RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 PARD6GQ9BYG4 376 aaPredicted RBP11.11□□□□□ -0.63
HCFC1R1-203ENST00000572355 WFDC1Q9HC57 220 aa11.11□□□□□ -0.63
HCFC1R1-203ENST00000572355 SLC39A9Q9NUM3 307 aa11.11□□□□□ -0.63
HCFC1R1-203ENST00000572355 MRPS16Q9Y3D3 137 aaKnown RBP11.11□□□□□ -0.63
HCFC1R1-203ENST00000572355 HSPB11Q9Y547 144 aa11.11□□□□□ -0.63
HCFC1R1-203ENST00000572355 A0A1W2PPQ1 181 aa11.1□□□□□ -0.63
HCFC1R1-203ENST00000572355 Q6ZRG5 221 aa11.1□□□□□ -0.63
HCFC1R1-203ENST00000572355 ZNF503Q96F45 646 aa11.1□□□□□ -0.63
HCFC1R1-203ENST00000572355 DNAJC4Q9NNZ3 241 aa11.1□□□□□ -0.63
HCFC1R1-203ENST00000572355 MRPS12O15235 138 aaKnown RBP11.09□□□□□ -0.63
HCFC1R1-203ENST00000572355 EIF3GO75821 320 aaKnown RBP eCLIP11.09□□□□□ -0.63
HCFC1R1-203ENST00000572355 FUSP35637 526 aaKnown RBP eCLIP11.09□□□□□ -0.63
HCFC1R1-203ENST00000572355 RPL29P47914 159 aaKnown RBP11.09□□□□□ -0.63
HCFC1R1-203ENST00000572355 LINC00315P59091 139 aa11.09□□□□□ -0.63
HCFC1R1-203ENST00000572355 CCDC28AQ8IWP9 274 aa11.09□□□□□ -0.63
HCFC1R1-203ENST00000572355 LINC00612Q8N6U2 182 aa11.09□□□□□ -0.63
HCFC1R1-203ENST00000572355 NPCDR1Q9BY65 106 aa11.09□□□□□ -0.63
HCFC1R1-203ENST00000572355 SNURFLB1AK76 121 aa11.08□□□□□ -0.64
HCFC1R1-203ENST00000572355 PXDC1Q5TGL8 231 aa11.08□□□□□ -0.64
HCFC1R1-203ENST00000572355 GFI1BQ5VTD9 330 aa11.08□□□□□ -0.64
HCFC1R1-203ENST00000572355 WDR61Q9GZS3 305 aaKnown RBP11.08□□□□□ -0.64
HCFC1R1-203ENST00000572355 TMPRSS5Q9H3S3 457 aa11.08□□□□□ -0.64
HCFC1R1-203ENST00000572355 H3BQ15 152 aa11.07□□□□□ -0.64
HCFC1R1-203ENST00000572355 J3KRW8 73 aa11.07□□□□□ -0.64
HCFC1R1-203ENST00000572355 PET100P0DJ07 73 aa11.07□□□□□ -0.64
HCFC1R1-203ENST00000572355 OR1L4Q8NGR5 311 aa11.07□□□□□ -0.64
HCFC1R1-203ENST00000572355 ATP5SQ99766 215 aa11.07□□□□□ -0.64
HCFC1R1-203ENST00000572355 C20orf144Q9BQM9 153 aa11.07□□□□□ -0.64
HCFC1R1-203ENST00000572355 HERC1Q15751 4861 aa11.07□□□□□ -0.64
HCFC1R1-203ENST00000572355 SLC17A3O00476 420 aa11.06□□□□□ -0.64
HCFC1R1-203ENST00000572355 INAFM2P0DMQ5 153 aa11.06□□□□□ -0.64
HCFC1R1-203ENST00000572355 LCN15Q6UWW0 184 aa11.06□□□□□ -0.64
HCFC1R1-203ENST00000572355 MIR17HGQ75NE6 70 aa11.06□□□□□ -0.64
HCFC1R1-203ENST00000572355 S100A7AQ86SG5 101 aa11.06□□□□□ -0.64
HCFC1R1-203ENST00000572355 ZNF331Q9NQX6 463 aaPredicted RBP11.06□□□□□ -0.64
HCFC1R1-203ENST00000572355 H3BNG1 76 aa11.05□□□□□ -0.64
HCFC1R1-203ENST00000572355 SMLR1H3BR10 107 aa11.05□□□□□ -0.64
HCFC1R1-203ENST00000572355 PYYP10082 97 aa11.05□□□□□ -0.64
HCFC1R1-203ENST00000572355 CXCL2P19875 107 aa11.05□□□□□ -0.64
HCFC1R1-203ENST00000572355 Q6ZRN7 208 aaPredicted RBP11.05□□□□□ -0.64
HCFC1R1-203ENST00000572355 BPIFA4PQ86YQ2 179 aa11.05□□□□□ -0.64
HCFC1R1-203ENST00000572355 SCGB1C1Q8TD33 95 aa11.05□□□□□ -0.64
HCFC1R1-203ENST00000572355 SLC50A1Q9BRV3 221 aa11.05□□□□□ -0.64
HCFC1R1-203ENST00000572355 A0A096LPF7 62 aa11.04□□□□□ -0.64
HCFC1R1-203ENST00000572355 PRAC2D3DTV9 90 aa11.04□□□□□ -0.64
HCFC1R1-203ENST00000572355 MPDU1O75352 247 aa11.04□□□□□ -0.64
HCFC1R1-203ENST00000572355 IFNA5P01569 189 aa11.04□□□□□ -0.64
HCFC1R1-203ENST00000572355 GIPP09681 153 aaPredicted RBP11.04□□□□□ -0.64
HCFC1R1-203ENST00000572355 Q6ZTI0 123 aa11.04□□□□□ -0.64
HCFC1R1-203ENST00000572355 CHAC2Q8WUX2 184 aa11.04□□□□□ -0.64
HCFC1R1-203ENST00000572355 PFDN5Q99471 154 aa11.04□□□□□ -0.64
HCFC1R1-203ENST00000572355 FXYD6-FXYD2A0A087WZ82 144 aa11.03□□□□□ -0.64
HCFC1R1-203ENST00000572355 TRAV12-3A0A0B4J271 114 aa11.03□□□□□ -0.64
HCFC1R1-203ENST00000572355 IGLC2P0DOY2 106 aa11.03□□□□□ -0.64
HCFC1R1-203ENST00000572355 ERVFC1-1P60608 527 aa11.03□□□□□ -0.64
HCFC1R1-203ENST00000572355 FFAR4Q5NUL3 377 aa11.03□□□□□ -0.64
HCFC1R1-203ENST00000572355 Q5VSD8 79 aa11.03□□□□□ -0.64
HCFC1R1-203ENST00000572355 LYPD1Q8N2G4 141 aa11.03□□□□□ -0.64
HCFC1R1-203ENST00000572355 BLNKQ8WV28 456 aa11.03□□□□□ -0.64
HCFC1R1-203ENST00000572355 RNF24Q9Y225 148 aa11.03□□□□□ -0.64
HCFC1R1-203ENST00000572355 TRGV2A0A075B6R0 118 aa11.02□□□□□ -0.65
HCFC1R1-203ENST00000572355 EREGO14944 169 aa11.02□□□□□ -0.65
HCFC1R1-203ENST00000572355 OR2T35Q8NGX2 323 aa11.02□□□□□ -0.65
HCFC1R1-203ENST00000572355 VSIG2Q96IQ7 327 aa11.02□□□□□ -0.65
HCFC1R1-203ENST00000572355 SLC25A2Q9BXI2 301 aa11.02□□□□□ -0.65
HCFC1R1-203ENST00000572355 C17orf112F2Z3M2 114 aa11.01□□□□□ -0.65
HCFC1R1-203ENST00000572355 SIVA1O15304 175 aa11.01□□□□□ -0.65
HCFC1R1-203ENST00000572355 XGP55808 180 aa11.01□□□□□ -0.65
HCFC1R1-203ENST00000572355 FRZBQ92765 325 aa11.01□□□□□ -0.65
HCFC1R1-203ENST00000572355 SAT2Q96F10 170 aaPredicted RBP11.01□□□□□ -0.65
HCFC1R1-203ENST00000572355 FAM167A-AS1Q96KT0 104 aa11.01□□□□□ -0.65
HCFC1R1-203ENST00000572355 PGPEP1Q9NXJ5 209 aa11.01□□□□□ -0.65
HCFC1R1-203ENST00000572355 G3V3Q6 166 aa11□□□□□ -0.65
HCFC1R1-203ENST00000572355 NXPH4O95158 308 aa11□□□□□ -0.65
HCFC1R1-203ENST00000572355 CT45A10P0DMU9 189 aa11□□□□□ -0.65
HCFC1R1-203ENST00000572355 LEPP41159 167 aa11□□□□□ -0.65
HCFC1R1-203ENST00000572355 DAZ2Q13117 558 aaKnown RBP11□□□□□ -0.65
HCFC1R1-203ENST00000572355 HSD17B11Q8NBQ5 300 aa11□□□□□ -0.65
HCFC1R1-203ENST00000572355 PYGO2Q9BRQ0 406 aa11□□□□□ -0.65
HCFC1R1-203ENST00000572355 TNFRSF18Q9Y5U5 241 aa11□□□□□ -0.65
HCFC1R1-203ENST00000572355 TRGV1A0A0A0MS02 117 aa10.99□□□□□ -0.65
HCFC1R1-203ENST00000572355 M0R3E3 92 aa10.99□□□□□ -0.65
HCFC1R1-203ENST00000572355 NDUFB4O95168 129 aa10.99□□□□□ -0.65
HCFC1R1-203ENST00000572355 OR10J4P0C629 311 aa10.99□□□□□ -0.65
HCFC1R1-203ENST00000572355 DNAH10OSP0CZ25 163 aa10.99□□□□□ -0.65
HCFC1R1-203ENST00000572355 RAB2AP61019 212 aa10.99□□□□□ -0.65
HCFC1R1-203ENST00000572355 CDPF1Q6NVV7 123 aa10.99□□□□□ -0.65
HCFC1R1-203ENST00000572355 EXOC3-AS1Q8N2X6 119 aa10.99□□□□□ -0.65
HCFC1R1-203ENST00000572355 AQP10Q96PS8 301 aa10.99□□□□□ -0.65
HCFC1R1-203ENST00000572355 GSN-AS1Q9NRJ2 163 aa10.99□□□□□ -0.65
HCFC1R1-203ENST00000572355 FUT9Q9Y231 359 aa10.99□□□□□ -0.65
HCFC1R1-203ENST00000572355 RNF222A6NCQ9 220 aa10.98□□□□□ -0.65
HCFC1R1-203ENST00000572355 NPIPB6E9PJ23 425 aa10.98□□□□□ -0.65
HCFC1R1-203ENST00000572355 HMGB3O15347 200 aaKnown RBP10.98□□□□□ -0.65
HCFC1R1-203ENST00000572355 HIST1H1EP10412 219 aaKnown RBP10.98□□□□□ -0.65
HCFC1R1-203ENST00000572355 FAM122CQ6P4D5 195 aa10.98□□□□□ -0.65
HCFC1R1-203ENST00000572355 ODF3Q96PU9 254 aa10.98□□□□□ -0.65
HCFC1R1-203ENST00000572355 OR51M1Q9H341 326 aa10.98□□□□□ -0.65
HCFC1R1-203ENST00000572355 KCNIP2Q9NS61 270 aa10.98□□□□□ -0.65
HCFC1R1-203ENST00000572355 TMEM14CQ9P0S9 112 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms