RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 SAMD5Q5TGI4 173 aa10.72□□□□□ -0.69
HDAC7-228ENST00000548938 WFDC12Q8WWY7 111 aa10.72□□□□□ -0.69
HDAC7-228ENST00000548938 PRR25Q96S07 402 aa10.72□□□□□ -0.69
HDAC7-228ENST00000548938 ATRXP46100 2492 aa10.72□□□□□ -0.69
HDAC7-228ENST00000548938 NPIPB5A8MRT5 1133 aa10.71□□□□□ -0.69
HDAC7-228ENST00000548938 GNG7O60262 68 aa10.71□□□□□ -0.69
HDAC7-228ENST00000548938 IGFL4Q6B9Z1 124 aa10.71□□□□□ -0.69
HDAC7-228ENST00000548938 RALYQ9UKM9 306 aaKnown RBP10.71□□□□□ -0.69
HDAC7-228ENST00000548938 LYNX1G3V0Z9 82 aa10.71□□□□□ -0.69
HDAC7-228ENST00000548938 TIMM23O14925 209 aa10.71□□□□□ -0.69
HDAC7-228ENST00000548938 IGLC6P0CF74 106 aa10.71□□□□□ -0.69
HDAC7-228ENST00000548938 SMIM13P0DJ93 91 aa10.71□□□□□ -0.69
HDAC7-228ENST00000548938 LYNX1P0DP58 116 aa10.71□□□□□ -0.69
HDAC7-228ENST00000548938 ODF1Q14990 250 aa10.71□□□□□ -0.69
HDAC7-228ENST00000548938 RNF185Q96GF1 192 aa10.71□□□□□ -0.69
HDAC7-228ENST00000548938 POLEQ07864 2286 aa10.71□□□□□ -0.7
HDAC7-228ENST00000548938 LEPP41159 167 aa10.71□□□□□ -0.7
HDAC7-228ENST00000548938 ZNF575Q86XF7 245 aa10.71□□□□□ -0.7
HDAC7-228ENST00000548938 VGLL1Q99990 258 aa10.71□□□□□ -0.7
HDAC7-228ENST00000548938 MAP1LC3AQ9H492 121 aa10.71□□□□□ -0.7
HDAC7-228ENST00000548938 EVI2AP22794 236 aa10.7□□□□□ -0.7
HDAC7-228ENST00000548938 HLA-DMBP28068 263 aa10.7□□□□□ -0.7
HDAC7-228ENST00000548938 UCNP55089 124 aa10.7□□□□□ -0.7
HDAC7-228ENST00000548938 SRSF8Q9BRL6 282 aaKnown RBP10.7□□□□□ -0.7
HDAC7-228ENST00000548938 CHAC1Q9BUX1 264 aa10.7□□□□□ -0.7
HDAC7-228ENST00000548938 HHLA3Q9XRX5 114 aa10.7□□□□□ -0.7
HDAC7-228ENST00000548938 RPL24P83731 157 aaKnown RBP10.7□□□□□ -0.7
HDAC7-228ENST00000548938 NBASA2RRP1 2371 aa10.69□□□□□ -0.7
HDAC7-228ENST00000548938 TEX48A0A1B0GUV7 120 aa10.69□□□□□ -0.7
HDAC7-228ENST00000548938 K7EMI3 77 aa10.69□□□□□ -0.7
HDAC7-228ENST00000548938 ZNF562Q6V9R5 426 aa10.69□□□□□ -0.7
HDAC7-228ENST00000548938 COX8CQ7Z4L0 72 aa10.69□□□□□ -0.7
HDAC7-228ENST00000548938 RAB1BQ9H0U4 201 aa10.69□□□□□ -0.7
HDAC7-228ENST00000548938 FBLL1A6NHQ2 334 aaKnown RBP10.69□□□□□ -0.7
HDAC7-228ENST00000548938 E7EQL1 145 aa10.69□□□□□ -0.7
HDAC7-228ENST00000548938 IGHV3-23P01764 117 aa10.69□□□□□ -0.7
HDAC7-228ENST00000548938 GATA1P15976 413 aaPredicted RBP10.69□□□□□ -0.7
HDAC7-228ENST00000548938 ZMAT4Q9H898 229 aa10.69□□□□□ -0.7
HDAC7-228ENST00000548938 PPIAL4CA0A0B4J2A2 164 aa10.68□□□□□ -0.7
HDAC7-228ENST00000548938 F8W735 103 aaPredicted RBP10.68□□□□□ -0.7
HDAC7-228ENST00000548938 LY6LH3BQJ8 138 aa10.68□□□□□ -0.7
HDAC7-228ENST00000548938 PRSS1P07477 247 aa10.68□□□□□ -0.7
HDAC7-228ENST00000548938 PPIAL4GP0DN37 164 aa10.68□□□□□ -0.7
HDAC7-228ENST00000548938 GTSCR1Q86UQ5 136 aa10.68□□□□□ -0.7
HDAC7-228ENST00000548938 PIFOQ8TCI5 191 aa10.68□□□□□ -0.7
HDAC7-228ENST00000548938 ORM1P02763 201 aa10.68□□□□□ -0.7
HDAC7-228ENST00000548938 SMIM17P0DL12 118 aa10.68□□□□□ -0.7
HDAC7-228ENST00000548938 FCER1GP30273 86 aa10.68□□□□□ -0.7
HDAC7-228ENST00000548938 CEACAM3P40198 252 aa10.68□□□□□ -0.7
HDAC7-228ENST00000548938 FANCD2OSQ96PS1 177 aa10.68□□□□□ -0.7
HDAC7-228ENST00000548938 HIGD1BQ9P298 99 aa10.68□□□□□ -0.7
HDAC7-228ENST00000548938 DCHS2Q6V1P9 2916 aa10.67□□□□□ -0.7
HDAC7-228ENST00000548938 TRBV25-1A0A075B6N4 114 aa10.67□□□□□ -0.7
HDAC7-228ENST00000548938 SHISA9B4DS77 424 aa10.67□□□□□ -0.7
HDAC7-228ENST00000548938 NBR2O15453 112 aa10.67□□□□□ -0.7
HDAC7-228ENST00000548938 TNFRSF6BO95407 300 aa10.67□□□□□ -0.7
HDAC7-228ENST00000548938 PHLDA1Q8WV24 401 aaPredicted RBP10.67□□□□□ -0.7
HDAC7-228ENST00000548938 RNF5Q99942 180 aa10.67□□□□□ -0.7
HDAC7-228ENST00000548938 FOXC2Q99958 501 aa10.67□□□□□ -0.7
HDAC7-228ENST00000548938 NHP2Q9NX24 153 aaKnown RBP10.67□□□□□ -0.7
HDAC7-228ENST00000548938 IGKCP01834 107 aa10.67□□□□□ -0.7
HDAC7-228ENST00000548938 IGHG4P01861 327 aa10.67□□□□□ -0.7
HDAC7-228ENST00000548938 PPIFP30405 207 aaKnown RBP10.67□□□□□ -0.7
HDAC7-228ENST00000548938 Q5PR19 223 aa10.67□□□□□ -0.7
HDAC7-228ENST00000548938 PSMG3-AS1Q96PY0 264 aa10.67□□□□□ -0.7
HDAC7-228ENST00000548938 IGHV3OR16-8A0A075B7F1 116 aa10.66□□□□□ -0.7
HDAC7-228ENST00000548938 LINC01546A6NGU7 62 aa10.66□□□□□ -0.7
HDAC7-228ENST00000548938 MFAP4P55083 255 aa10.66□□□□□ -0.7
HDAC7-228ENST00000548938 ONECUT1Q9UBC0 465 aa10.66□□□□□ -0.7
HDAC7-228ENST00000548938 LRBAP50851 2863 aa10.66□□□□□ -0.7
HDAC7-228ENST00000548938 IGLV11-55A0A075B6I3 123 aa10.66□□□□□ -0.7
HDAC7-228ENST00000548938 VSTM5A8MXK1 200 aa10.66□□□□□ -0.7
HDAC7-228ENST00000548938 GOSR1O95249 250 aa10.66□□□□□ -0.7
HDAC7-228ENST00000548938 RPL7P18124 248 aaKnown RBP10.66□□□□□ -0.7
HDAC7-228ENST00000548938 ZC2HC1BQ5TFG8 222 aa10.66□□□□□ -0.7
HDAC7-228ENST00000548938 S100A7AQ86SG5 101 aa10.66□□□□□ -0.7
HDAC7-228ENST00000548938 TMEM158Q8WZ71 300 aa10.66□□□□□ -0.7
HDAC7-228ENST00000548938 SMAD5-AS1Q9Y6J3 95 aa10.66□□□□□ -0.7
HDAC7-228ENST00000548938 ERCC8Q13216 396 aa10.65□□□□□ -0.7
HDAC7-228ENST00000548938 CNFNQ9BYD5 112 aa10.65□□□□□ -0.7
HDAC7-228ENST00000548938 NXT2Q9NPJ8 142 aaKnown RBP10.65□□□□□ -0.7
HDAC7-228ENST00000548938 TMEM8BA6NDV4 472 aa10.64□□□□□ -0.71
HDAC7-228ENST00000548938 NDPQ00604 133 aa10.64□□□□□ -0.71
HDAC7-228ENST00000548938 SAMD13Q5VXD3 122 aa10.64□□□□□ -0.71
HDAC7-228ENST00000548938 C21orf62Q9NYP8 219 aa10.64□□□□□ -0.71
HDAC7-228ENST00000548938 DPM2O94777 84 aa10.64□□□□□ -0.71
HDAC7-228ENST00000548938 CEND1Q8N111 149 aa10.64□□□□□ -0.71
HDAC7-228ENST00000548938 CFHR4Q92496 578 aa10.64□□□□□ -0.71
HDAC7-228ENST00000548938 VKORC1Q9BQB6 163 aa10.64□□□□□ -0.71
HDAC7-228ENST00000548938 IGHV3-35A0A0C4DH35 117 aa10.64□□□□□ -0.71
HDAC7-228ENST00000548938 HES1Q14469 280 aa10.64□□□□□ -0.71
HDAC7-228ENST00000548938 DYNAPQ8N1N2 210 aa10.64□□□□□ -0.71
HDAC7-228ENST00000548938 TMEM160Q9NX00 188 aa10.64□□□□□ -0.71
HDAC7-228ENST00000548938 PRAC2D3DTV9 90 aa10.63□□□□□ -0.71
HDAC7-228ENST00000548938 ZNF207O43670 478 aaKnown RBP10.63□□□□□ -0.71
HDAC7-228ENST00000548938 NDUFA3O95167 84 aa10.63□□□□□ -0.71
HDAC7-228ENST00000548938 DTX2Q86UW9 622 aa10.63□□□□□ -0.71
HDAC7-228ENST00000548938 TM2D2Q9BX73 214 aa10.63□□□□□ -0.71
HDAC7-228ENST00000548938 GTSF1LQ9H1H1 148 aa10.63□□□□□ -0.71
HDAC7-228ENST00000548938 ARHGAP32A7KAX9 2087 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms