RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 RBMY1EA6NEQ0 496 aaKnown RBP13.64□□□□□ -0.23
PTPN21-208ENST00000556564 RBMY1DP0C7P1 496 aaKnown RBP13.64□□□□□ -0.23
PTPN21-208ENST00000556564 RBMY1A1P0DJD3 496 aaKnown RBP13.64□□□□□ -0.23
PTPN21-208ENST00000556564 RBMY1CP0DJD4 496 aa13.64□□□□□ -0.23
PTPN21-208ENST00000556564 HLA-DMBP28068 263 aa13.64□□□□□ -0.23
PTPN21-208ENST00000556564 CYYR1Q96J86 154 aa13.64□□□□□ -0.23
PTPN21-208ENST00000556564 SIRPDQ9H106 197 aa13.64□□□□□ -0.23
PTPN21-208ENST00000556564 SMPXQ9UHP9 88 aa13.64□□□□□ -0.23
PTPN21-208ENST00000556564 Q8N9W7 124 aa13.64□□□□□ -0.23
PTPN21-208ENST00000556564 TEX43Q6ZNM6 134 aa13.63□□□□□ -0.23
PTPN21-208ENST00000556564 GOLGB1Q14789 3259 aaKnown RBP13.63□□□□□ -0.23
PTPN21-208ENST00000556564 C17orf77Q96MU5 243 aa13.63□□□□□ -0.23
PTPN21-208ENST00000556564 TRAV13-1A0A0B4J241 112 aa13.63□□□□□ -0.23
PTPN21-208ENST00000556564 GP9P14770 177 aa13.63□□□□□ -0.23
PTPN21-208ENST00000556564 POU2AF1Q16633 256 aa13.63□□□□□ -0.23
PTPN21-208ENST00000556564 MRPL16Q9NX20 251 aaKnown RBP13.63□□□□□ -0.23
PTPN21-208ENST00000556564 NUP210LQ5VU65 1888 aa13.63□□□□□ -0.23
PTPN21-208ENST00000556564 IGHV4OR15-8A0A075B7B6 117 aa13.63□□□□□ -0.23
PTPN21-208ENST00000556564 A0A087WW49 117 aa13.63□□□□□ -0.23
PTPN21-208ENST00000556564 DNAJC9-AS1A6NH13 148 aa13.63□□□□□ -0.23
PTPN21-208ENST00000556564 APOMO95445 188 aa13.63□□□□□ -0.23
PTPN21-208ENST00000556564 IGKCP01834 107 aa13.63□□□□□ -0.23
PTPN21-208ENST00000556564 CHCHD1Q96BP2 118 aaKnown RBP13.63□□□□□ -0.23
PTPN21-208ENST00000556564 AJUBAQ96IF1 538 aa13.63□□□□□ -0.23
PTPN21-208ENST00000556564 NPC2P61916 151 aa13.63□□□□□ -0.23
PTPN21-208ENST00000556564 PET117Q6UWS5 81 aa13.63□□□□□ -0.23
PTPN21-208ENST00000556564 ZNF491Q8N8L2 437 aa13.63□□□□□ -0.23
PTPN21-208ENST00000556564 A0A1B0GUS0 222 aa13.62□□□□□ -0.23
PTPN21-208ENST00000556564 DMRTA1Q5VZB9 504 aa13.62□□□□□ -0.23
PTPN21-208ENST00000556564 LRRC75A-AS1Q8N1F1 130 aa13.62□□□□□ -0.23
PTPN21-208ENST00000556564 LOXL1Q08397 574 aaPredicted RBP13.62□□□□□ -0.23
PTPN21-208ENST00000556564 TMEM213A2RRL7 107 aa13.62□□□□□ -0.23
PTPN21-208ENST00000556564 SMIM13P0DJ93 91 aa13.62□□□□□ -0.23
PTPN21-208ENST00000556564 IGHV4-31P0DP07 118 aa13.62□□□□□ -0.23
PTPN21-208ENST00000556564 Q6ZSR3 168 aa13.62□□□□□ -0.23
PTPN21-208ENST00000556564 FNDC4Q9H6D8 234 aaPredicted RBP13.62□□□□□ -0.23
PTPN21-208ENST00000556564 DOCK10Q96BY6 2186 aa13.62□□□□□ -0.23
PTPN21-208ENST00000556564 TRAV2A0A0B4J234 112 aa13.62□□□□□ -0.23
PTPN21-208ENST00000556564 INAFM1C9JVW0 142 aa13.62□□□□□ -0.23
PTPN21-208ENST00000556564 IFI27L1Q96BM0 104 aa13.62□□□□□ -0.23
PTPN21-208ENST00000556564 CADP27708 2225 aa13.61□□□□□ -0.23
PTPN21-208ENST00000556564 LBHQ53QV2 105 aaPredicted RBP13.61□□□□□ -0.23
PTPN21-208ENST00000556564 LY96Q9Y6Y9 160 aa13.61□□□□□ -0.23
PTPN21-208ENST00000556564 GAGE10A6NGK3 116 aa13.61□□□□□ -0.23
PTPN21-208ENST00000556564 TMEM14CQ9P0S9 112 aa13.61□□□□□ -0.23
PTPN21-208ENST00000556564 ASPHD1Q5U4P2 390 aa13.61□□□□□ -0.23
PTPN21-208ENST00000556564 TRPT1Q86TN4 253 aaKnown RBP13.6□□□□□ -0.23
PTPN21-208ENST00000556564 TMEM158Q8WZ71 300 aa13.6□□□□□ -0.23
PTPN21-208ENST00000556564 IGHV3-38A0A0C4DH36 116 aa13.6□□□□□ -0.23
PTPN21-208ENST00000556564 PLA2G2AP14555 144 aa13.6□□□□□ -0.23
PTPN21-208ENST00000556564 ZNF726P1Q15940 193 aa13.6□□□□□ -0.23
PTPN21-208ENST00000556564 FAM90A2PQ658T7 463 aa13.6□□□□□ -0.23
PTPN21-208ENST00000556564 IGF2BP2-AS1Q96M15 143 aa13.59□□□□□ -0.23
PTPN21-208ENST00000556564 OR2K2Q8NGT1 345 aa13.59□□□□□ -0.23
PTPN21-208ENST00000556564 SS18Q15532 418 aa13.59□□□□□ -0.23
PTPN21-208ENST00000556564 FOXI2Q6ZQN5 318 aa13.59□□□□□ -0.23
PTPN21-208ENST00000556564 GGTLC3B5MD39 225 aa13.59□□□□□ -0.23
PTPN21-208ENST00000556564 CITED2Q99967 270 aaPredicted RBP13.59□□□□□ -0.23
PTPN21-208ENST00000556564 NOP10Q9NPE3 64 aaKnown RBP13.58□□□□□ -0.24
PTPN21-208ENST00000556564 SPTAN1Q13813 2472 aaKnown RBP13.58□□□□□ -0.24
PTPN21-208ENST00000556564 KMT2EQ8IZD2 1858 aa13.58□□□□□ -0.24
PTPN21-208ENST00000556564 CTAG1AP78358 180 aa13.58□□□□□ -0.24
PTPN21-208ENST00000556564 FXYD5Q96DB9 178 aa13.58□□□□□ -0.24
PTPN21-208ENST00000556564 PRR25Q96S07 402 aa13.58□□□□□ -0.24
PTPN21-208ENST00000556564 TMEM242Q9NWH2 141 aa13.58□□□□□ -0.24
PTPN21-208ENST00000556564 ZNF815PA8K554 130 aa13.58□□□□□ -0.24
PTPN21-208ENST00000556564 CLPSL1A2RUU4 121 aa13.57□□□□□ -0.24
PTPN21-208ENST00000556564 A0A0J9YY99 117 aa13.57□□□□□ -0.24
PTPN21-208ENST00000556564 TRAV26-2A0A0B4J265 109 aa13.57□□□□□ -0.24
PTPN21-208ENST00000556564 RASL11AQ6T310 242 aa13.57□□□□□ -0.24
PTPN21-208ENST00000556564 ZNRF2Q8NHG8 242 aa13.57□□□□□ -0.24
PTPN21-208ENST00000556564 LMO4P61968 165 aa13.57□□□□□ -0.24
PTPN21-208ENST00000556564 ATP6V0BQ99437 205 aa13.57□□□□□ -0.24
PTPN21-208ENST00000556564 HIST1H2BKO60814 126 aa13.56□□□□□ -0.24
PTPN21-208ENST00000556564 HIST1H2BJP06899 126 aa13.56□□□□□ -0.24
PTPN21-208ENST00000556564 HIST1H2BOP23527 126 aa13.56□□□□□ -0.24
PTPN21-208ENST00000556564 HIST1H2BBP33778 126 aa13.56□□□□□ -0.24
PTPN21-208ENST00000556564 HIST1H2BDP58876 126 aa13.56□□□□□ -0.24
PTPN21-208ENST00000556564 HIST1H2BCP62807 126 aa13.56□□□□□ -0.24
PTPN21-208ENST00000556564 HIST2H2BEQ16778 126 aa13.56□□□□□ -0.24
PTPN21-208ENST00000556564 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.56□□□□□ -0.24
PTPN21-208ENST00000556564 HIST1H2BHQ93079 126 aa13.56□□□□□ -0.24
PTPN21-208ENST00000556564 HIST1H2BNQ99877 126 aa13.56□□□□□ -0.24
PTPN21-208ENST00000556564 HIST1H2BMQ99879 126 aa13.56□□□□□ -0.24
PTPN21-208ENST00000556564 TRBV25-1A0A075B6N4 114 aa13.56□□□□□ -0.24
PTPN21-208ENST00000556564 A8MWV9 139 aa13.56□□□□□ -0.24
PTPN21-208ENST00000556564 I3L2K1 104 aa13.56□□□□□ -0.24
PTPN21-208ENST00000556564 RHODO00212 210 aa13.56□□□□□ -0.24
PTPN21-208ENST00000556564 IGLV2-23P01705 113 aa13.56□□□□□ -0.24
PTPN21-208ENST00000556564 BDP1A6H8Y1 2624 aa13.56□□□□□ -0.24
PTPN21-208ENST00000556564 IGLV11-55A0A075B6I3 123 aa13.55□□□□□ -0.24
PTPN21-208ENST00000556564 DDTP30046 118 aa13.55□□□□□ -0.24
PTPN21-208ENST00000556564 MALRD1Q5VYJ5 2156 aa13.55□□□□□ -0.24
PTPN21-208ENST00000556564 S100A7L2Q5SY68 101 aa13.55□□□□□ -0.24
PTPN21-208ENST00000556564 GFRA4Q9GZZ7 299 aa13.55□□□□□ -0.24
PTPN21-208ENST00000556564 C6orf226Q5I0X4 101 aa13.55□□□□□ -0.24
PTPN21-208ENST00000556564 ZNF492Q9P255 531 aa13.55□□□□□ -0.24
PTPN21-208ENST00000556564 TNFRSF6BO95407 300 aa13.54□□□□□ -0.24
PTPN21-208ENST00000556564 GAGE6Q13070 117 aa13.54□□□□□ -0.24
PTPN21-208ENST00000556564 ODF3L1Q8IXM7 274 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms