RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 RPL35P42766 123 aaKnown RBP12.16□□□□□ -0.46
PCNX4-213ENST00000556907 DEFB131AP59861 70 aa12.16□□□□□ -0.46
PCNX4-213ENST00000556907 TMEM183BQ1AE95 376 aa12.16□□□□□ -0.46
PCNX4-213ENST00000556907 LINC00322Q6ZN03 302 aaPredicted RBP12.16□□□□□ -0.46
PCNX4-213ENST00000556907 GOLT1AQ6ZVE7 132 aa12.16□□□□□ -0.46
PCNX4-213ENST00000556907 FMC1Q96HJ9 113 aa12.16□□□□□ -0.46
PCNX4-213ENST00000556907 KLF12Q9Y4X4 402 aa12.16□□□□□ -0.46
PCNX4-213ENST00000556907 LOC102724200A0A096LPH7 203 aaPredicted RBP12.15□□□□□ -0.46
PCNX4-213ENST00000556907 FBLL1A6NHQ2 334 aaKnown RBP12.15□□□□□ -0.46
PCNX4-213ENST00000556907 ZNF727A8MUV8 499 aa12.15□□□□□ -0.46
PCNX4-213ENST00000556907 ZNF688P0C7X2 276 aa12.15□□□□□ -0.46
PCNX4-213ENST00000556907 NHLRC4P0CG21 123 aaPredicted RBP12.15□□□□□ -0.46
PCNX4-213ENST00000556907 TAS2R60P59551 318 aa12.15□□□□□ -0.46
PCNX4-213ENST00000556907 ZNF674Q2M3X9 581 aa12.15□□□□□ -0.46
PCNX4-213ENST00000556907 Q86TA4 180 aa12.15□□□□□ -0.46
PCNX4-213ENST00000556907 FAM24BQ8N5W8 94 aa12.15□□□□□ -0.46
PCNX4-213ENST00000556907 ZNF738Q8NE65 137 aa12.15□□□□□ -0.46
PCNX4-213ENST00000556907 IGF2BP2-AS1Q96M15 143 aa12.15□□□□□ -0.46
PCNX4-213ENST00000556907 ZNF705FA8MVS1 300 aaPredicted RBP12.14□□□□□ -0.47
PCNX4-213ENST00000556907 UBE2G1P62253 170 aa12.14□□□□□ -0.47
PCNX4-213ENST00000556907 PSMG4Q5JS54 123 aa12.14□□□□□ -0.47
PCNX4-213ENST00000556907 NIPSNAP3BQ9BS92 247 aa12.14□□□□□ -0.47
PCNX4-213ENST00000556907 WFDC10AQ9H1F0 79 aa12.14□□□□□ -0.47
PCNX4-213ENST00000556907 TRBV20OR9-2A0A075B6H5 130 aa12.13□□□□□ -0.47
PCNX4-213ENST00000556907 IGKV2-40A0A087WW87 121 aaPredicted RBP12.13□□□□□ -0.47
PCNX4-213ENST00000556907 KIR2DL5BA0A0G2JN68 375 aa12.13□□□□□ -0.47
PCNX4-213ENST00000556907 KIR2DL5BA0A0G2JPC4 375 aa12.13□□□□□ -0.47
PCNX4-213ENST00000556907 IGKV2D-40P01614 121 aaPredicted RBP12.13□□□□□ -0.47
PCNX4-213ENST00000556907 IGLV2-11P01706 119 aa12.13□□□□□ -0.47
PCNX4-213ENST00000556907 APOC4P55056 127 aa12.13□□□□□ -0.47
PCNX4-213ENST00000556907 CENPWQ5EE01 88 aa12.13□□□□□ -0.47
PCNX4-213ENST00000556907 APRG1Q8IVJ8 170 aa12.13□□□□□ -0.47
PCNX4-213ENST00000556907 KIR2DL5AQ8N109 375 aa12.13□□□□□ -0.47
PCNX4-213ENST00000556907 KIR2DL5BQ8NHK3 375 aa12.13□□□□□ -0.47
PCNX4-213ENST00000556907 NAT8Q9UHE5 227 aa12.13□□□□□ -0.47
PCNX4-213ENST00000556907 LY96Q9Y6Y9 160 aa12.13□□□□□ -0.47
PCNX4-213ENST00000556907 RBMY1BA6NDE4 496 aaKnown RBP12.12□□□□□ -0.47
PCNX4-213ENST00000556907 RBMY1EA6NEQ0 496 aaKnown RBP12.12□□□□□ -0.47
PCNX4-213ENST00000556907 PRAC2D3DTV9 90 aa12.12□□□□□ -0.47
PCNX4-213ENST00000556907 RBMY1DP0C7P1 496 aaKnown RBP12.12□□□□□ -0.47
PCNX4-213ENST00000556907 FLI1Q01543 452 aaPredicted RBP12.12□□□□□ -0.47
PCNX4-213ENST00000556907 STHQ8IWL8 128 aa12.12□□□□□ -0.47
PCNX4-213ENST00000556907 SMIM12Q96EX1 92 aa12.12□□□□□ -0.47
PCNX4-213ENST00000556907 TRAV8-1A0A0A6YYK1 113 aa12.11□□□□□ -0.47
PCNX4-213ENST00000556907 TRAV34A0A0B4J273 112 aa12.11□□□□□ -0.47
PCNX4-213ENST00000556907 NPIPB6E9PJ23 425 aa12.11□□□□□ -0.47
PCNX4-213ENST00000556907 UBE2CO00762 179 aa12.11□□□□□ -0.47
PCNX4-213ENST00000556907 LTAP01374 205 aa12.11□□□□□ -0.47
PCNX4-213ENST00000556907 GNG4P50150 75 aa12.11□□□□□ -0.47
PCNX4-213ENST00000556907 PNRC1Q12796 327 aaPredicted RBP12.11□□□□□ -0.47
PCNX4-213ENST00000556907 FOXI2Q6ZQN5 318 aa12.11□□□□□ -0.47
PCNX4-213ENST00000556907 C9orf47Q6ZRZ4 202 aa12.11□□□□□ -0.47
PCNX4-213ENST00000556907 LINC00479Q96M42 142 aa12.11□□□□□ -0.47
PCNX4-213ENST00000556907 SDF2L1Q9HCN8 221 aa12.11□□□□□ -0.47
PCNX4-213ENST00000556907 TMEM241Q24JQ0 296 aa12.1□□□□□ -0.47
PCNX4-213ENST00000556907 EBLN2Q6P2I7 272 aa12.1□□□□□ -0.47
PCNX4-213ENST00000556907 OR8A1Q8NGG7 326 aa12.1□□□□□ -0.47
PCNX4-213ENST00000556907 OR10J6PQ8NGY7 276 aa12.1□□□□□ -0.47
PCNX4-213ENST00000556907 CLUHP3Q96NS8 147 aa12.1□□□□□ -0.47
PCNX4-213ENST00000556907 PSG8Q9UQ74 426 aa12.1□□□□□ -0.47
PCNX4-213ENST00000556907 IGLV2-8P01709 118 aa12.09□□□□□ -0.47
PCNX4-213ENST00000556907 APOC3P02656 99 aa12.09□□□□□ -0.47
PCNX4-213ENST00000556907 MORN3Q6PF18 240 aaPredicted RBP12.09□□□□□ -0.47
PCNX4-213ENST00000556907 LINC01551Q86U37 167 aa12.09□□□□□ -0.47
PCNX4-213ENST00000556907 SBSPONQ8IVN8 264 aa12.09□□□□□ -0.47
PCNX4-213ENST00000556907 SVBPQ8N300 66 aa12.09□□□□□ -0.47
PCNX4-213ENST00000556907 TVP23CQ96ET8 276 aa12.09□□□□□ -0.47
PCNX4-213ENST00000556907 VGLL1Q99990 258 aa12.09□□□□□ -0.47
PCNX4-213ENST00000556907 SAV1Q9H4B6 383 aaPredicted RBP12.09□□□□□ -0.47
PCNX4-213ENST00000556907 ZMAT4Q9H898 229 aa12.09□□□□□ -0.47
PCNX4-213ENST00000556907 PPP1R14DQ9NXH3 145 aa12.09□□□□□ -0.47
PCNX4-213ENST00000556907 PRKDCP78527 4128 aaKnown RBP12.09□□□□□ -0.47
PCNX4-213ENST00000556907 A0A0J9YX75 114 aa12.08□□□□□ -0.48
PCNX4-213ENST00000556907 HLA-DRB4P13762 266 aa12.08□□□□□ -0.48
PCNX4-213ENST00000556907 NUTF2P61970 127 aaKnown RBP12.08□□□□□ -0.48
PCNX4-213ENST00000556907 RPL23P62829 140 aaKnown RBP12.08□□□□□ -0.48
PCNX4-213ENST00000556907 ZNF124Q15973 351 aa12.08□□□□□ -0.48
PCNX4-213ENST00000556907 ACTL10Q5JWF8 245 aa12.08□□□□□ -0.48
PCNX4-213ENST00000556907 TMEM78Q5T7P6 136 aa12.08□□□□□ -0.48
PCNX4-213ENST00000556907 PRNTQ86SH4 94 aa12.08□□□□□ -0.48
PCNX4-213ENST00000556907 TRPT1Q86TN4 253 aaKnown RBP12.08□□□□□ -0.48
PCNX4-213ENST00000556907 SGK494Q96LW2 274 aa12.08□□□□□ -0.48
PCNX4-213ENST00000556907 SPATA25Q9BR10 227 aa12.08□□□□□ -0.48
PCNX4-213ENST00000556907 TM2D3Q9BRN9 247 aa12.08□□□□□ -0.48
PCNX4-213ENST00000556907 MLST8Q9BVC4 326 aa12.08□□□□□ -0.48
PCNX4-213ENST00000556907 CSTL1Q9H114 145 aa12.08□□□□□ -0.48
PCNX4-213ENST00000556907 ZFP30Q9Y2G7 519 aa12.08□□□□□ -0.48
PCNX4-213ENST00000556907 LENEPQ9Y5L5 61 aa12.08□□□□□ -0.48
PCNX4-213ENST00000556907 HLA-DRB4X5D2U9 266 aa12.08□□□□□ -0.48
PCNX4-213ENST00000556907 PGPEP1LA6NFU8 196 aa12.07□□□□□ -0.48
PCNX4-213ENST00000556907 A8MTW9 85 aa12.07□□□□□ -0.48
PCNX4-213ENST00000556907 H3BMM0 161 aa12.07□□□□□ -0.48
PCNX4-213ENST00000556907 DUSP14O95147 198 aaKnown RBP12.07□□□□□ -0.48
PCNX4-213ENST00000556907 PRB4P10163 310 aaPredicted RBP12.07□□□□□ -0.48
PCNX4-213ENST00000556907 HIST1H1AQ02539 215 aaPredicted RBP12.07□□□□□ -0.48
PCNX4-213ENST00000556907 ERCC8Q13216 396 aa12.07□□□□□ -0.48
PCNX4-213ENST00000556907 Q6ZWC4 215 aa12.07□□□□□ -0.48
PCNX4-213ENST00000556907 COX8CQ7Z4L0 72 aa12.07□□□□□ -0.48
PCNX4-213ENST00000556907 BAGE2Q86Y30 109 aa12.07□□□□□ -0.48
PCNX4-213ENST00000556907 TMEM183AQ8IXX5 376 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms