RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 PLEKHB2Q96CS7 222 aa0.01□□□□□ -2.41
CHD9-207ENST00000562806 CARD19Q96LW7 228 aa0.01□□□□□ -2.41
CHD9-207ENST00000562806 AP1S3Q96PC3 154 aa0.01□□□□□ -2.41
CHD9-207ENST00000562806 SPRR2GQ9BYE4 73 aa0.01□□□□□ -2.41
CHD9-207ENST00000562806 STOML2Q9UJZ1 356 aa0.01□□□□□ -2.41
CHD9-207ENST00000562806 BCORL1Q5H9F3 1711 aa0.01□□□□□ -2.41
CHD9-207ENST00000562806 LOC285556D6RIA3 1793 aa0.01□□□□□ -2.41
CHD9-207ENST00000562806 CHD3Q12873 2000 aaKnown RBP0.01□□□□□ -2.41
CHD9-207ENST00000562806 LY6G6CO95867 125 aa0□□□□□ -2.41
CHD9-207ENST00000562806 TRACP01848 142 aa0□□□□□ -2.41
CHD9-207ENST00000562806 GYPBP06028 91 aa0□□□□□ -2.41
CHD9-207ENST00000562806 EVI2AP22794 236 aa0□□□□□ -2.41
CHD9-207ENST00000562806 RPS3P23396 243 aaKnown RBP eCLIP0□□□□□ -2.41
CHD9-207ENST00000562806 GNG3P63215 75 aa0□□□□□ -2.41
CHD9-207ENST00000562806 MRPS15P82914 257 aaKnown RBP0□□□□□ -2.41
CHD9-207ENST00000562806 GLYATL3Q5SZD4 288 aa0□□□□□ -2.41
CHD9-207ENST00000562806 ANKRD31Q8N7Z5 1873 aa0□□□□□ -2.41
CHD9-207ENST00000562806 OR5AK2Q8NH90 309 aa0□□□□□ -2.41
CHD9-207ENST00000562806 DIRC1Q969H9 104 aa0□□□□□ -2.41
CHD9-207ENST00000562806 IL20Q9NYY1 176 aa0□□□□□ -2.41
CHD9-207ENST00000562806 KIAA1549LQ6ZVL6 1849 aa-0.01□□□□□ -2.41
CHD9-207ENST00000562806 LRP1Q07954 4544 aaKnown RBP-0.01□□□□□ -2.41
CHD9-207ENST00000562806 TECPR2O15040 1411 aa-0.01□□□□□ -2.41
CHD9-207ENST00000562806 EIF3AQ14152 1382 aaKnown RBP-0.01□□□□□ -2.41
CHD9-207ENST00000562806 BDP1A6H8Y1 2624 aa-0.01□□□□□ -2.41
CHD9-207ENST00000562806 C3orf85A0A1B0GTC6 90 aa-0.01□□□□□ -2.41
CHD9-207ENST00000562806 C5orf58C9J3I9 102 aa-0.01□□□□□ -2.41
CHD9-207ENST00000562806 NDUFA6P56556 154 aa-0.01□□□□□ -2.41
CHD9-207ENST00000562806 TCTAP57738 103 aa-0.01□□□□□ -2.41
CHD9-207ENST00000562806 RPL37P61927 97 aaKnown RBP-0.01□□□□□ -2.41
CHD9-207ENST00000562806 SNRPD3P62318 126 aaKnown RBP-0.01□□□□□ -2.41
CHD9-207ENST00000562806 LTC4SQ16873 150 aa-0.01□□□□□ -2.41
CHD9-207ENST00000562806 IZUMO2Q6UXV1 221 aa-0.01□□□□□ -2.41
CHD9-207ENST00000562806 LYG2Q86SG7 212 aa-0.01□□□□□ -2.41
CHD9-207ENST00000562806 SMIM20Q8N5G0 67 aa-0.01□□□□□ -2.41
CHD9-207ENST00000562806 AP3S1Q92572 193 aa-0.01□□□□□ -2.41
CHD9-207ENST00000562806 ISOC1Q96CN7 298 aa-0.01□□□□□ -2.41
CHD9-207ENST00000562806 BORCS8Q96FH0 119 aa-0.01□□□□□ -2.41
CHD9-207ENST00000562806 CIB3Q96Q77 187 aaPredicted RBP-0.01□□□□□ -2.41
CHD9-207ENST00000562806 OTORQ9NRC9 128 aa-0.01□□□□□ -2.41
CHD9-207ENST00000562806 NUBP2Q9Y5Y2 271 aa-0.01□□□□□ -2.41
CHD9-207ENST00000562806 MYH2Q9UKX2 1941 aa-0.01□□□□□ -2.41
CHD9-207ENST00000562806 TRAPPC8Q9Y2L5 1435 aa-0.02□□□□□ -2.41
CHD9-207ENST00000562806 DSPPQ9NZW4 1301 aa-0.02□□□□□ -2.41
CHD9-207ENST00000562806 ARL5CA6NH57 179 aa-0.02□□□□□ -2.41
CHD9-207ENST00000562806 BBIP1A8MTZ0 92 aa-0.02□□□□□ -2.41
CHD9-207ENST00000562806 TPT1P13693 172 aaKnown RBP-0.02□□□□□ -2.41
CHD9-207ENST00000562806 ASB16-AS1Q495Z4 193 aa-0.02□□□□□ -2.41
CHD9-207ENST00000562806 CCSMST1Q4G0I0 132 aa-0.02□□□□□ -2.41
CHD9-207ENST00000562806 C3orf62Q6ZUJ4 267 aa-0.02□□□□□ -2.41
CHD9-207ENST00000562806 DEFB132Q7Z7B7 95 aa-0.02□□□□□ -2.41
CHD9-207ENST00000562806 STX19Q8N4C7 294 aa-0.02□□□□□ -2.41
CHD9-207ENST00000562806 TCTEX1D1Q8N7M0 179 aa-0.02□□□□□ -2.41
CHD9-207ENST00000562806 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.02□□□□□ -2.41
CHD9-207ENST00000562806 TMEM229BQ8NBD8 167 aa-0.02□□□□□ -2.41
CHD9-207ENST00000562806 HOPXQ9BPY8 73 aaPredicted RBP-0.02□□□□□ -2.41
CHD9-207ENST00000562806 LRTM1Q9HBL6 345 aa-0.02□□□□□ -2.41
CHD9-207ENST00000562806 MRPL35Q9NZE8 188 aaKnown RBP-0.02□□□□□ -2.41
CHD9-207ENST00000562806 MED11Q9P086 117 aa-0.02□□□□□ -2.41
CHD9-207ENST00000562806 UFC1Q9Y3C8 167 aa-0.02□□□□□ -2.41
CHD9-207ENST00000562806 MUC12Q9UKN1 5478 aa-0.02□□□□□ -2.41
CHD9-207ENST00000562806 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.02□□□□□ -2.41
CHD9-207ENST00000562806 YTHDC2Q9H6S0 1430 aaKnown RBP-0.03□□□□□ -2.41
CHD9-207ENST00000562806 ZDBF2Q9HCK1 2354 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 TRDV1A0A1B0GX56 115 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 A0A1W2PPB8 328 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 A0A1W2PRS3 328 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 KIR3DP1A8MWS1 328 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 H7BYZ3 331 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 CD3DP04234 171 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 SAA1P0DJI8 122 aaPredicted RBP-0.03□□□□□ -2.41
CHD9-207ENST00000562806 FABP2P12104 132 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 GLRXP35754 106 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 TAS2R41P59536 307 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 DNAJB13P59910 316 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 ANGPTL5Q86XS5 388 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 ZGRF1Q86YA3 2104 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 FAM24BQ8N5W8 94 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 OR5H6Q8NGV6 325 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 LINC00208Q96KT6 92 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 PRELID3AQ96N28 172 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 BIN3Q9NQY0 253 aa-0.03□□□□□ -2.41
CHD9-207ENST00000562806 TCOF1Q13428 1488 aaKnown RBP-0.03□□□□□ -2.41
CHD9-207ENST00000562806 MYH3P11055 1940 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 NBDYA0A0U1RRE5 68 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 HIGD1CA8MV81 97 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 IGF2P01344 180 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 SDC2P34741 201 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 MAXP61244 160 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 BASP1P80723 227 aaKnown RBP-0.04□□□□□ -2.42
CHD9-207ENST00000562806 FXYD3Q14802 87 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 ZNF56Q15929 161 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 C3orf33Q6P1S2 294 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 CSAG1Q6PB30 78 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 DYDC1Q8WWB3 177 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 CLEC2BQ92478 149 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 BOLA2Q9H3K6 86 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 C19orf12Q9NSK7 152 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 LAMTOR2Q9Y2Q5 125 aa-0.04□□□□□ -2.42
CHD9-207ENST00000562806 MPC1Q9Y5U8 109 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms