ENST00000572760 SMIM9A6NGZ8 99 aa10.53□□□□□ -0.72
NPLOC4-209ENST00000572760 KLLNB2CW77 178 aa10.53□□□□□ -0.72
NPLOC4-209ENST00000572760 S100A9P06702 114 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-209ENST00000572760 MIFP14174 115 aa10.53□□□□□ -0.72
NPLOC4-209ENST00000572760 HTN1P15515 57 aa10.53□□□□□ -0.72
NPLOC4-209ENST00000572760 SAPCD1Q5SSQ6 148 aa10.53□□□□□ -0.72
NPLOC4-209ENST00000572760 ZNF705AQ6ZN79 300 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-209ENST00000572760 ZFAND2AQ8N6M9 145 aa10.53□□□□□ -0.72
NPLOC4-209ENST00000572760 FMC1Q96HJ9 113 aa10.53□□□□□ -0.72
NPLOC4-209ENST00000572760 EIF5A2Q9GZV4 153 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-209ENST00000572760 H7BYZ3 331 aa10.52□□□□□ -0.73
NPLOC4-209ENST00000572760 PDE6DO43924 150 aa10.52□□□□□ -0.73
NPLOC4-209ENST00000572760 IGLV2-11P01706 119 aa10.52□□□□□ -0.73
NPLOC4-209ENST00000572760 RRN3P1Q2M238 152 aa10.52□□□□□ -0.73
NPLOC4-209ENST00000572760 ZNF767PQ75MW2 155 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms