RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 OTORQ9NRC9 128 aa9.68□□□□□ -0.86
SPG7-209ENST00000564047 URGCP-MRPS24S4R325 110 aa9.68□□□□□ -0.86
SPG7-209ENST00000564047 IZUMO1RA6ND01 250 aa9.67□□□□□ -0.86
SPG7-209ENST00000564047 PGPA6NDG6 321 aa9.67□□□□□ -0.86
SPG7-209ENST00000564047 OR4C46A6NHA9 309 aa9.67□□□□□ -0.86
SPG7-209ENST00000564047 GGTLC3B5MD39 225 aa9.67□□□□□ -0.86
SPG7-209ENST00000564047 IGLL1P15814 213 aa9.67□□□□□ -0.86
SPG7-209ENST00000564047 ID1P41134 155 aa9.67□□□□□ -0.86
SPG7-209ENST00000564047 TFPI2P48307 235 aa9.67□□□□□ -0.86
SPG7-209ENST00000564047 AKR1D1P51857 326 aa9.67□□□□□ -0.86
SPG7-209ENST00000564047 SUMO1P63165 101 aaKnown RBP9.67□□□□□ -0.86
SPG7-209ENST00000564047 WFDC3Q8IUB2 231 aa9.67□□□□□ -0.86
SPG7-209ENST00000564047 EXOC3-AS1Q8N2X6 119 aa9.67□□□□□ -0.86
SPG7-209ENST00000564047 MRPL53Q96EL3 112 aaKnown RBP9.67□□□□□ -0.86
SPG7-209ENST00000564047 SRD5A3Q9H8P0 318 aa9.67□□□□□ -0.86
SPG7-209ENST00000564047 TYMSP04818 313 aa9.66□□□□□ -0.86
SPG7-209ENST00000564047 RPL35P42766 123 aaKnown RBP9.66□□□□□ -0.86
SPG7-209ENST00000564047 KCNIP4Q6PIL6 250 aa9.66□□□□□ -0.86
SPG7-209ENST00000564047 ARL6IP6Q8N6S5 226 aa9.66□□□□□ -0.86
SPG7-209ENST00000564047 ZNF256Q9Y2P7 627 aaPredicted RBP9.66□□□□□ -0.86
SPG7-209ENST00000564047 SCO2A0A1W2PP80 73 aa9.65□□□□□ -0.86
SPG7-209ENST00000564047 SMIM6P0DI80 62 aa9.65□□□□□ -0.86
SPG7-209ENST00000564047 HOXA5P20719 270 aa9.65□□□□□ -0.86
SPG7-209ENST00000564047 SNRPD3P62318 126 aaKnown RBP9.65□□□□□ -0.86
SPG7-209ENST00000564047 FABP9Q0Z7S8 132 aa9.65□□□□□ -0.86
SPG7-209ENST00000564047 PSG3Q16557 428 aa9.65□□□□□ -0.86
SPG7-209ENST00000564047 IGFL4Q6B9Z1 124 aa9.65□□□□□ -0.86
SPG7-209ENST00000564047 C5orf17Q8NAS9 161 aa9.65□□□□□ -0.86
SPG7-209ENST00000564047 CMTM2Q8TAZ6 248 aa9.65□□□□□ -0.86
SPG7-209ENST00000564047 TRAV9-1A0A075B6T8 112 aa9.64□□□□□ -0.87
SPG7-209ENST00000564047 M0R3E3 92 aa9.64□□□□□ -0.87
SPG7-209ENST00000564047 PHOX2AO14813 284 aa9.64□□□□□ -0.87
SPG7-209ENST00000564047 SLC25A5P05141 298 aaKnown RBP9.64□□□□□ -0.87
SPG7-209ENST00000564047 HLA-DMBP28068 263 aa9.64□□□□□ -0.87
SPG7-209ENST00000564047 CSN1S1P47710 185 aa9.64□□□□□ -0.87
SPG7-209ENST00000564047 FAM3BP58499 235 aaPredicted RBP9.64□□□□□ -0.87
SPG7-209ENST00000564047 BEAN1Q3B7T3 259 aa9.64□□□□□ -0.87
SPG7-209ENST00000564047 RNF182Q8N6D2 247 aa9.64□□□□□ -0.87
SPG7-209ENST00000564047 EPDR1Q9UM22 224 aa9.64□□□□□ -0.87
SPG7-209ENST00000564047 HIST1H2BKO60814 126 aa9.63□□□□□ -0.87
SPG7-209ENST00000564047 TRGC2P03986 189 aa9.63□□□□□ -0.87
SPG7-209ENST00000564047 HIST1H2BJP06899 126 aa9.63□□□□□ -0.87
SPG7-209ENST00000564047 ZNF688P0C7X2 276 aa9.63□□□□□ -0.87
SPG7-209ENST00000564047 HIST1H2BOP23527 126 aa9.63□□□□□ -0.87
SPG7-209ENST00000564047 HIST1H2BBP33778 126 aa9.63□□□□□ -0.87
SPG7-209ENST00000564047 CMC4P56277 68 aaPredicted RBP9.63□□□□□ -0.87
SPG7-209ENST00000564047 HIST1H2BDP58876 126 aa9.63□□□□□ -0.87
SPG7-209ENST00000564047 HIST1H2BCP62807 126 aa9.63□□□□□ -0.87
SPG7-209ENST00000564047 HIST2H2BEQ16778 126 aa9.63□□□□□ -0.87
SPG7-209ENST00000564047 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.63□□□□□ -0.87
SPG7-209ENST00000564047 HIST1H2BHQ93079 126 aa9.63□□□□□ -0.87
SPG7-209ENST00000564047 SFRP2Q96HF1 295 aa9.63□□□□□ -0.87
SPG7-209ENST00000564047 C20orf173Q96LM9 149 aa9.63□□□□□ -0.87
SPG7-209ENST00000564047 HIST1H2BNQ99877 126 aa9.63□□□□□ -0.87
SPG7-209ENST00000564047 HIST1H2BMQ99879 126 aa9.63□□□□□ -0.87
SPG7-209ENST00000564047 DERL1Q9BUN8 251 aa9.63□□□□□ -0.87
SPG7-209ENST00000564047 TRBV20OR9-2A0A075B6H5 130 aa9.62□□□□□ -0.87
SPG7-209ENST00000564047 SERTM2A0A1B0GWG4 89 aa9.62□□□□□ -0.87
SPG7-209ENST00000564047 DIRC3C9JPN6 131 aa9.62□□□□□ -0.87
SPG7-209ENST00000564047 TCRAP04437 139 aa9.62□□□□□ -0.87
SPG7-209ENST00000564047 S100A9P06702 114 aaKnown RBP9.62□□□□□ -0.87
SPG7-209ENST00000564047 PSMG4Q5JS54 123 aa9.62□□□□□ -0.87
SPG7-209ENST00000564047 ZNF738Q8NE65 137 aa9.62□□□□□ -0.87
SPG7-209ENST00000564047 OR10G8Q8NGN5 311 aa9.62□□□□□ -0.87
SPG7-209ENST00000564047 FAM110AQ9BQ89 295 aa9.62□□□□□ -0.87
SPG7-209ENST00000564047 ATG101Q9BSB4 218 aa9.62□□□□□ -0.87
SPG7-209ENST00000564047 MAP6D1Q9H9H5 199 aa9.62□□□□□ -0.87
SPG7-209ENST00000564047 ZNF705FA8MVS1 300 aaPredicted RBP9.61□□□□□ -0.87
SPG7-209ENST00000564047 PEX7O00628 323 aa9.61□□□□□ -0.87
SPG7-209ENST00000564047 TRGC1P0CF51 173 aa9.61□□□□□ -0.87
SPG7-209ENST00000564047 TAS2R60P59551 318 aa9.61□□□□□ -0.87
SPG7-209ENST00000564047 DEFB131AP59861 70 aa9.61□□□□□ -0.87
SPG7-209ENST00000564047 GNG5P63218 68 aa9.61□□□□□ -0.87
SPG7-209ENST00000564047 OXLD1Q5BKU9 147 aa9.61□□□□□ -0.87
SPG7-209ENST00000564047 FRZBQ92765 325 aa9.61□□□□□ -0.87
SPG7-209ENST00000564047 C12orf57Q99622 126 aa9.61□□□□□ -0.87
SPG7-209ENST00000564047 ZMAT5Q9UDW3 170 aaKnown RBP9.61□□□□□ -0.87
SPG7-209ENST00000564047 RBAKDNA6NC62 111 aa9.6□□□□□ -0.87
SPG7-209ENST00000564047 PRAC2D3DTV9 90 aa9.6□□□□□ -0.87
SPG7-209ENST00000564047 K7EQM0 130 aa9.6□□□□□ -0.87
SPG7-209ENST00000564047 NDUFA6P56556 154 aa9.6□□□□□ -0.87
SPG7-209ENST00000564047 ODF3L2Q3SX64 289 aa9.6□□□□□ -0.87
SPG7-209ENST00000564047 GOLT1AQ6ZVE7 132 aa9.6□□□□□ -0.87
SPG7-209ENST00000564047 OCC1Q8TAD7 63 aa9.6□□□□□ -0.87
SPG7-209ENST00000564047 RPH3ALQ9UNE2 315 aa9.6□□□□□ -0.87
SPG7-209ENST00000564047 A0A1W2PPQ1 181 aa9.59□□□□□ -0.87
SPG7-209ENST00000564047 FBLL1A6NHQ2 334 aaKnown RBP9.59□□□□□ -0.87
SPG7-209ENST00000564047 OR11H12B2RN74 326 aa9.59□□□□□ -0.87
SPG7-209ENST00000564047 CD7P09564 240 aa9.59□□□□□ -0.87
SPG7-209ENST00000564047 GNG4P50150 75 aa9.59□□□□□ -0.87
SPG7-209ENST00000564047 S100A12P80511 92 aa9.59□□□□□ -0.87
SPG7-209ENST00000564047 EGFEM1PQ0D2K5 195 aa9.59□□□□□ -0.87
SPG7-209ENST00000564047 COA6Q5JTJ3 125 aaKnown RBP9.59□□□□□ -0.87
SPG7-209ENST00000564047 ACTL10Q5JWF8 245 aa9.59□□□□□ -0.87
SPG7-209ENST00000564047 SAMD5Q5TGI4 173 aa9.59□□□□□ -0.87
SPG7-209ENST00000564047 FOXI2Q6ZQN5 318 aa9.59□□□□□ -0.87
SPG7-209ENST00000564047 OSTCQ9NRP0 149 aa9.59□□□□□ -0.87
SPG7-209ENST00000564047 IL36BQ9NZH7 164 aa9.59□□□□□ -0.87
SPG7-209ENST00000564047 IGKV2-40A0A087WW87 121 aaPredicted RBP9.58□□□□□ -0.88
SPG7-209ENST00000564047 IGKV2D-40P01614 121 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms