RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 ERCC8Q13216 396 aa14.64□□□□□ -0.07
SKP2-208ENST00000546211 RBPMS2Q6ZRY4 209 aaKnown RBP14.64□□□□□ -0.07
SKP2-208ENST00000546211 ZNF492Q9P255 531 aa14.64□□□□□ -0.07
SKP2-208ENST00000546211 COLCA2A8K830 154 aa14.63□□□□□ -0.07
SKP2-208ENST00000546211 K7EQG2 157 aa14.63□□□□□ -0.07
SKP2-208ENST00000546211 ELOBQ15370 118 aa14.63□□□□□ -0.07
SKP2-208ENST00000546211 KCNIP4Q6PIL6 250 aa14.63□□□□□ -0.07
SKP2-208ENST00000546211 OR10J6PQ8NGY7 276 aa14.63□□□□□ -0.07
SKP2-208ENST00000546211 DAZAP1Q96EP5 407 aaKnown RBP14.63□□□□□ -0.07
SKP2-208ENST00000546211 PRR25Q96S07 402 aa14.63□□□□□ -0.07
SKP2-208ENST00000546211 ASCL2Q99929 193 aa14.63□□□□□ -0.07
SKP2-208ENST00000546211 V9GYV3 84 aa14.63□□□□□ -0.07
SKP2-208ENST00000546211 GATCO43716 136 aaKnown RBP14.62□□□□□ -0.07
SKP2-208ENST00000546211 CT45A10P0DMU9 189 aa14.62□□□□□ -0.07
SKP2-208ENST00000546211 C9orf47Q6ZRZ4 202 aa14.62□□□□□ -0.07
SKP2-208ENST00000546211 Q8TAT8 98 aa14.62□□□□□ -0.07
SKP2-208ENST00000546211 YPEL4Q96NS1 127 aa14.62□□□□□ -0.07
SKP2-208ENST00000546211 IMMP2LQ96T52 175 aa14.62□□□□□ -0.07
SKP2-208ENST00000546211 AGPAT4-IT1Q9H0P7 198 aa14.62□□□□□ -0.07
SKP2-208ENST00000546211 ZNF705GA8MUZ8 300 aaPredicted RBP14.61□□□□□ -0.07
SKP2-208ENST00000546211 ZNF138P52744 262 aa14.61□□□□□ -0.07
SKP2-208ENST00000546211 DEFB114Q30KQ6 69 aa14.61□□□□□ -0.07
SKP2-208ENST00000546211 NUDT10Q8NFP7 164 aa14.61□□□□□ -0.07
SKP2-208ENST00000546211 NUDT11Q96G61 164 aa14.61□□□□□ -0.07
SKP2-208ENST00000546211 ZC2HC1AQ96GY0 325 aa14.61□□□□□ -0.07
SKP2-208ENST00000546211 SIGLEC8Q9NYZ4 499 aa14.61□□□□□ -0.07
SKP2-208ENST00000546211 TRAV2A0A0B4J234 112 aa14.6□□□□□ -0.07
SKP2-208ENST00000546211 PFN1P07737 140 aaKnown RBP14.6□□□□□ -0.07
SKP2-208ENST00000546211 C8orf49Q96NF6 230 aa14.6□□□□□ -0.07
SKP2-208ENST00000546211 IL36BQ9NZH7 164 aa14.6□□□□□ -0.07
SKP2-208ENST00000546211 P01737 135 aa14.6□□□□□ -0.07
SKP2-208ENST00000546211 PF4P02776 101 aa14.6□□□□□ -0.07
SKP2-208ENST00000546211 ZNF688P0C7X2 276 aa14.6□□□□□ -0.07
SKP2-208ENST00000546211 COX8CQ7Z4L0 72 aa14.6□□□□□ -0.07
SKP2-208ENST00000546211 TMEM61Q8N0U2 210 aa14.6□□□□□ -0.07
SKP2-208ENST00000546211 OR8A1Q8NGG7 326 aa14.6□□□□□ -0.07
SKP2-208ENST00000546211 LINC00477Q96M19 166 aa14.6□□□□□ -0.07
SKP2-208ENST00000546211 C19orf71A6NCJ1 209 aa14.59□□□□□ -0.07
SKP2-208ENST00000546211 SMUG1Q53HV7 270 aa14.59□□□□□ -0.07
SKP2-208ENST00000546211 PSMG4Q5JS54 123 aa14.59□□□□□ -0.07
SKP2-208ENST00000546211 LINC00322Q6ZN03 302 aaPredicted RBP14.59□□□□□ -0.07
SKP2-208ENST00000546211 GPR61Q9BZJ8 451 aa14.59□□□□□ -0.07
SKP2-208ENST00000546211 PPP1R14DQ9NXH3 145 aa14.59□□□□□ -0.07
SKP2-208ENST00000546211 TGIF2-C20orf24A0A0A6YYL0 155 aa14.58□□□□□ -0.08
SKP2-208ENST00000546211 TRAV25A0A0B4J276 109 aa14.58□□□□□ -0.08
SKP2-208ENST00000546211 NPIPB6E9PJ23 425 aa14.58□□□□□ -0.08
SKP2-208ENST00000546211 ZNF705DP0CH99 300 aaPredicted RBP14.58□□□□□ -0.08
SKP2-208ENST00000546211 ZNF705BP0CI00 300 aaPredicted RBP14.58□□□□□ -0.08
SKP2-208ENST00000546211 HIST1H1AQ02539 215 aaPredicted RBP14.58□□□□□ -0.08
SKP2-208ENST00000546211 CD300EQ496F6 205 aaPredicted RBP14.58□□□□□ -0.08
SKP2-208ENST00000546211 RPP21Q9H633 154 aaKnown RBP14.58□□□□□ -0.08
SKP2-208ENST00000546211 C2CD3Q4AC94 2353 aa14.58□□□□□ -0.08
SKP2-208ENST00000546211 TRBV24-1A0A075B6N3 115 aa14.57□□□□□ -0.08
SKP2-208ENST00000546211 A0A1W2PPQ1 181 aa14.57□□□□□ -0.08
SKP2-208ENST00000546211 CXCL1P09341 107 aa14.57□□□□□ -0.08
SKP2-208ENST00000546211 FAM3BP58499 235 aaPredicted RBP14.57□□□□□ -0.08
SKP2-208ENST00000546211 CITED1Q99966 193 aa14.57□□□□□ -0.08
SKP2-208ENST00000546211 LENEPQ9Y5L5 61 aa14.57□□□□□ -0.08
SKP2-208ENST00000546211 F6UB75 175 aa14.56□□□□□ -0.08
SKP2-208ENST00000546211 SAP30O75446 220 aa14.56□□□□□ -0.08
SKP2-208ENST00000546211 RAB5AP20339 215 aa14.56□□□□□ -0.08
SKP2-208ENST00000546211 DEFB1P60022 68 aa14.56□□□□□ -0.08
SKP2-208ENST00000546211 FAM162BQ5T6X4 162 aa14.56□□□□□ -0.08
SKP2-208ENST00000546211 OR4B1Q8NGF8 309 aa14.56□□□□□ -0.08
SKP2-208ENST00000546211 BTF3L4Q96K17 158 aa14.56□□□□□ -0.08
SKP2-208ENST00000546211 SPAG8Q99932 426 aaPredicted RBP14.56□□□□□ -0.08
SKP2-208ENST00000546211 OR4C46A6NHA9 309 aa14.56□□□□□ -0.08
SKP2-208ENST00000546211 CT83Q5H943 113 aa14.56□□□□□ -0.08
SKP2-208ENST00000546211 FAM210BQ96KR6 192 aa14.56□□□□□ -0.08
SKP2-208ENST00000546211 CRIP1P50238 77 aa14.55□□□□□ -0.08
SKP2-208ENST00000546211 PYGO2Q9BRQ0 406 aa14.55□□□□□ -0.08
SKP2-208ENST00000546211 TMA7Q9Y2S6 64 aaKnown RBP14.55□□□□□ -0.08
SKP2-208ENST00000546211 TRAV9-1A0A075B6T8 112 aa14.54□□□□□ -0.08
SKP2-208ENST00000546211 SH2D1AO60880 128 aa14.54□□□□□ -0.08
SKP2-208ENST00000546211 CA1P00915 261 aaPredicted RBP14.54□□□□□ -0.08
SKP2-208ENST00000546211 EBLN2Q6P2I7 272 aa14.54□□□□□ -0.08
SKP2-208ENST00000546211 SMIM27A0A1W2PRY6 76 aa14.53□□□□□ -0.08
SKP2-208ENST00000546211 A8MWL6 223 aa14.53□□□□□ -0.08
SKP2-208ENST00000546211 KRTAP24-1Q3LI83 254 aa14.53□□□□□ -0.08
SKP2-208ENST00000546211 LINC00482Q8N8I6 264 aa14.53□□□□□ -0.08
SKP2-208ENST00000546211 OR2D3Q8NGH3 330 aa14.53□□□□□ -0.08
SKP2-208ENST00000546211 TSKUQ8WUA8 353 aa14.53□□□□□ -0.08
SKP2-208ENST00000546211 TRBV7-9A0A0J9YWB2 115 aa14.52□□□□□ -0.08
SKP2-208ENST00000546211 A0A0J9YX75 114 aa14.52□□□□□ -0.08
SKP2-208ENST00000546211 FABP5P3A8MUU1 101 aa14.52□□□□□ -0.08
SKP2-208ENST00000546211 ZNF80P51504 273 aaPredicted RBP14.52□□□□□ -0.08
SKP2-208ENST00000546211 TCL1AP56279 114 aa14.52□□□□□ -0.08
SKP2-208ENST00000546211 RPS10P46783 165 aaKnown RBP14.51□□□□□ -0.09
SKP2-208ENST00000546211 RPL19P84098 196 aaKnown RBP14.51□□□□□ -0.09
SKP2-208ENST00000546211 FOXI2Q6ZQN5 318 aa14.51□□□□□ -0.09
SKP2-208ENST00000546211 SETD2Q9BYW2 2564 aaPredicted RBP14.51□□□□□ -0.09
SKP2-208ENST00000546211 IZUMO1RA6ND01 250 aa14.51□□□□□ -0.09
SKP2-208ENST00000546211 DUSP14O95147 198 aaKnown RBP14.51□□□□□ -0.09
SKP2-208ENST00000546211 CD33P20138 364 aa14.51□□□□□ -0.09
SKP2-208ENST00000546211 DEFB131AP59861 70 aa14.51□□□□□ -0.09
SKP2-208ENST00000546211 GDF5OSQ5U4N7 250 aa14.51□□□□□ -0.09
SKP2-208ENST00000546211 OR2K2Q8NGT1 345 aa14.51□□□□□ -0.09
SKP2-208ENST00000546211 SAV1Q9H4B6 383 aaPredicted RBP14.51□□□□□ -0.09
SKP2-208ENST00000546211 NAT8BQ9UHF3 227 aa14.51□□□□□ -0.09
SKP2-208ENST00000546211 IGLV1-51P01701 117 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms