RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 PRAC2D3DTV9 90 aa13.9□□□□□ -0.18
SMPD3-211ENST00000568373 KLF5Q13887 457 aaPredicted RBP13.9□□□□□ -0.18
SMPD3-211ENST00000568373 Q6AWC8 147 aa13.9□□□□□ -0.18
SMPD3-211ENST00000568373 GLMPQ8WWB7 406 aa13.9□□□□□ -0.18
SMPD3-211ENST00000568373 IQCJQ1A5X6 159 aa13.89□□□□□ -0.19
SMPD3-211ENST00000568373 LCNL1Q6ZST4 164 aa13.89□□□□□ -0.19
SMPD3-211ENST00000568373 Q6ZWC4 215 aa13.89□□□□□ -0.19
SMPD3-211ENST00000568373 MRPL53Q96EL3 112 aaKnown RBP13.89□□□□□ -0.19
SMPD3-211ENST00000568373 NDFIP1Q9BT67 221 aa13.89□□□□□ -0.19
SMPD3-211ENST00000568373 A0A1W2PS18 150 aa13.89□□□□□ -0.19
SMPD3-211ENST00000568373 GPX1P07203 203 aa13.89□□□□□ -0.19
SMPD3-211ENST00000568373 TMEM95Q3KNT9 176 aa13.89□□□□□ -0.19
SMPD3-211ENST00000568373 PRRC2AP48634 2157 aaKnown RBP13.88□□□□□ -0.19
SMPD3-211ENST00000568373 TMEM189A5PLL7 270 aa13.88□□□□□ -0.19
SMPD3-211ENST00000568373 ARMS2P0C7Q2 107 aa13.88□□□□□ -0.19
SMPD3-211ENST00000568373 FAM209BQ5JX69 171 aa13.88□□□□□ -0.19
SMPD3-211ENST00000568373 C9orf139Q6ZV77 190 aa13.88□□□□□ -0.19
SMPD3-211ENST00000568373 SIGLECL1Q8N7X8 197 aa13.88□□□□□ -0.19
SMPD3-211ENST00000568373 BMI1P35226 326 aa13.87□□□□□ -0.19
SMPD3-211ENST00000568373 ERCC8Q13216 396 aa13.87□□□□□ -0.19
SMPD3-211ENST00000568373 RIGQ13278 110 aa13.87□□□□□ -0.19
SMPD3-211ENST00000568373 PRR31Q5SQ13 230 aa13.87□□□□□ -0.19
SMPD3-211ENST00000568373 SMAD7O15105 426 aaKnown RBP13.87□□□□□ -0.19
SMPD3-211ENST00000568373 SCGB1D1O95968 90 aa13.87□□□□□ -0.19
SMPD3-211ENST00000568373 ZNF80P51504 273 aaPredicted RBP13.87□□□□□ -0.19
SMPD3-211ENST00000568373 NPFFR1Q9GZQ6 430 aa13.87□□□□□ -0.19
SMPD3-211ENST00000568373 ZNF324O75467 553 aaPredicted RBP13.86□□□□□ -0.19
SMPD3-211ENST00000568373 PSMB8P28062 276 aa13.86□□□□□ -0.19
SMPD3-211ENST00000568373 AMTP48728 403 aa13.86□□□□□ -0.19
SMPD3-211ENST00000568373 PKIAP61925 76 aa13.86□□□□□ -0.19
SMPD3-211ENST00000568373 Q96MF0 132 aa13.86□□□□□ -0.19
SMPD3-211ENST00000568373 CLEC5AQ9NY25 188 aa13.86□□□□□ -0.19
SMPD3-211ENST00000568373 VPREB3Q9UKI3 123 aa13.86□□□□□ -0.19
SMPD3-211ENST00000568373 ITPR2Q14571 2701 aa13.86□□□□□ -0.19
SMPD3-211ENST00000568373 A0A1B0GW15 77 aa13.86□□□□□ -0.19
SMPD3-211ENST00000568373 TPPP3Q9BW30 176 aa13.86□□□□□ -0.19
SMPD3-211ENST00000568373 NAGKQ9UJ70 344 aa13.86□□□□□ -0.19
SMPD3-211ENST00000568373 TMSB15BA0A087X1C1 80 aa13.85□□□□□ -0.19
SMPD3-211ENST00000568373 LOC102724200A0A096LPH7 203 aaPredicted RBP13.85□□□□□ -0.19
SMPD3-211ENST00000568373 PMCHP20382 165 aa13.85□□□□□ -0.19
SMPD3-211ENST00000568373 Q6YL49 198 aa13.85□□□□□ -0.19
SMPD3-211ENST00000568373 GATD1Q8NB37 220 aa13.85□□□□□ -0.19
SMPD3-211ENST00000568373 BORCS7Q96B45 105 aa13.85□□□□□ -0.19
SMPD3-211ENST00000568373 C16orf92Q96LL3 132 aa13.85□□□□□ -0.19
SMPD3-211ENST00000568373 MXRA5Q9NR99 2828 aa13.85□□□□□ -0.19
SMPD3-211ENST00000568373 CD33P20138 364 aa13.84□□□□□ -0.19
SMPD3-211ENST00000568373 PRSS57Q6UWY2 283 aa13.84□□□□□ -0.19
SMPD3-211ENST00000568373 KRTAP1-3Q8IUG1 177 aa13.84□□□□□ -0.19
SMPD3-211ENST00000568373 TSTD3H0UI37 97 aa13.84□□□□□ -0.19
SMPD3-211ENST00000568373 RPS20P60866 119 aaKnown RBP13.84□□□□□ -0.19
SMPD3-211ENST00000568373 SRSF2Q01130 221 aaKnown RBP13.84□□□□□ -0.19
SMPD3-211ENST00000568373 AGPAT4-IT1Q9H0P7 198 aa13.84□□□□□ -0.19
SMPD3-211ENST00000568373 TEX15Q9BXT5 2789 aa13.83□□□□□ -0.19
SMPD3-211ENST00000568373 LYZL1Q6UWQ5 148 aa13.83□□□□□ -0.2
SMPD3-211ENST00000568373 IL17RELQ6ZVW7 336 aa13.83□□□□□ -0.2
SMPD3-211ENST00000568373 NRN1Q9NPD7 142 aa13.83□□□□□ -0.2
SMPD3-211ENST00000568373 PEF1Q9UBV8 284 aaKnown RBP13.83□□□□□ -0.2
SMPD3-211ENST00000568373 UNC79Q9P2D8 2635 aa13.83□□□□□ -0.2
SMPD3-211ENST00000568373 TMEM89A2RUT3 159 aa13.83□□□□□ -0.2
SMPD3-211ENST00000568373 FABP5P3A8MUU1 101 aa13.83□□□□□ -0.2
SMPD3-211ENST00000568373 TMEM78Q5T7P6 136 aa13.83□□□□□ -0.2
SMPD3-211ENST00000568373 GPHB5Q86YW7 130 aa13.83□□□□□ -0.2
SMPD3-211ENST00000568373 ZNF664Q8N3J9 261 aa13.83□□□□□ -0.2
SMPD3-211ENST00000568373 PRO1933Q9H354 126 aa13.83□□□□□ -0.2
SMPD3-211ENST00000568373 ZNF138P52744 262 aa13.82□□□□□ -0.2
SMPD3-211ENST00000568373 C9orf47Q6ZRZ4 202 aa13.82□□□□□ -0.2
SMPD3-211ENST00000568373 FAM19A2Q8N3H0 131 aa13.82□□□□□ -0.2
SMPD3-211ENST00000568373 DAZ1Q9NQZ3 744 aaKnown RBP13.82□□□□□ -0.2
SMPD3-211ENST00000568373 CYB5R2Q6BCY4 276 aa13.81□□□□□ -0.2
SMPD3-211ENST00000568373 IGHV7-4-1A0A0J9YVY3 117 aa13.81□□□□□ -0.2
SMPD3-211ENST00000568373 HSBP1O75506 76 aa13.81□□□□□ -0.2
SMPD3-211ENST00000568373 CTRLP40313 264 aa13.81□□□□□ -0.2
SMPD3-211ENST00000568373 RNASEKQ6P5S7 137 aaKnown RBP13.81□□□□□ -0.2
SMPD3-211ENST00000568373 C10orf99Q6UWK7 81 aa13.81□□□□□ -0.2
SMPD3-211ENST00000568373 ZNF575Q86XF7 245 aa13.81□□□□□ -0.2
SMPD3-211ENST00000568373 RNF114Q9Y508 228 aa13.81□□□□□ -0.2
SMPD3-211ENST00000568373 SOCS3O14543 225 aa13.8□□□□□ -0.2
SMPD3-211ENST00000568373 ORM1P02763 201 aa13.8□□□□□ -0.2
SMPD3-211ENST00000568373 NTF3P20783 257 aa13.8□□□□□ -0.2
SMPD3-211ENST00000568373 TM4SF20Q53R12 229 aa13.8□□□□□ -0.2
SMPD3-211ENST00000568373 ZNF493Q6ZR52 646 aa13.8□□□□□ -0.2
SMPD3-211ENST00000568373 NIT1Q86X76 327 aa13.8□□□□□ -0.2
SMPD3-211ENST00000568373 C20orf173Q96LM9 149 aa13.8□□□□□ -0.2
SMPD3-211ENST00000568373 PPP1R14DQ9NXH3 145 aa13.8□□□□□ -0.2
SMPD3-211ENST00000568373 HOXA3O43365 443 aaPredicted RBP13.79□□□□□ -0.2
SMPD3-211ENST00000568373 IGLC6P0CF74 106 aa13.79□□□□□ -0.2
SMPD3-211ENST00000568373 FER1L6-AS1Q8NA97 138 aa13.79□□□□□ -0.2
SMPD3-211ENST00000568373 ZNF738Q8NE65 137 aa13.79□□□□□ -0.2
SMPD3-211ENST00000568373 URB1-AS1Q96HZ7 61 aa13.79□□□□□ -0.2
SMPD3-211ENST00000568373 RHPN1-AS1Q9BWJ2 59 aa13.79□□□□□ -0.2
SMPD3-211ENST00000568373 ZNF705DP0CH99 300 aaPredicted RBP13.79□□□□□ -0.2
SMPD3-211ENST00000568373 ZNF705BP0CI00 300 aaPredicted RBP13.79□□□□□ -0.2
SMPD3-211ENST00000568373 LINC01559Q495D7 138 aa13.79□□□□□ -0.2
SMPD3-211ENST00000568373 FAM106AQ4KMX7 169 aa13.79□□□□□ -0.2
SMPD3-211ENST00000568373 K7EMT4 169 aa13.78□□□□□ -0.2
SMPD3-211ENST00000568373 KRTDAPP60985 99 aa13.78□□□□□ -0.2
SMPD3-211ENST00000568373 ZNF702PQ9H963 129 aa13.78□□□□□ -0.2
SMPD3-211ENST00000568373 TMEM213A2RRL7 107 aa13.78□□□□□ -0.2
SMPD3-211ENST00000568373 DDTP30046 118 aa13.78□□□□□ -0.2
SMPD3-211ENST00000568373 RPL11P62913 178 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms