RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 CNEP1R1Q8N9A8 125 aa4.29□□□□□ -1.72
LINC01541-202ENST00000568095 ZNF418Q8TF45 676 aaPredicted RBP4.29□□□□□ -1.72
LINC01541-202ENST00000568095 SVILO95425 2214 aa4.29□□□□□ -1.72
LINC01541-202ENST00000568095 D6R8Y8 96 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 IGLV2-23P01705 113 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 IGHV3-13P01766 116 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 CDSNQ15517 529 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 GFRALQ6UXV0 394 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 GEMIN7Q9H840 131 aaKnown RBP4.28□□□□□ -1.72
LINC01541-202ENST00000568095 DKK2Q9UBU2 259 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 POLEQ07864 2286 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 IGLV3-9A0A075B6K5 115 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 TRBV25-1A0A075B6N4 114 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 hADV38S2A0JD32 116 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 K7ERJ3 54 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 HERV-K104P63124 156 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 KLRD1Q13241 179 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 ZNF575Q86XF7 245 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 ORMDL3Q8N138 153 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 ZNRF1Q8ND25 227 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 RPUSD1Q9UJJ7 312 aaKnown RBP4.28□□□□□ -1.72
LINC01541-202ENST00000568095 ATRXP46100 2492 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 NPIPB5A8MRT5 1133 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 PRRG2O14669 202 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 TNFRSF13BO14836 293 aaPredicted RBP4.28□□□□□ -1.72
LINC01541-202ENST00000568095 TIMM8AO60220 97 aaPredicted RBP4.28□□□□□ -1.72
LINC01541-202ENST00000568095 NMUP48645 174 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 SUB1P53999 127 aaKnown RBP eCLIP4.28□□□□□ -1.72
LINC01541-202ENST00000568095 TIRAPP58753 221 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 MRPL51Q4U2R6 128 aaKnown RBP4.28□□□□□ -1.72
LINC01541-202ENST00000568095 WFDC3Q8IUB2 231 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 NUP37Q8NFH4 326 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 OR10X1Q8NGY0 326 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 SRSF12Q8WXF0 261 aaKnown RBP4.28□□□□□ -1.72
LINC01541-202ENST00000568095 PRELID3AQ96N28 172 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 ONECUT1Q9UBC0 465 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 LRBAP50851 2863 aa4.28□□□□□ -1.72
LINC01541-202ENST00000568095 TRAV8-1A0A0A6YYK1 113 aa4.27□□□□□ -1.73
LINC01541-202ENST00000568095 K7EQM0 130 aa4.27□□□□□ -1.73
LINC01541-202ENST00000568095 GCSHP23434 173 aa4.27□□□□□ -1.73
LINC01541-202ENST00000568095 C12orf74Q32Q52 190 aa4.27□□□□□ -1.73
LINC01541-202ENST00000568095 SH2D6Q7Z4S9 175 aa4.27□□□□□ -1.73
LINC01541-202ENST00000568095 LYPD1Q8N2G4 141 aa4.27□□□□□ -1.73
LINC01541-202ENST00000568095 ARPC1AQ92747 370 aa4.27□□□□□ -1.73
LINC01541-202ENST00000568095 SLC25A39Q9BZJ4 359 aaPredicted RBP4.27□□□□□ -1.73
LINC01541-202ENST00000568095 ERG28Q9UKR5 140 aa4.27□□□□□ -1.73
LINC01541-202ENST00000568095 TRBV7-3A0A075B6L6 115 aa4.27□□□□□ -1.73
LINC01541-202ENST00000568095 PLAUP00749 431 aa4.27□□□□□ -1.73
LINC01541-202ENST00000568095 INSL3P51460 131 aa4.27□□□□□ -1.73
LINC01541-202ENST00000568095 FAM27E3Q08E93 113 aa4.27□□□□□ -1.73
LINC01541-202ENST00000568095 FOXI1Q12951 378 aa4.27□□□□□ -1.73
LINC01541-202ENST00000568095 RRN3P1Q2M238 152 aa4.27□□□□□ -1.73
LINC01541-202ENST00000568095 GAGE13Q4V321 117 aa4.27□□□□□ -1.73
LINC01541-202ENST00000568095 TMEM158Q8WZ71 300 aa4.27□□□□□ -1.73
LINC01541-202ENST00000568095 F11RQ9Y624 299 aaKnown RBP4.27□□□□□ -1.73
LINC01541-202ENST00000568095 MAP1BP46821 2468 aaKnown RBP4.26□□□□□ -1.73
LINC01541-202ENST00000568095 IGHV3OR15-7A0A075B7D8 119 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 A0A1W2PRX2 142 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 H3BMG7 143 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 H3BS24 57 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 SMCPP49901 116 aaPredicted RBP4.26□□□□□ -1.73
LINC01541-202ENST00000568095 ATP5G2Q06055 141 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 ETDBQ3ZM63 59 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 SPRNQ5BIV9 151 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 PRNTQ86SH4 94 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 C8orf31Q8N9H6 132 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 C1QTNF4Q9BXJ3 329 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 CNFNQ9BYD5 112 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 TMEM133Q9H2Q1 129 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 CSMD2Q7Z408 3487 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 TRBV19A0A075B6N1 114 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 MRPS12O15235 138 aaKnown RBP4.26□□□□□ -1.73
LINC01541-202ENST00000568095 ORM2P19652 201 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 FCER1GP30273 86 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 FHL3Q13643 280 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 LY6DQ14210 128 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 KLF17Q5JT82 389 aaPredicted RBP4.26□□□□□ -1.73
LINC01541-202ENST00000568095 CFAP126Q5VTH2 177 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 GOLT1AQ6ZVE7 132 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 AMN1Q8IY45 258 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 RNF185Q96GF1 192 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 HARBI1Q96MB7 349 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 GAFA1Q96PS6 74 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 ASCL2Q99929 193 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 MRPL20Q9BYC9 149 aaKnown RBP4.26□□□□□ -1.73
LINC01541-202ENST00000568095 HEATR1Q9H583 2144 aaKnown RBP4.26□□□□□ -1.73
LINC01541-202ENST00000568095 YAE1D1Q9NRH1 226 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 NHP2Q9NX24 153 aaKnown RBP4.26□□□□□ -1.73
LINC01541-202ENST00000568095 CYSLTR1Q9Y271 337 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 ZNF469Q96JG9 3925 aaPredicted RBP4.26□□□□□ -1.73
LINC01541-202ENST00000568095 LOC389332A0A1B0GUA5 103 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 A0A1W2PPI3 338 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 NPYP01303 97 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 IGKCP01834 107 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 MORN3Q6PF18 240 aaPredicted RBP4.26□□□□□ -1.73
LINC01541-202ENST00000568095 LYZL1Q6UWQ5 148 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 SIGLEC15Q6ZMC9 328 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 SBSPONQ8IVN8 264 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 MAPKAPK5-AS1Q8N8E1 139 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 C20orf78Q9BR46 151 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms