RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.67□□□□□ -0.38
RBFOX1-212ENST00000550418 F8VRH5 84 aa12.67□□□□□ -0.38
RBFOX1-212ENST00000550418 SRD5A1P18405 259 aa12.67□□□□□ -0.38
RBFOX1-212ENST00000550418 PRR25Q96S07 402 aa12.67□□□□□ -0.38
RBFOX1-212ENST00000550418 IFITM1P13164 125 aa12.67□□□□□ -0.38
RBFOX1-212ENST00000550418 NEGR1Q7Z3B1 354 aa12.67□□□□□ -0.38
RBFOX1-212ENST00000550418 LINC00527Q9UJ94 153 aa12.67□□□□□ -0.38
RBFOX1-212ENST00000550418 SPXQ9BT56 116 aa12.67□□□□□ -0.38
RBFOX1-212ENST00000550418 NDPQ00604 133 aa12.66□□□□□ -0.38
RBFOX1-212ENST00000550418 TMEM14CQ9P0S9 112 aa12.66□□□□□ -0.38
RBFOX1-212ENST00000550418 ZNF134P52741 427 aa12.66□□□□□ -0.38
RBFOX1-212ENST00000550418 MDS2Q8NDY4 140 aa12.66□□□□□ -0.38
RBFOX1-212ENST00000550418 OR11H6Q8NGC7 330 aa12.66□□□□□ -0.38
RBFOX1-212ENST00000550418 C11orf68Q9H3H3 251 aaKnown RBP12.66□□□□□ -0.38
RBFOX1-212ENST00000550418 PROK2Q9HC23 129 aa12.66□□□□□ -0.38
RBFOX1-212ENST00000550418 PTPRQQ9UMZ3 2332 aa12.66□□□□□ -0.38
RBFOX1-212ENST00000550418 TAX1BP3O14907 124 aa12.66□□□□□ -0.38
RBFOX1-212ENST00000550418 CRPP02741 224 aa12.66□□□□□ -0.38
RBFOX1-212ENST00000550418 ZNF688P0C7X2 276 aa12.66□□□□□ -0.38
RBFOX1-212ENST00000550418 PLXNA2O75051 1894 aa12.66□□□□□ -0.38
RBFOX1-212ENST00000550418 LINC00158P58513 81 aa12.66□□□□□ -0.38
RBFOX1-212ENST00000550418 SPG11Q96JI7 2443 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 TRGV2A0A075B6R0 118 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 GHRHP01286 108 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 NBL1P41271 181 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 TCF15Q12870 199 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 Q6ZR03 302 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 PRO1854Q9UHT4 67 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 TP53TG1Q9Y2A0 90 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 TRAV41A0A0B4J266 112 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 ZNF503-AS2A6NEH8 195 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 GAGE12JA6NER3 117 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 OOSP1A8MZH6 123 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 GAGE7O76087 117 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 GAGE12FP0CL80 117 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 GAGE12GP0CL81 117 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 GAGE12IP0CL82 117 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 GAGE4Q13068 117 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 LINC00173Q6ZV60 143 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 LY6G5BQ8NDX9 201 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 C1QTNF4Q9BXJ3 329 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 LTAP01374 205 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 C17orf58Q2M2W7 97 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 CFAP161Q6P656 301 aa12.65□□□□□ -0.38
RBFOX1-212ENST00000550418 FGF6P10767 208 aa12.65□□□□□ -0.39
RBFOX1-212ENST00000550418 HLA-DRB4P13762 266 aa12.65□□□□□ -0.39
RBFOX1-212ENST00000550418 TMEM86BQ8N661 226 aa12.65□□□□□ -0.39
RBFOX1-212ENST00000550418 HLA-DRB4X5D2U9 266 aa12.65□□□□□ -0.39
RBFOX1-212ENST00000550418 ACACBO00763 2458 aa12.65□□□□□ -0.39
RBFOX1-212ENST00000550418 POU2AF1Q16633 256 aa12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 ZNF672Q499Z4 452 aaPredicted RBP12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 GATD1Q8NB37 220 aa12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 IGLC1P0CG04 106 aa12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 LINC01545Q5VT33 79 aa12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 CCL19Q99731 98 aa12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 A0A087WWL8 130 aa12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 SLC25A20O43772 301 aa12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 PMVKQ15126 192 aa12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 ANKRD39Q53RE8 183 aa12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 LYPD2Q6UXB3 125 aa12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 ZNF833PQ6ZTB9 187 aa12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 SH2D6Q7Z4S9 175 aa12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 CITED1Q99966 193 aa12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 KLRD1Q13241 179 aa12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 GAGE2AQ6NT46 116 aa12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 VMO1Q7Z5L0 202 aa12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 SCRT2Q9NQ03 307 aa12.64□□□□□ -0.39
RBFOX1-212ENST00000550418 FAM120AOSQ5T036 256 aa12.63□□□□□ -0.39
RBFOX1-212ENST00000550418 THAP8Q8NA92 274 aa12.63□□□□□ -0.39
RBFOX1-212ENST00000550418 RASL10AQ92737 203 aa12.63□□□□□ -0.39
RBFOX1-212ENST00000550418 GAGE5Q13069 117 aa12.63□□□□□ -0.39
RBFOX1-212ENST00000550418 GAGE6Q13070 117 aa12.63□□□□□ -0.39
RBFOX1-212ENST00000550418 DTX2Q86UW9 622 aa12.62□□□□□ -0.39
RBFOX1-212ENST00000550418 PRSS33Q8NF86 280 aa12.62□□□□□ -0.39
RBFOX1-212ENST00000550418 TRBV7-1A0A0A6YYK4 115 aa12.62□□□□□ -0.39
RBFOX1-212ENST00000550418 B5MCH6 92 aa12.62□□□□□ -0.39
RBFOX1-212ENST00000550418 EFNA4P52798 201 aa12.62□□□□□ -0.39
RBFOX1-212ENST00000550418 C7orf69Q9H7B7 122 aa12.62□□□□□ -0.39
RBFOX1-212ENST00000550418 ADARB2-AS1A8MUL3 147 aa12.62□□□□□ -0.39
RBFOX1-212ENST00000550418 S100A7L2Q5SY68 101 aa12.62□□□□□ -0.39
RBFOX1-212ENST00000550418 MINOS1Q5TGZ0 78 aa12.62□□□□□ -0.39
RBFOX1-212ENST00000550418 TMEM141Q96I45 108 aa12.62□□□□□ -0.39
RBFOX1-212ENST00000550418 SMIM2Q9BVW6 85 aa12.62□□□□□ -0.39
RBFOX1-212ENST00000550418 MINOS1-NBL1R4GNA1 71 aa12.62□□□□□ -0.39
RBFOX1-212ENST00000550418 TECTAO75443 2155 aa12.61□□□□□ -0.39
RBFOX1-212ENST00000550418 TRBV25-1A0A075B6N4 114 aa12.61□□□□□ -0.39
RBFOX1-212ENST00000550418 IGHV3-73A0A0B4J1V6 119 aa12.61□□□□□ -0.39
RBFOX1-212ENST00000550418 PAX4O43316 350 aa12.61□□□□□ -0.39
RBFOX1-212ENST00000550418 Q6ZSR3 168 aa12.61□□□□□ -0.39
RBFOX1-212ENST00000550418 IL17RELQ6ZVW7 336 aa12.61□□□□□ -0.39
RBFOX1-212ENST00000550418 TRAV26-2A0A0B4J265 109 aa12.61□□□□□ -0.39
RBFOX1-212ENST00000550418 KIF26AQ9ULI4 1882 aaPredicted RBP12.61□□□□□ -0.39
RBFOX1-212ENST00000550418 K7EM74 188 aa12.61□□□□□ -0.39
RBFOX1-212ENST00000550418 LY6G6EA0A0G2JKS1 128 aa12.6□□□□□ -0.39
RBFOX1-212ENST00000550418 H3BRN7 92 aa12.6□□□□□ -0.39
RBFOX1-212ENST00000550418 FCN3O75636 299 aa12.6□□□□□ -0.39
RBFOX1-212ENST00000550418 NDUFB8O95169 186 aa12.6□□□□□ -0.39
RBFOX1-212ENST00000550418 THBDP07204 575 aa12.6□□□□□ -0.39
RBFOX1-212ENST00000550418 U3KQA8 63 aa12.6□□□□□ -0.39
RBFOX1-212ENST00000550418 ARHGAP21Q5T5U3 1957 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms