RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 LINC00173Q6ZV60 143 aa3.31□□□□□ -1.88
HMGB3P26-201ENST00000560051 BAGE3Q86Y29 109 aa3.31□□□□□ -1.88
HMGB3P26-201ENST00000560051 BAGE2Q86Y30 109 aa3.31□□□□□ -1.88
HMGB3P26-201ENST00000560051 FAM216BQ8N7L0 139 aa3.31□□□□□ -1.88
HMGB3P26-201ENST00000560051 NRACQ8N912 160 aa3.31□□□□□ -1.88
HMGB3P26-201ENST00000560051 OR8B2Q96RD0 313 aa3.31□□□□□ -1.88
HMGB3P26-201ENST00000560051 UPK3BQ9BT76 320 aa3.31□□□□□ -1.88
HMGB3P26-201ENST00000560051 GABARAPL1Q9H0R8 117 aa3.31□□□□□ -1.88
HMGB3P26-201ENST00000560051 DYNLRB1Q9NP97 96 aa3.31□□□□□ -1.88
HMGB3P26-201ENST00000560051 TP73-AS1Q9UF72 201 aa3.31□□□□□ -1.88
HMGB3P26-201ENST00000560051 MYO5AQ9Y4I1 1855 aaKnown RBP3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 KIAA1210Q9ULL0 1709 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 TOPAZ1Q8N9V7 1692 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 IGKV1-9A0A0C4DH69 117 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 J3QLW9 94 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 BMPR1BO00238 502 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 TSHBP01222 138 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 C3orf79P0CE67 100 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 CD28P10747 220 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 FUSP35637 526 aaKnown RBP eCLIP3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 LINC00205P59089 165 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 RPL18Q07020 188 aaKnown RBP3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 ZNF791Q3KP31 576 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 FAM104BQ5XKR9 115 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 RPL7L1Q6DKI1 246 aaKnown RBP3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 SUMO4Q6EEV6 95 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 SLC48A1Q6P1K1 146 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 Q6P435 159 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 TMEM252Q8N6L7 170 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 MPLKIPQ8TAP9 179 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 TMEM190Q8WZ59 177 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 FAM104AQ969W3 186 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 Q9H3A6 140 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 MRPL35Q9NZE8 188 aaKnown RBP3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 ZNF581Q9P0T4 197 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 ZNF706Q9Y5V0 76 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 TRPM7Q96QT4 1865 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 NWD2Q9ULI1 1742 aa3.3□□□□□ -1.88
HMGB3P26-201ENST00000560051 ASXL1Q8IXJ9 1541 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 ZNF646O15015 1829 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 IGLV5-37A0A075B6J1 123 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 TRAV1-1A0A0B4J248 108 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 IGHV3-38A0A0C4DH36 116 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 A0A1W2PS18 150 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 NUPR1O60356 82 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 APCSP02743 223 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 CCKP06307 115 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 RPL27AP46776 148 aaKnown RBP3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 KLF9Q13886 244 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 Q1T7F1 81 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 C17orf58Q2M2W7 97 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 LAIR2Q6ISS4 152 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 CXCL17Q6UXB2 119 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 MIR17HGQ75NE6 70 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 NFE4Q86UQ8 179 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 Q8N8P6 123 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 CSNK1G2-AS1Q8NCQ2 148 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 NMES1Q9C002 83 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 CXCL16Q9H2A7 254 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 KLK13Q9UKR3 277 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 MYOM1P52179 1685 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 ARHGEF5Q12774 1597 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 TRPM6Q9BX84 2022 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 AGLP35573 1532 aa3.29□□□□□ -1.88
HMGB3P26-201ENST00000560051 AFDNP55196 1824 aaKnown RBP3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 USP54Q70EL1 1684 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 IGHV3OR16-10A0A075B7F0 116 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 IGHV3-74A0A0B4J1X5 117 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 TRAV3A0A0B4J244 114 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 TCRBV4S1A1TA0A5B7 111 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 K7EQG2 157 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 K7ERJ3 54 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 SERF1AO75920 110 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 IGKV2-30P06310 120 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 COX7A1P24310 79 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 TFF2Q03403 129 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 CCL14Q16627 93 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 RSPO1Q2MKA7 263 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 DEFB121Q5J5C9 76 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 ADAMTSL4-AS1Q5T5F5 129 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 ZC2HC1BQ5TFG8 222 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 C6orf201Q7Z4U5 140 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 MARCH3Q86UD3 253 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 TMEM256Q8N2U0 113 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 CYB561D1Q8N8Q1 229 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 WFDC5Q8TCV5 224 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 DYNLRB2Q8TF09 96 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 SMIM4Q8WVI0 70 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 ODF3Q96PU9 254 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 SMIM14Q96QK8 99 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 SCGB3A1Q96QR1 104 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 LINC00467Q9BRT7 94 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 CCL28Q9NRJ3 127 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 USP32Q8NFA0 1604 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 EXPH5Q8NEV8 1989 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 PTPRDP23468 1912 aa3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 NYNRINQ9P2P1 1898 aaKnown RBP3.28□□□□□ -1.88
HMGB3P26-201ENST00000560051 SIPA1L3O60292 1781 aaPredicted RBP3.28□□□□□ -1.89
HMGB3P26-201ENST00000560051 ARFGEF2Q9Y6D5 1785 aa3.28□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms