RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 MUC21A0A140T8X8 626 aa14.25□□□□□ -0.13
PRPF40B-208ENST00000548436 FAM223BA6NKX1 122 aa14.25□□□□□ -0.13
PRPF40B-208ENST00000548436 TRGV3P03979 118 aa14.25□□□□□ -0.13
PRPF40B-208ENST00000548436 CSN3P07498 182 aa14.25□□□□□ -0.13
PRPF40B-208ENST00000548436 MUC21Q5SSG8 566 aa14.25□□□□□ -0.13
PRPF40B-208ENST00000548436 FAM223AQ8IWN6 122 aa14.25□□□□□ -0.13
PRPF40B-208ENST00000548436 SLC50A1Q9BRV3 221 aa14.25□□□□□ -0.13
PRPF40B-208ENST00000548436 TRAV8-2A0A0B4J237 113 aa14.24□□□□□ -0.13
PRPF40B-208ENST00000548436 BMI1P35226 326 aa14.24□□□□□ -0.13
PRPF40B-208ENST00000548436 UTP20O75691 2785 aaKnown RBP14.24□□□□□ -0.13
PRPF40B-208ENST00000548436 H3BUX3 64 aa14.24□□□□□ -0.13
PRPF40B-208ENST00000548436 MSMBP08118 114 aa14.24□□□□□ -0.13
PRPF40B-208ENST00000548436 ZNF843Q8N446 348 aa14.24□□□□□ -0.13
PRPF40B-208ENST00000548436 PSMG3-AS1Q96PY0 264 aa14.24□□□□□ -0.13
PRPF40B-208ENST00000548436 TMEM70Q9BUB7 260 aa14.24□□□□□ -0.13
PRPF40B-208ENST00000548436 IGF1P05019 195 aa14.23□□□□□ -0.13
PRPF40B-208ENST00000548436 NRGNQ92686 78 aa14.23□□□□□ -0.13
PRPF40B-208ENST00000548436 RBAKDNA6NC62 111 aa14.22□□□□□ -0.13
PRPF40B-208ENST00000548436 A6NDX4 124 aa14.22□□□□□ -0.13
PRPF40B-208ENST00000548436 LEPROTL1O95214 131 aa14.22□□□□□ -0.13
PRPF40B-208ENST00000548436 ATP6V0BQ99437 205 aa14.22□□□□□ -0.13
PRPF40B-208ENST00000548436 TRBV12-3P01733 135 aa14.22□□□□□ -0.13
PRPF40B-208ENST00000548436 IGLC6P0CF74 106 aa14.22□□□□□ -0.13
PRPF40B-208ENST00000548436 IGLC3P0DOY3 106 aa14.22□□□□□ -0.13
PRPF40B-208ENST00000548436 C8orf86Q6ZUL3 223 aa14.22□□□□□ -0.13
PRPF40B-208ENST00000548436 IL17RELQ6ZVW7 336 aa14.22□□□□□ -0.13
PRPF40B-208ENST00000548436 AMN1Q8IY45 258 aa14.22□□□□□ -0.13
PRPF40B-208ENST00000548436 CRXO43186 299 aaPredicted RBP14.21□□□□□ -0.13
PRPF40B-208ENST00000548436 AVPP01185 164 aa14.21□□□□□ -0.13
PRPF40B-208ENST00000548436 IGHG2P01859 326 aa14.21□□□□□ -0.13
PRPF40B-208ENST00000548436 PPIFP30405 207 aaKnown RBP14.21□□□□□ -0.13
PRPF40B-208ENST00000548436 RPS20P60866 119 aaKnown RBP14.21□□□□□ -0.13
PRPF40B-208ENST00000548436 DMRTA1Q5VZB9 504 aa14.21□□□□□ -0.13
PRPF40B-208ENST00000548436 FAM104BQ5XKR9 115 aa14.21□□□□□ -0.13
PRPF40B-208ENST00000548436 FER1L6-AS1Q8NA97 138 aa14.21□□□□□ -0.13
PRPF40B-208ENST00000548436 CHD6Q8TD26 2715 aa14.21□□□□□ -0.13
PRPF40B-208ENST00000548436 FABP5P3A8MUU1 101 aa14.21□□□□□ -0.14
PRPF40B-208ENST00000548436 ORM1P02763 201 aa14.21□□□□□ -0.14
PRPF40B-208ENST00000548436 ARL3P36405 182 aa14.21□□□□□ -0.14
PRPF40B-208ENST00000548436 NUTF2P61970 127 aaKnown RBP14.21□□□□□ -0.14
PRPF40B-208ENST00000548436 SRSF2Q01130 221 aaKnown RBP14.21□□□□□ -0.14
PRPF40B-208ENST00000548436 Q6ZS46 218 aa14.21□□□□□ -0.14
PRPF40B-208ENST00000548436 AGPAT4-IT1Q9H0P7 198 aa14.21□□□□□ -0.14
PRPF40B-208ENST00000548436 D6R8Y8 96 aa14.2□□□□□ -0.14
PRPF40B-208ENST00000548436 SYS1-DBNDD2H3BUS1 97 aa14.2□□□□□ -0.14
PRPF40B-208ENST00000548436 BLCAPP62952 87 aa14.2□□□□□ -0.14
PRPF40B-208ENST00000548436 SPOCK3Q9BQ16 436 aa14.2□□□□□ -0.14
PRPF40B-208ENST00000548436 HIF1ANQ9NWT6 349 aa14.2□□□□□ -0.14
PRPF40B-208ENST00000548436 CSMD2Q7Z408 3487 aa14.2□□□□□ -0.14
PRPF40B-208ENST00000548436 TRAV9-2A0A087WT02 112 aa14.19□□□□□ -0.14
PRPF40B-208ENST00000548436 UNQ9165/PRO28630Q6UXU0 137 aa14.19□□□□□ -0.14
PRPF40B-208ENST00000548436 MRPL52Q86TS9 123 aaKnown RBP14.19□□□□□ -0.14
PRPF40B-208ENST00000548436 UQCR10Q9UDW1 63 aa14.19□□□□□ -0.14
PRPF40B-208ENST00000548436 U3KQK5 164 aa14.19□□□□□ -0.14
PRPF40B-208ENST00000548436 OR5AL1P0C617 328 aa14.19□□□□□ -0.14
PRPF40B-208ENST00000548436 TWIST1Q15672 202 aa14.19□□□□□ -0.14
PRPF40B-208ENST00000548436 GLMPQ8WWB7 406 aa14.19□□□□□ -0.14
PRPF40B-208ENST00000548436 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.19□□□□□ -0.148e-6■■■■□ 21.9
PRPF40B-208ENST00000548436 MRPL51Q4U2R6 128 aaKnown RBP14.18□□□□□ -0.14
PRPF40B-208ENST00000548436 KLK15Q9H2R5 256 aa14.18□□□□□ -0.14
PRPF40B-208ENST00000548436 AP5S1Q9NUS5 200 aa14.18□□□□□ -0.14
PRPF40B-208ENST00000548436 SMAD7O15105 426 aaKnown RBP14.18□□□□□ -0.14
PRPF40B-208ENST00000548436 IFI27P40305 119 aaPredicted RBP14.18□□□□□ -0.14
PRPF40B-208ENST00000548436 KLHDC1Q8N7A1 406 aa14.18□□□□□ -0.14
PRPF40B-208ENST00000548436 PRSS3P2Q8NHM4 247 aa14.18□□□□□ -0.14
PRPF40B-208ENST00000548436 MRPL53Q96EL3 112 aaKnown RBP14.18□□□□□ -0.14
PRPF40B-208ENST00000548436 B4DSR2 109 aa14.17□□□□□ -0.14
PRPF40B-208ENST00000548436 M0QZK8 103 aa14.17□□□□□ -0.14
PRPF40B-208ENST00000548436 IGLL1P15814 213 aa14.17□□□□□ -0.14
PRPF40B-208ENST00000548436 LINC01559Q495D7 138 aa14.17□□□□□ -0.14
PRPF40B-208ENST00000548436 FAM106AQ4KMX7 169 aa14.17□□□□□ -0.14
PRPF40B-208ENST00000548436 PRELID3AQ96N28 172 aa14.17□□□□□ -0.14
PRPF40B-208ENST00000548436 MSRB1Q9NZV6 116 aa14.17□□□□□ -0.14
PRPF40B-208ENST00000548436 OR4C46A6NHA9 309 aa14.16□□□□□ -0.14
PRPF40B-208ENST00000548436 BRI3O95415 125 aa14.16□□□□□ -0.14
PRPF40B-208ENST00000548436 IGHV3-11P01762 117 aa14.16□□□□□ -0.14
PRPF40B-208ENST00000548436 CYB5R2Q6BCY4 276 aa14.16□□□□□ -0.14
PRPF40B-208ENST00000548436 C11orf21Q9P2W6 132 aa14.16□□□□□ -0.14
PRPF40B-208ENST00000548436 TIMM8BQ9Y5J9 83 aaPredicted RBP14.16□□□□□ -0.14
PRPF40B-208ENST00000548436 LOC389332A0A1B0GUA5 103 aa14.16□□□□□ -0.14
PRPF40B-208ENST00000548436 Q6ZN92 141 aa14.16□□□□□ -0.14
PRPF40B-208ENST00000548436 LCNL1Q6ZST4 164 aa14.16□□□□□ -0.14
PRPF40B-208ENST00000548436 FA2HQ7L5A8 372 aa14.16□□□□□ -0.14
PRPF40B-208ENST00000548436 ORMDL3Q8N138 153 aa14.16□□□□□ -0.14
PRPF40B-208ENST00000548436 SIGLEC8Q9NYZ4 499 aa14.16□□□□□ -0.14
PRPF40B-208ENST00000548436 ZNF462Q96JM2 2506 aa14.15□□□□□ -0.14
PRPF40B-208ENST00000548436 IGKV3D-20A0A0C4DH25 116 aa14.15□□□□□ -0.14
PRPF40B-208ENST00000548436 H3BUA1 57 aa14.15□□□□□ -0.14
PRPF40B-208ENST00000548436 NDUFA4O00483 81 aa14.15□□□□□ -0.14
PRPF40B-208ENST00000548436 TMEM78Q5T7P6 136 aa14.15□□□□□ -0.14
PRPF40B-208ENST00000548436 C9orf47Q6ZRZ4 202 aa14.15□□□□□ -0.14
PRPF40B-208ENST00000548436 USMG5Q96IX5 58 aa14.15□□□□□ -0.14
PRPF40B-208ENST00000548436 C16orf92Q96LL3 132 aa14.15□□□□□ -0.14
PRPF40B-208ENST00000548436 C20orf173Q96LM9 149 aa14.15□□□□□ -0.14
PRPF40B-208ENST00000548436 CNFNQ9BYD5 112 aa14.15□□□□□ -0.14
PRPF40B-208ENST00000548436 CSPG4Q6UVK1 2322 aa14.15□□□□□ -0.14
PRPF40B-208ENST00000548436 MYO18BQ8IUG5 2567 aa14.15□□□□□ -0.14
PRPF40B-208ENST00000548436 SMKR1H3BMG3 65 aa14.14□□□□□ -0.15
PRPF40B-208ENST00000548436 PF4V1P10720 104 aa14.14□□□□□ -0.15
PRPF40B-208ENST00000548436 LOXL1Q08397 574 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms