RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 ATP6V0E2Q8NHE4 81 aa6.69□□□□□ -1.34
TRAV33-201ENST00000557514 CIB3Q96Q77 187 aaPredicted RBP6.69□□□□□ -1.34
TRAV33-201ENST00000557514 ARL6Q9H0F7 186 aa6.69□□□□□ -1.34
TRAV33-201ENST00000557514 COMMD3Q9UBI1 195 aa6.69□□□□□ -1.34
TRAV33-201ENST00000557514 GPR132Q9UNW8 380 aa6.69□□□□□ -1.34
TRAV33-201ENST00000557514 COX11Q9Y6N1 276 aa6.69□□□□□ -1.34
TRAV33-201ENST00000557514 TRAV4A0A0B4J268 109 aa6.68□□□□□ -1.34
TRAV33-201ENST00000557514 H3BQ15 152 aa6.68□□□□□ -1.34
TRAV33-201ENST00000557514 NMBP08949 121 aa6.68□□□□□ -1.34
TRAV33-201ENST00000557514 RPP30P78346 268 aaKnown RBP6.68□□□□□ -1.34
TRAV33-201ENST00000557514 ERCC8Q13216 396 aa6.68□□□□□ -1.34
TRAV33-201ENST00000557514 Q6ZQT7 251 aa6.68□□□□□ -1.34
TRAV33-201ENST00000557514 LINC00305Q7Z4B0 112 aa6.68□□□□□ -1.34
TRAV33-201ENST00000557514 MRPL53Q96EL3 112 aaKnown RBP6.68□□□□□ -1.34
TRAV33-201ENST00000557514 SMCO3A2RU48 225 aa6.67□□□□□ -1.34
TRAV33-201ENST00000557514 H3BP45 60 aa6.67□□□□□ -1.34
TRAV33-201ENST00000557514 M0R3E3 92 aa6.67□□□□□ -1.34
TRAV33-201ENST00000557514 PFN1P07737 140 aaKnown RBP6.67□□□□□ -1.34
TRAV33-201ENST00000557514 GATA1P15976 413 aaPredicted RBP6.67□□□□□ -1.34
TRAV33-201ENST00000557514 SRPXP78539 464 aa6.67□□□□□ -1.34
TRAV33-201ENST00000557514 TOR2AQ5JU69 321 aa6.67□□□□□ -1.34
TRAV33-201ENST00000557514 PXDC1Q5TGL8 231 aa6.67□□□□□ -1.34
TRAV33-201ENST00000557514 IZUMO2Q6UXV1 221 aa6.67□□□□□ -1.34
TRAV33-201ENST00000557514 OR51S1Q8NGJ8 323 aa6.67□□□□□ -1.34
TRAV33-201ENST00000557514 LINC01600Q96MT4 127 aa6.67□□□□□ -1.34
TRAV33-201ENST00000557514 KCNIP3Q9Y2W7 256 aa6.67□□□□□ -1.34
TRAV33-201ENST00000557514 HPGDSO60760 199 aa6.66□□□□□ -1.34
TRAV33-201ENST00000557514 ZNF253O75346 499 aa6.66□□□□□ -1.34
TRAV33-201ENST00000557514 MED6O75586 246 aa6.66□□□□□ -1.34
TRAV33-201ENST00000557514 GPX1P07203 203 aa6.66□□□□□ -1.34
TRAV33-201ENST00000557514 GUK1Q16774 197 aa6.66□□□□□ -1.34
TRAV33-201ENST00000557514 LINC00477Q96M19 166 aa6.66□□□□□ -1.34
TRAV33-201ENST00000557514 AGPAT4-IT1Q9H0P7 198 aa6.66□□□□□ -1.34
TRAV33-201ENST00000557514 DUXBA0A1W2PPF3 345 aa6.65□□□□□ -1.34
TRAV33-201ENST00000557514 FABP12A6NFH5 140 aa6.65□□□□□ -1.34
TRAV33-201ENST00000557514 WRBO00258 174 aa6.65□□□□□ -1.34
TRAV33-201ENST00000557514 SYNGR2O43760 224 aa6.65□□□□□ -1.34
TRAV33-201ENST00000557514 SLC25A6P12236 298 aa6.65□□□□□ -1.34
TRAV33-201ENST00000557514 SLC38A11Q08AI6 406 aa6.65□□□□□ -1.34
TRAV33-201ENST00000557514 SPANXN5Q5MJ07 72 aa6.65□□□□□ -1.34
TRAV33-201ENST00000557514 DAZ4Q86SG3 579 aaKnown RBP6.65□□□□□ -1.34
TRAV33-201ENST00000557514 HSD17B11Q8NBQ5 300 aa6.65□□□□□ -1.34
TRAV33-201ENST00000557514 OR4C5Q8NGB2 326 aa6.65□□□□□ -1.34
TRAV33-201ENST00000557514 SPXQ9BT56 116 aa6.65□□□□□ -1.34
TRAV33-201ENST00000557514 SRRQ9GZT4 340 aa6.65□□□□□ -1.34
TRAV33-201ENST00000557514 DAZ3Q9NR90 486 aaKnown RBP6.65□□□□□ -1.34
TRAV33-201ENST00000557514 STRAPQ9Y3F4 350 aaKnown RBP6.65□□□□□ -1.34
TRAV33-201ENST00000557514 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.65□□□□□ -1.34
TRAV33-201ENST00000557514 TRAV8-1A0A0A6YYK1 113 aa6.64□□□□□ -1.35
TRAV33-201ENST00000557514 A0A0D9SG52 128 aa6.64□□□□□ -1.35
TRAV33-201ENST00000557514 DISC1C4P0D8 188 aa6.64□□□□□ -1.35
TRAV33-201ENST00000557514 NEDD8Q15843 81 aa6.64□□□□□ -1.35
TRAV33-201ENST00000557514 ZNF546Q86UE3 836 aa6.64□□□□□ -1.35
TRAV33-201ENST00000557514 RMI2Q96E14 147 aa6.64□□□□□ -1.35
TRAV33-201ENST00000557514 PRRT1Q99946 306 aa6.64□□□□□ -1.35
TRAV33-201ENST00000557514 GTSF1LQ9H1H1 148 aa6.64□□□□□ -1.35
TRAV33-201ENST00000557514 PIGBOS1A0A0B4J2F0 54 aa6.63□□□□□ -1.35
TRAV33-201ENST00000557514 IGHV3-16A0A0C4DH30 117 aa6.63□□□□□ -1.35
TRAV33-201ENST00000557514 GGTLC3B5MD39 225 aa6.63□□□□□ -1.35
TRAV33-201ENST00000557514 FNDC10F2Z333 226 aa6.63□□□□□ -1.35
TRAV33-201ENST00000557514 PANO1I0J062 215 aa6.63□□□□□ -1.35
TRAV33-201ENST00000557514 COX7A2P2O60397 106 aa6.63□□□□□ -1.35
TRAV33-201ENST00000557514 ANXA3P12429 323 aa6.63□□□□□ -1.35
TRAV33-201ENST00000557514 SSBP1Q04837 148 aaKnown RBP6.63□□□□□ -1.35
TRAV33-201ENST00000557514 MUC21Q5SSG8 566 aa6.63□□□□□ -1.35
TRAV33-201ENST00000557514 FAM122CQ6P4D5 195 aa6.63□□□□□ -1.35
TRAV33-201ENST00000557514 SLC25A29Q8N8R3 303 aa6.63□□□□□ -1.35
TRAV33-201ENST00000557514 DNAJC30Q96LL9 226 aa6.63□□□□□ -1.35
TRAV33-201ENST00000557514 RAB26Q9ULW5 256 aa6.63□□□□□ -1.35
TRAV33-201ENST00000557514 TRBV19A0A075B6N1 114 aa6.62□□□□□ -1.35
TRAV33-201ENST00000557514 IGKV2D-24A0A075B6R9 120 aa6.62□□□□□ -1.35
TRAV33-201ENST00000557514 IGKV2-40A0A087WW87 121 aaPredicted RBP6.62□□□□□ -1.35
TRAV33-201ENST00000557514 IGKV2D-40P01614 121 aaPredicted RBP6.62□□□□□ -1.35
TRAV33-201ENST00000557514 LSM3P62310 102 aaKnown RBP6.62□□□□□ -1.35
TRAV33-201ENST00000557514 POLR2GP62487 172 aaKnown RBP eCLIP6.62□□□□□ -1.35
TRAV33-201ENST00000557514 RHOHQ15669 191 aa6.62□□□□□ -1.35
TRAV33-201ENST00000557514 BAK1Q16611 211 aa6.62□□□□□ -1.35
TRAV33-201ENST00000557514 C14orf177Q52M58 125 aa6.62□□□□□ -1.35
TRAV33-201ENST00000557514 FFAR4Q5NUL3 377 aa6.62□□□□□ -1.35
TRAV33-201ENST00000557514 LCE2AQ5TA79 106 aaPredicted RBP6.62□□□□□ -1.35
TRAV33-201ENST00000557514 YIPF6Q96EC8 236 aa6.62□□□□□ -1.35
TRAV33-201ENST00000557514 VCX3BQ9H321 246 aa6.62□□□□□ -1.35
TRAV33-201ENST00000557514 DPH3P1Q9H4G8 78 aa6.62□□□□□ -1.35
TRAV33-201ENST00000557514 EXTL2Q9UBQ6 330 aa6.62□□□□□ -1.35
TRAV33-201ENST00000557514 PRELID1Q9Y255 219 aa6.62□□□□□ -1.35
TRAV33-201ENST00000557514 TRGV11A0A075B6L2 103 aa6.61□□□□□ -1.35
TRAV33-201ENST00000557514 TRBV7-9A0A0J9YWB2 115 aa6.61□□□□□ -1.35
TRAV33-201ENST00000557514 A0A0J9YXV3 536 aa6.61□□□□□ -1.35
TRAV33-201ENST00000557514 TRBV6-4A0A1B0GX49 114 aa6.61□□□□□ -1.35
TRAV33-201ENST00000557514 FAM25AB3EWG3 89 aa6.61□□□□□ -1.35
TRAV33-201ENST00000557514 FAM25CB3EWG5 89 aa6.61□□□□□ -1.35
TRAV33-201ENST00000557514 FAM25GB3EWG6 89 aa6.61□□□□□ -1.35
TRAV33-201ENST00000557514 M0R2P5 195 aa6.61□□□□□ -1.35
TRAV33-201ENST00000557514 NDUFB4O95168 129 aa6.61□□□□□ -1.35
TRAV33-201ENST00000557514 RRAS2P62070 204 aaPredicted RBP6.61□□□□□ -1.35
TRAV33-201ENST00000557514 TMEM183BQ1AE95 376 aa6.61□□□□□ -1.35
TRAV33-201ENST00000557514 TMEM78Q5T7P6 136 aa6.61□□□□□ -1.35
TRAV33-201ENST00000557514 C10orf113Q5VZT2 155 aa6.61□□□□□ -1.35
TRAV33-201ENST00000557514 ATRAIDQ6UW56 229 aa6.61□□□□□ -1.35
TRAV33-201ENST00000557514 TMEM183AQ8IXX5 376 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms