RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 F5H768 121 aa12.4□□□□□ -0.42
SMAD3-210ENST00000559092 CRISP2P16562 243 aa12.4□□□□□ -0.42
SMAD3-210ENST00000559092 TAS2R45P59539 299 aa12.4□□□□□ -0.42
SMAD3-210ENST00000559092 LINC00467Q9BRT7 94 aa12.4□□□□□ -0.42
SMAD3-210ENST00000559092 SMIM3Q9BZL3 60 aa12.4□□□□□ -0.42
SMAD3-210ENST00000559092 TRBV7-9A0A0J9YWB2 115 aa12.39□□□□□ -0.43
SMAD3-210ENST00000559092 C7orf71A4D174 169 aa12.39□□□□□ -0.43
SMAD3-210ENST00000559092 J3KRW8 73 aa12.39□□□□□ -0.43
SMAD3-210ENST00000559092 OR7C2O60412 319 aa12.39□□□□□ -0.43
SMAD3-210ENST00000559092 OR10J4P0C629 311 aa12.39□□□□□ -0.43
SMAD3-210ENST00000559092 FAM3BP58499 235 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-210ENST00000559092 TMEM78Q5T7P6 136 aa12.39□□□□□ -0.43
SMAD3-210ENST00000559092 FAM122CQ6P4D5 195 aa12.39□□□□□ -0.43
SMAD3-210ENST00000559092 UBE2DNLQ8IWF7 75 aa12.39□□□□□ -0.43
SMAD3-210ENST00000559092 LINC00612Q8N6U2 182 aa12.39□□□□□ -0.43
SMAD3-210ENST00000559092 WFDC1Q9HC57 220 aa12.39□□□□□ -0.43
SMAD3-210ENST00000559092 HECTD4Q9Y4D8 3996 aa12.39□□□□□ -0.43
SMAD3-210ENST00000559092 SNURFLB1AK76 121 aa12.38□□□□□ -0.43
SMAD3-210ENST00000559092 ZNF324O75467 553 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-210ENST00000559092 CSN1S1P47710 185 aa12.38□□□□□ -0.43
SMAD3-210ENST00000559092 DAZ2Q13117 558 aaKnown RBP12.38□□□□□ -0.43
SMAD3-210ENST00000559092 LGALS9BQ3B8N2 356 aa12.38□□□□□ -0.43
SMAD3-210ENST00000559092 KHDC3LQ587J8 217 aa12.38□□□□□ -0.43
SMAD3-210ENST00000559092 ASB13Q8WXK3 278 aa12.38□□□□□ -0.43
SMAD3-210ENST00000559092 ZNF503Q96F45 646 aa12.38□□□□□ -0.43
SMAD3-210ENST00000559092 MED28Q9H204 178 aa12.38□□□□□ -0.43
SMAD3-210ENST00000559092 RBAKDNA6NC62 111 aa12.37□□□□□ -0.43
SMAD3-210ENST00000559092 GPX1P07203 203 aa12.37□□□□□ -0.43
SMAD3-210ENST00000559092 RANP62826 216 aaKnown RBP12.37□□□□□ -0.43
SMAD3-210ENST00000559092 ACOT6Q3I5F7 207 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-210ENST00000559092 LINC00336Q6ZUF6 198 aa12.37□□□□□ -0.43
SMAD3-210ENST00000559092 ZNF680Q8NEM1 530 aa12.37□□□□□ -0.43
SMAD3-210ENST00000559092 PHYHIPLQ96FC7 376 aa12.37□□□□□ -0.43
SMAD3-210ENST00000559092 VGLL1Q99990 258 aa12.37□□□□□ -0.43
SMAD3-210ENST00000559092 ZNF492Q9P255 531 aa12.37□□□□□ -0.43
SMAD3-210ENST00000559092 IGKV2-40A0A087WW87 121 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-210ENST00000559092 IGKV2D-40P01614 121 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-210ENST00000559092 M6PRP20645 277 aa12.36□□□□□ -0.43
SMAD3-210ENST00000559092 RNASE4P34096 147 aaKnown RBP12.36□□□□□ -0.43
SMAD3-210ENST00000559092 ZNF138P52744 262 aa12.36□□□□□ -0.43
SMAD3-210ENST00000559092 UBE2L3P68036 154 aaKnown RBP12.36□□□□□ -0.43
SMAD3-210ENST00000559092 CD300CQ08708 224 aa12.36□□□□□ -0.43
SMAD3-210ENST00000559092 ANXA2RQ3ZCQ2 193 aa12.36□□□□□ -0.43
SMAD3-210ENST00000559092 RXFP4Q8TDU9 374 aa12.36□□□□□ -0.43
SMAD3-210ENST00000559092 A0A1W2PPV4 95 aa12.35□□□□□ -0.43
SMAD3-210ENST00000559092 ZNF266Q14584 549 aa12.35□□□□□ -0.43
SMAD3-210ENST00000559092 PQLC2Q6ZP29 291 aa12.35□□□□□ -0.43
SMAD3-210ENST00000559092 EIF4E3Q8N5X7 224 aaKnown RBP12.35□□□□□ -0.43
SMAD3-210ENST00000559092 ZFAND2AQ8N6M9 145 aa12.35□□□□□ -0.43
SMAD3-210ENST00000559092 AQP10Q96PS8 301 aa12.35□□□□□ -0.43
SMAD3-210ENST00000559092 Q9H3A6 140 aa12.35□□□□□ -0.43
SMAD3-210ENST00000559092 BTN1A1Q13410 526 aa12.34□□□□□ -0.43
SMAD3-210ENST00000559092 ATG101Q9BSB4 218 aa12.34□□□□□ -0.43
SMAD3-210ENST00000559092 GAGE12BA1L429 117 aa12.33□□□□□ -0.44
SMAD3-210ENST00000559092 GAGE7O76087 117 aa12.33□□□□□ -0.44
SMAD3-210ENST00000559092 GAGE12FP0CL80 117 aa12.33□□□□□ -0.44
SMAD3-210ENST00000559092 GAGE12GP0CL81 117 aa12.33□□□□□ -0.44
SMAD3-210ENST00000559092 GAGE12IP0CL82 117 aa12.33□□□□□ -0.44
SMAD3-210ENST00000559092 Q6ZR54 194 aa12.33□□□□□ -0.44
SMAD3-210ENST00000559092 ARL6IP6Q8N6S5 226 aa12.33□□□□□ -0.44
SMAD3-210ENST00000559092 C11orf72Q8NBR9 251 aa12.33□□□□□ -0.44
SMAD3-210ENST00000559092 C18orf15Q96N68 181 aa12.33□□□□□ -0.44
SMAD3-210ENST00000559092 OTORQ9NRC9 128 aa12.33□□□□□ -0.44
SMAD3-210ENST00000559092 LENEPQ9Y5L5 61 aa12.33□□□□□ -0.44
SMAD3-210ENST00000559092 DNAH2Q9P225 4427 aa12.32□□□□□ -0.44
SMAD3-210ENST00000559092 DIRC3C9JPN6 131 aa12.32□□□□□ -0.44
SMAD3-210ENST00000559092 M0R2N4 97 aa12.32□□□□□ -0.44
SMAD3-210ENST00000559092 NUDT3O95989 172 aa12.32□□□□□ -0.44
SMAD3-210ENST00000559092 GIPP09681 153 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-210ENST00000559092 FAM74A1Q5RGS3 127 aa12.32□□□□□ -0.44
SMAD3-210ENST00000559092 IBA57Q5T440 356 aaKnown RBP12.32□□□□□ -0.44
SMAD3-210ENST00000559092 OR10G4Q8NGN3 311 aa12.32□□□□□ -0.44
SMAD3-210ENST00000559092 OR10G9Q8NGN4 311 aa12.32□□□□□ -0.44
SMAD3-210ENST00000559092 OR10G7Q8NGN6 311 aa12.32□□□□□ -0.44
SMAD3-210ENST00000559092 OR2G3Q8NGZ4 309 aa12.32□□□□□ -0.44
SMAD3-210ENST00000559092 TMED6Q8WW62 240 aa12.32□□□□□ -0.44
SMAD3-210ENST00000559092 GSN-AS1Q9NRJ2 163 aa12.32□□□□□ -0.44
SMAD3-210ENST00000559092 H3BNG1 76 aa12.31□□□□□ -0.44
SMAD3-210ENST00000559092 RGS13O14921 159 aa12.31□□□□□ -0.44
SMAD3-210ENST00000559092 CCL18P55774 89 aa12.31□□□□□ -0.44
SMAD3-210ENST00000559092 OR5I1Q13606 314 aa12.31□□□□□ -0.44
SMAD3-210ENST00000559092 PSMG3Q9BT73 122 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-210ENST00000559092 IGHV1OR15-1A0A075B7D0 117 aa12.3□□□□□ -0.44
SMAD3-210ENST00000559092 PGPA6NDG6 321 aa12.3□□□□□ -0.44
SMAD3-210ENST00000559092 MBP02144 154 aa12.3□□□□□ -0.44
SMAD3-210ENST00000559092 TCL1AP56279 114 aa12.3□□□□□ -0.44
SMAD3-210ENST00000559092 RAB2AP61019 212 aa12.3□□□□□ -0.44
SMAD3-210ENST00000559092 SERF2P84101 59 aa12.3□□□□□ -0.44
SMAD3-210ENST00000559092 PRR9Q5T870 116 aa12.3□□□□□ -0.44
SMAD3-210ENST00000559092 Q6ZTI0 123 aa12.3□□□□□ -0.44
SMAD3-210ENST00000559092 INO80EQ8NBZ0 244 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-210ENST00000559092 CMTM2Q8TAZ6 248 aa12.3□□□□□ -0.44
SMAD3-210ENST00000559092 GNPNAT1Q96EK6 184 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-210ENST00000559092 FAT2Q9NYQ8 4349 aa12.29□□□□□ -0.44
SMAD3-210ENST00000559092 IGLV2-18A0A075B6J9 118 aa12.29□□□□□ -0.44
SMAD3-210ENST00000559092 TRGV2A0A075B6R0 118 aa12.29□□□□□ -0.44
SMAD3-210ENST00000559092 TRAV26-1A0A087WT03 109 aa12.29□□□□□ -0.44
SMAD3-210ENST00000559092 SPINK4O60575 86 aa12.29□□□□□ -0.44
SMAD3-210ENST00000559092 HSD17B11Q8NBQ5 300 aa12.29□□□□□ -0.44
SMAD3-210ENST00000559092 Q8TAT8 98 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms