RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 CUBNO60494 3623 aa16.08■□□□□ 0.16
MAP1LC3B-206ENST00000564844 WFDC2Q14508 124 aa16.08■□□□□ 0.16
MAP1LC3B-206ENST00000564844 SAMD13Q5VXD3 122 aa16.08■□□□□ 0.16
MAP1LC3B-206ENST00000564844 FAM169BQ8N8A8 192 aa16.08■□□□□ 0.16
MAP1LC3B-206ENST00000564844 AAMDCQ9H7C9 122 aa16.08■□□□□ 0.16
MAP1LC3B-206ENST00000564844 HES1Q14469 280 aa16.08■□□□□ 0.16
MAP1LC3B-206ENST00000564844 AZU1P20160 251 aa16.07■□□□□ 0.16
MAP1LC3B-206ENST00000564844 IGHV3-66A0A0C4DH42 116 aa16.07■□□□□ 0.16
MAP1LC3B-206ENST00000564844 K7EIM0 57 aa16.07■□□□□ 0.16
MAP1LC3B-206ENST00000564844 OR9G4Q8NGQ1 327 aa16.07■□□□□ 0.16
MAP1LC3B-206ENST00000564844 ZFHX3Q15911 3703 aa16.06■□□□□ 0.16
MAP1LC3B-206ENST00000564844 ERCC8Q13216 396 aa16.06■□□□□ 0.16
MAP1LC3B-206ENST00000564844 DEFB104AQ8WTQ1 72 aa16.06■□□□□ 0.16
MAP1LC3B-206ENST00000564844 SPRY2O43597 315 aa16.06■□□□□ 0.16
MAP1LC3B-206ENST00000564844 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.05■□□□□ 0.16
MAP1LC3B-206ENST00000564844 TMEM155Q4W5P6 130 aa16.05■□□□□ 0.16
MAP1LC3B-206ENST00000564844 ZC2HC1BQ5TFG8 222 aa16.05■□□□□ 0.16
MAP1LC3B-206ENST00000564844 OR4X2Q8NGF9 303 aa16.05■□□□□ 0.16
MAP1LC3B-206ENST00000564844 CHAC1Q9BUX1 264 aa16.05■□□□□ 0.16
MAP1LC3B-206ENST00000564844 H3BMG7 143 aa16.05■□□□□ 0.16
MAP1LC3B-206ENST00000564844 COL25A1Q9BXS0 654 aaPredicted RBP16.05■□□□□ 0.16
MAP1LC3B-206ENST00000564844 TMEM14CQ9P0S9 112 aa16.05■□□□□ 0.16
MAP1LC3B-206ENST00000564844 TSSC4Q9Y5U2 329 aaPredicted RBP16.05■□□□□ 0.16
MAP1LC3B-206ENST00000564844 NCOR2Q9Y618 2525 aa16.05■□□□□ 0.16
MAP1LC3B-206ENST00000564844 TRAV26-2A0A0B4J265 109 aa16.05■□□□□ 0.16
MAP1LC3B-206ENST00000564844 WI2-2373I1.2A0A1W2PRP0 233 aa16.05■□□□□ 0.16
MAP1LC3B-206ENST00000564844 TMEM30BQ3MIR4 351 aa16.05■□□□□ 0.16
MAP1LC3B-206ENST00000564844 TRAV40A0A0B4J280 105 aa16.04■□□□□ 0.16
MAP1LC3B-206ENST00000564844 H3BRN7 92 aa16.04■□□□□ 0.16
MAP1LC3B-206ENST00000564844 HOXB4P17483 251 aaPredicted RBP16.04■□□□□ 0.16
MAP1LC3B-206ENST00000564844 ETDBQ3ZM63 59 aa16.04■□□□□ 0.16
MAP1LC3B-206ENST00000564844 KLK15Q9H2R5 256 aa16.04■□□□□ 0.16
MAP1LC3B-206ENST00000564844 RBPJQ06330 500 aa16.04■□□□□ 0.16
MAP1LC3B-206ENST00000564844 DLX6P56179 175 aa16.03■□□□□ 0.16
MAP1LC3B-206ENST00000564844 PLA2G2CQ5R387 149 aa16.03■□□□□ 0.16
MAP1LC3B-206ENST00000564844 ARPC1AQ92747 370 aa16.03■□□□□ 0.16
MAP1LC3B-206ENST00000564844 CHD8Q9HCK8 2581 aa16.03■□□□□ 0.16
MAP1LC3B-206ENST00000564844 IGHV3-49A0A0A0MS15 119 aa16.03■□□□□ 0.16
MAP1LC3B-206ENST00000564844 TIMM23O14925 209 aa16.03■□□□□ 0.16
MAP1LC3B-206ENST00000564844 TMEM158Q8WZ71 300 aa16.03■□□□□ 0.16
MAP1LC3B-206ENST00000564844 ONECUT1Q9UBC0 465 aa16.03■□□□□ 0.16
MAP1LC3B-206ENST00000564844 CREBBPQ92793 2442 aa16.02■□□□□ 0.16
MAP1LC3B-206ENST00000564844 TRBV25-1A0A075B6N4 114 aa16.02■□□□□ 0.16
MAP1LC3B-206ENST00000564844 BUB1B-PAK6H3BSN5 160 aa16.02■□□□□ 0.16
MAP1LC3B-206ENST00000564844 ZNF562Q6V9R5 426 aa16.02■□□□□ 0.16
MAP1LC3B-206ENST00000564844 TMEM8BA6NDV4 472 aa16.02■□□□□ 0.15
MAP1LC3B-206ENST00000564844 GFRALQ6UXV0 394 aa16.02■□□□□ 0.15
MAP1LC3B-206ENST00000564844 ZNF493Q6ZR52 646 aa16.02■□□□□ 0.15
MAP1LC3B-206ENST00000564844 J3KRW8 73 aa16.01■□□□□ 0.15
MAP1LC3B-206ENST00000564844 CRYGBP07316 175 aa16.01■□□□□ 0.15
MAP1LC3B-206ENST00000564844 LINC00311Q8N616 119 aa16.01■□□□□ 0.15
MAP1LC3B-206ENST00000564844 MAPKAPK5-AS1Q8N8E1 139 aa16.01■□□□□ 0.15
MAP1LC3B-206ENST00000564844 NDUFA3O95167 84 aa16.01■□□□□ 0.15
MAP1LC3B-206ENST00000564844 Q6ZQT7 251 aa16.01■□□□□ 0.15
MAP1LC3B-206ENST00000564844 RNF182Q8N6D2 247 aa16.01■□□□□ 0.15
MAP1LC3B-206ENST00000564844 OR5A1Q8NGJ0 315 aa16.01■□□□□ 0.15
MAP1LC3B-206ENST00000564844 PRR25Q96S07 402 aa16.01■□□□□ 0.15
MAP1LC3B-206ENST00000564844 C16orf97H3BN30 126 aa16■□□□□ 0.15
MAP1LC3B-206ENST00000564844 INSL3P51460 131 aa16■□□□□ 0.15
MAP1LC3B-206ENST00000564844 ODF1Q14990 250 aa16■□□□□ 0.15
MAP1LC3B-206ENST00000564844 MAP1LC3AQ9H492 121 aa16■□□□□ 0.15
MAP1LC3B-206ENST00000564844 HHLA3Q9XRX5 114 aa16■□□□□ 0.15
MAP1LC3B-206ENST00000564844 RNASE6Q93091 150 aaKnown RBP16■□□□□ 0.15
MAP1LC3B-206ENST00000564844 UFC1Q9Y3C8 167 aa16■□□□□ 0.15
MAP1LC3B-206ENST00000564844 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16■□□□□ 0.154e-8■■□□□ 12.9
MAP1LC3B-206ENST00000564844 PTPRQQ9UMZ3 2332 aa15.99■□□□□ 0.15
MAP1LC3B-206ENST00000564844 TNFRSF6BO95407 300 aa15.99■□□□□ 0.15
MAP1LC3B-206ENST00000564844 A0A1B0GW15 77 aa15.99■□□□□ 0.15
MAP1LC3B-206ENST00000564844 PRAC2D3DTV9 90 aa15.99■□□□□ 0.15
MAP1LC3B-206ENST00000564844 EFNA4P52798 201 aa15.99■□□□□ 0.15
MAP1LC3B-206ENST00000564844 KLRD1Q13241 179 aa15.99■□□□□ 0.15
MAP1LC3B-206ENST00000564844 MRPL35Q9NZE8 188 aaKnown RBP15.99■□□□□ 0.15
MAP1LC3B-206ENST00000564844 NCBP2LA6PVI3 153 aaKnown RBP15.98■□□□□ 0.15
MAP1LC3B-206ENST00000564844 IGKCP01834 107 aa15.98■□□□□ 0.15
MAP1LC3B-206ENST00000564844 ATP5G2Q06055 141 aa15.98■□□□□ 0.15
MAP1LC3B-206ENST00000564844 PAX8Q06710 450 aa15.98■□□□□ 0.15
MAP1LC3B-206ENST00000564844 PRR30Q53SZ7 412 aaPredicted RBP15.98■□□□□ 0.15
MAP1LC3B-206ENST00000564844 Q6AWC8 147 aa15.98■□□□□ 0.15
MAP1LC3B-206ENST00000564844 IGFL2Q6UWQ7 119 aa15.98■□□□□ 0.15
MAP1LC3B-206ENST00000564844 U3KQK5 164 aa15.98■□□□□ 0.15
MAP1LC3B-206ENST00000564844 A0A0G2JNJ9 132 aa15.98■□□□□ 0.15
MAP1LC3B-206ENST00000564844 MRPS12O15235 138 aaKnown RBP15.98■□□□□ 0.15
MAP1LC3B-206ENST00000564844 THBDP07204 575 aa15.98■□□□□ 0.15
MAP1LC3B-206ENST00000564844 Q9UFV3 132 aa15.98■□□□□ 0.15
MAP1LC3B-206ENST00000564844 IGLV1-47P01700 117 aa15.97■□□□□ 0.15
MAP1LC3B-206ENST00000564844 TRGV3P03979 118 aa15.97■□□□□ 0.15
MAP1LC3B-206ENST00000564844 RNF185Q96GF1 192 aa15.97■□□□□ 0.15
MAP1LC3B-206ENST00000564844 C1orf122Q6ZSJ8 110 aa15.96■□□□□ 0.15
MAP1LC3B-206ENST00000564844 DPF1Q92782 380 aa15.96■□□□□ 0.15
MAP1LC3B-206ENST00000564844 SIGMAR1Q99720 223 aa15.96■□□□□ 0.14
MAP1LC3B-206ENST00000564844 PVRIGQ6DKI7 326 aa15.95■□□□□ 0.14
MAP1LC3B-206ENST00000564844 HIST1H4GQ99525 98 aa15.95■□□□□ 0.14
MAP1LC3B-206ENST00000564844 SIVA1O15304 175 aa15.95■□□□□ 0.14
MAP1LC3B-206ENST00000564844 ZNF479Q96JC4 524 aa15.95■□□□□ 0.14
MAP1LC3B-206ENST00000564844 DYNAPQ8N1N2 210 aa15.94■□□□□ 0.14
MAP1LC3B-206ENST00000564844 GAGE12HA6NDE8 117 aa15.94■□□□□ 0.14
MAP1LC3B-206ENST00000564844 SMIM17P0DL12 118 aa15.94■□□□□ 0.14
MAP1LC3B-206ENST00000564844 NUP37Q8NFH4 326 aa15.94■□□□□ 0.14
MAP1LC3B-206ENST00000564844 LINC01560Q8TB33 94 aa15.94■□□□□ 0.14
MAP1LC3B-206ENST00000564844 IL17RELQ6ZVW7 336 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms