RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 GFI1BQ5VTD9 330 aa9.49□□□□□ -0.89
NEK9-210ENST00000557026 GBF1Q92538 1859 aa9.49□□□□□ -0.89
NEK9-210ENST00000557026 COX11Q9Y6N1 276 aa9.49□□□□□ -0.89
NEK9-210ENST00000557026 LHBP01229 141 aa9.49□□□□□ -0.89
NEK9-210ENST00000557026 SMAD5-AS1Q9Y6J3 95 aa9.49□□□□□ -0.89
NEK9-210ENST00000557026 ZNF318Q5VUA4 2279 aa9.48□□□□□ -0.89
NEK9-210ENST00000557026 IGHV4-39P01824 125 aa9.48□□□□□ -0.89
NEK9-210ENST00000557026 C14orf144Q96I85 54 aa9.48□□□□□ -0.89
NEK9-210ENST00000557026 VWA8A3KMH1 1905 aa9.48□□□□□ -0.89
NEK9-210ENST00000557026 SHISA2Q6UWI4 295 aa9.48□□□□□ -0.89
NEK9-210ENST00000557026 ZNRF2Q8NHG8 242 aa9.48□□□□□ -0.89
NEK9-210ENST00000557026 PLXNA4Q9HCM2 1894 aa9.48□□□□□ -0.89
NEK9-210ENST00000557026 DKK1O94907 266 aa9.48□□□□□ -0.89
NEK9-210ENST00000557026 Q0VG73 95 aa9.48□□□□□ -0.89
NEK9-210ENST00000557026 FHL1Q13642 323 aa9.48□□□□□ -0.89
NEK9-210ENST00000557026 C16orf54Q6UWD8 224 aa9.48□□□□□ -0.89
NEK9-210ENST00000557026 WFDC12Q8WWY7 111 aa9.48□□□□□ -0.89
NEK9-210ENST00000557026 IGHV4-61A0A0C4DH41 118 aa9.48□□□□□ -0.89
NEK9-210ENST00000557026 NCR2O95944 276 aa9.48□□□□□ -0.89
NEK9-210ENST00000557026 STPG4Q8N801 248 aa9.48□□□□□ -0.89
NEK9-210ENST00000557026 C4orf3Q8WVX3 66 aa9.48□□□□□ -0.89
NEK9-210ENST00000557026 ABCA4P78363 2273 aa9.48□□□□□ -0.89
NEK9-210ENST00000557026 SDHAF1A6NFY7 115 aa9.47□□□□□ -0.89
NEK9-210ENST00000557026 IGHV4-59P01825 116 aa9.47□□□□□ -0.89
NEK9-210ENST00000557026 C2orf66Q6UXQ4 117 aa9.47□□□□□ -0.89
NEK9-210ENST00000557026 Q6ZSR3 168 aa9.47□□□□□ -0.89
NEK9-210ENST00000557026 NDUFA11Q86Y39 141 aa9.47□□□□□ -0.89
NEK9-210ENST00000557026 GPHB5Q86YW7 130 aa9.47□□□□□ -0.89
NEK9-210ENST00000557026 VSIRQ9H7M9 311 aa9.47□□□□□ -0.89
NEK9-210ENST00000557026 CEP250Q9BV73 2442 aa9.47□□□□□ -0.89
NEK9-210ENST00000557026 KIF26BQ2KJY2 2108 aa9.47□□□□□ -0.89
NEK9-210ENST00000557026 ADORA2A-AS1P86434 159 aa9.47□□□□□ -0.89
NEK9-210ENST00000557026 VOPP1Q96AW1 172 aa9.47□□□□□ -0.89
NEK9-210ENST00000557026 TRBV20-1A0A075B6N2 111 aa9.47□□□□□ -0.89
NEK9-210ENST00000557026 NDUFAF3Q9BU61 184 aa9.47□□□□□ -0.89
NEK9-210ENST00000557026 SPRY4Q9C004 299 aa9.47□□□□□ -0.89
NEK9-210ENST00000557026 CACNA1IQ9P0X4 2223 aa9.47□□□□□ -0.89
NEK9-210ENST00000557026 A0A087WWL8 130 aa9.47□□□□□ -0.89
NEK9-210ENST00000557026 MED14OSP0DP75 135 aa9.47□□□□□ -0.89
NEK9-210ENST00000557026 DAZ2Q13117 558 aaKnown RBP9.46□□□□□ -0.89
NEK9-210ENST00000557026 DAZ4Q86SG3 579 aaKnown RBP9.46□□□□□ -0.89
NEK9-210ENST00000557026 PIFOQ8TCI5 191 aa9.46□□□□□ -0.89
NEK9-210ENST00000557026 C11orf52Q96A22 123 aa9.46□□□□□ -0.89
NEK9-210ENST00000557026 DAZ3Q9NR90 486 aaKnown RBP9.46□□□□□ -0.89
NEK9-210ENST00000557026 IGKV1-6A0A0C4DH72 117 aa9.46□□□□□ -0.9
NEK9-210ENST00000557026 SOCS3O14543 225 aa9.46□□□□□ -0.9
NEK9-210ENST00000557026 MMP23AO75900 390 aa9.46□□□□□ -0.9
NEK9-210ENST00000557026 CXCL5P42830 114 aa9.46□□□□□ -0.9
NEK9-210ENST00000557026 ANXA2RQ3ZCQ2 193 aa9.46□□□□□ -0.9
NEK9-210ENST00000557026 WDR86Q86TI4 376 aa9.46□□□□□ -0.9
NEK9-210ENST00000557026 TP53TG1Q9Y2A0 90 aa9.46□□□□□ -0.9
NEK9-210ENST00000557026 TAL2Q16559 108 aa9.45□□□□□ -0.9
NEK9-210ENST00000557026 IGHV4-30-2A0A087WSY4 118 aa9.45□□□□□ -0.9
NEK9-210ENST00000557026 H3BUT2 72 aa9.45□□□□□ -0.9
NEK9-210ENST00000557026 ESDP10768 282 aa9.45□□□□□ -0.9
NEK9-210ENST00000557026 TMEM95Q3KNT9 176 aa9.45□□□□□ -0.9
NEK9-210ENST00000557026 PI4KAP42356 2102 aa9.45□□□□□ -0.9
NEK9-210ENST00000557026 CD5LO43866 347 aa9.45□□□□□ -0.9
NEK9-210ENST00000557026 ANGP03950 147 aaKnown RBP9.45□□□□□ -0.9
NEK9-210ENST00000557026 HLA-DRB4P13762 266 aa9.45□□□□□ -0.9
NEK9-210ENST00000557026 SAMD5Q5TGI4 173 aa9.45□□□□□ -0.9
NEK9-210ENST00000557026 HLA-DRB4X5D2U9 266 aa9.45□□□□□ -0.9
NEK9-210ENST00000557026 SYS1-DBNDD2H3BUS1 97 aa9.45□□□□□ -0.9
NEK9-210ENST00000557026 UTF1Q5T230 341 aa9.45□□□□□ -0.9
NEK9-210ENST00000557026 IGF2BP2-AS1Q96M15 143 aa9.45□□□□□ -0.9
NEK9-210ENST00000557026 GVINP1Q7Z2Y8 2422 aa9.44□□□□□ -0.9
NEK9-210ENST00000557026 TNFRSF13BO14836 293 aaPredicted RBP9.44□□□□□ -0.9
NEK9-210ENST00000557026 UBE2BP63146 152 aa9.44□□□□□ -0.9
NEK9-210ENST00000557026 RIF1Q5UIP0 2472 aaKnown RBP9.44□□□□□ -0.9
NEK9-210ENST00000557026 KRTAP27-1Q3LI81 207 aa9.44□□□□□ -0.9
NEK9-210ENST00000557026 MAPK1IP1LQ8NDC0 245 aa9.44□□□□□ -0.9
NEK9-210ENST00000557026 SMIM2Q9BVW6 85 aa9.44□□□□□ -0.9
NEK9-210ENST00000557026 WT1-ASQ06250 92 aa9.44□□□□□ -0.9
NEK9-210ENST00000557026 C2orf82Q6UX34 121 aa9.44□□□□□ -0.9
NEK9-210ENST00000557026 ZNF491Q8N8L2 437 aa9.44□□□□□ -0.9
NEK9-210ENST00000557026 SCN2AQ99250 2005 aa9.44□□□□□ -0.9
NEK9-210ENST00000557026 SDK2Q58EX2 2172 aa9.44□□□□□ -0.9
NEK9-210ENST00000557026 SMIM9A6NGZ8 99 aa9.44□□□□□ -0.9
NEK9-210ENST00000557026 RIPPLY3P57055 190 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 MRPL36Q9P0J6 103 aaKnown RBP9.43□□□□□ -0.9
NEK9-210ENST00000557026 HIST1H2BKO60814 126 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 HIST1H2BJP06899 126 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 HIST1H2BOP23527 126 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 HIST1H2BBP33778 126 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 HIST1H2BDP58876 126 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 HIST1H2BCP62807 126 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 HIST2H2BEQ16778 126 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.43□□□□□ -0.9
NEK9-210ENST00000557026 ZC2HC1BQ5TFG8 222 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 HIST1H2BHQ93079 126 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 HIST1H2BNQ99877 126 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 HIST1H2BMQ99879 126 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 ZNRD1Q9P1U0 126 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 GAGE2EQ4V326 116 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 GAGE2DQ9UEU5 116 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 FRMPD3Q5JV73 1810 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 KNCNA6PVL3 124 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 IGHG2P01859 326 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 CXCL1P09341 107 aa9.43□□□□□ -0.9
NEK9-210ENST00000557026 C1orf147Q96MC9 270 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms