RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TIMM23O14925 209 aa11.06□□□□□ -0.64
SRP54-202ENST00000546080 SRSF1Q07955 248 aaKnown RBP eCLIP11.06□□□□□ -0.64
SRP54-202ENST00000546080 FOXI2Q6ZQN5 318 aa11.06□□□□□ -0.64
SRP54-202ENST00000546080 SPANXB1Q9NS25 103 aaPredicted RBP11.06□□□□□ -0.64
SRP54-202ENST00000546080 GAGE12HA6NDE8 117 aa11.06□□□□□ -0.64
SRP54-202ENST00000546080 NBR2O15453 112 aa11.06□□□□□ -0.64
SRP54-202ENST00000546080 WFDC2Q14508 124 aa11.06□□□□□ -0.64
SRP54-202ENST00000546080 MALRD1Q5VYJ5 2156 aa11.05□□□□□ -0.64
SRP54-202ENST00000546080 TRAV40A0A0B4J280 105 aa11.05□□□□□ -0.64
SRP54-202ENST00000546080 FABP5P3A8MUU1 101 aa11.05□□□□□ -0.64
SRP54-202ENST00000546080 GATA1P15976 413 aaPredicted RBP11.05□□□□□ -0.64
SRP54-202ENST00000546080 IGFL4Q6B9Z1 124 aa11.05□□□□□ -0.64
SRP54-202ENST00000546080 ZNF575Q86XF7 245 aa11.05□□□□□ -0.64
SRP54-202ENST00000546080 Q8N8P6 123 aa11.05□□□□□ -0.64
SRP54-202ENST00000546080 HLA-DMBP28068 263 aa11.04□□□□□ -0.64
SRP54-202ENST00000546080 TAL2Q16559 108 aa11.04□□□□□ -0.64
SRP54-202ENST00000546080 Q6ZS92 163 aa11.04□□□□□ -0.64
SRP54-202ENST00000546080 CFAP47Q6ZTR5 3102 aa11.04□□□□□ -0.64
SRP54-202ENST00000546080 A0A0G2JNJ9 132 aa11.04□□□□□ -0.64
SRP54-202ENST00000546080 LY6LH3BQJ8 138 aa11.04□□□□□ -0.64
SRP54-202ENST00000546080 IGFL3Q6UXB1 125 aa11.04□□□□□ -0.64
SRP54-202ENST00000546080 MYOZ3Q8TDC0 251 aa11.04□□□□□ -0.64
SRP54-202ENST00000546080 ZNF48Q96MX3 618 aaPredicted RBP11.04□□□□□ -0.64
SRP54-202ENST00000546080 FANCD2OSQ96PS1 177 aa11.04□□□□□ -0.64
SRP54-202ENST00000546080 MRPL35Q9NZE8 188 aaKnown RBP11.04□□□□□ -0.64
SRP54-202ENST00000546080 Q9UFV3 132 aa11.04□□□□□ -0.64
SRP54-202ENST00000546080 IGLV11-55A0A075B6I3 123 aa11.03□□□□□ -0.64
SRP54-202ENST00000546080 H3BMG7 143 aa11.03□□□□□ -0.64
SRP54-202ENST00000546080 PPIFP30405 207 aaKnown RBP11.03□□□□□ -0.64
SRP54-202ENST00000546080 C12orf74Q32Q52 190 aa11.03□□□□□ -0.64
SRP54-202ENST00000546080 DTX2Q86UW9 622 aa11.03□□□□□ -0.64
SRP54-202ENST00000546080 TTC9CQ8N5M4 171 aa11.03□□□□□ -0.64
SRP54-202ENST00000546080 MAPKAPK5-AS1Q8N8E1 139 aa11.03□□□□□ -0.64
SRP54-202ENST00000546080 SPOCK3Q9BQ16 436 aa11.03□□□□□ -0.64
SRP54-202ENST00000546080 C21orf62Q9NYP8 219 aa11.03□□□□□ -0.64
SRP54-202ENST00000546080 MUC6Q6W4X9 2439 aa11.03□□□□□ -0.64
SRP54-202ENST00000546080 A0A1B0GV72 72 aa11.03□□□□□ -0.64
SRP54-202ENST00000546080 F8W735 103 aaPredicted RBP11.03□□□□□ -0.64
SRP54-202ENST00000546080 IGHV3-23P01764 117 aa11.03□□□□□ -0.64
SRP54-202ENST00000546080 ARPC1AQ92747 370 aa11.03□□□□□ -0.64
SRP54-202ENST00000546080 HIST1H4GQ99525 98 aa11.03□□□□□ -0.64
SRP54-202ENST00000546080 ONECUT1Q9UBC0 465 aa11.03□□□□□ -0.64
SRP54-202ENST00000546080 SMAD5-AS1Q9Y6J3 95 aa11.03□□□□□ -0.64
SRP54-202ENST00000546080 IGLV2-18A0A075B6J9 118 aa11.02□□□□□ -0.65
SRP54-202ENST00000546080 IGHG4P01861 327 aa11.02□□□□□ -0.65
SRP54-202ENST00000546080 SH2D6Q7Z4S9 175 aa11.02□□□□□ -0.65
SRP54-202ENST00000546080 SPATA25Q9BR10 227 aa11.02□□□□□ -0.65
SRP54-202ENST00000546080 ABCA1O95477 2261 aa11.02□□□□□ -0.65
SRP54-202ENST00000546080 ERCC8Q13216 396 aa11.01□□□□□ -0.65
SRP54-202ENST00000546080 ETDBQ3ZM63 59 aa11.01□□□□□ -0.65
SRP54-202ENST00000546080 PSMG3-AS1Q96PY0 264 aa11.01□□□□□ -0.65
SRP54-202ENST00000546080 SPAARA0A1B0GVQ0 90 aa11.01□□□□□ -0.65
SRP54-202ENST00000546080 NCBP2LA6PVI3 153 aaKnown RBP11.01□□□□□ -0.65
SRP54-202ENST00000546080 E7EQL1 145 aa11.01□□□□□ -0.65
SRP54-202ENST00000546080 NDUFS8O00217 210 aa11.01□□□□□ -0.65
SRP54-202ENST00000546080 SCGB2A1O75556 95 aa11.01□□□□□ -0.65
SRP54-202ENST00000546080 NDUFA3O95167 84 aa11.01□□□□□ -0.65
SRP54-202ENST00000546080 LAGE3Q14657 143 aa11.01□□□□□ -0.65
SRP54-202ENST00000546080 GAGE13Q4V321 117 aa11.01□□□□□ -0.65
SRP54-202ENST00000546080 DYNAPQ8N1N2 210 aa11.01□□□□□ -0.65
SRP54-202ENST00000546080 DEFB124Q8NES8 71 aa11.01□□□□□ -0.65
SRP54-202ENST00000546080 ZNF502Q8TBZ5 544 aa11.01□□□□□ -0.65
SRP54-202ENST00000546080 SPAG8Q99932 426 aaPredicted RBP11.01□□□□□ -0.65
SRP54-202ENST00000546080 A0A087WX48 190 aa11□□□□□ -0.65
SRP54-202ENST00000546080 LYNX1G3V0Z9 82 aa11□□□□□ -0.65
SRP54-202ENST00000546080 LYNX1P0DP58 116 aa11□□□□□ -0.65
SRP54-202ENST00000546080 HES1Q14469 280 aa11□□□□□ -0.65
SRP54-202ENST00000546080 AMTNQ6UX39 209 aa11□□□□□ -0.65
SRP54-202ENST00000546080 NPBQ8NG41 125 aa11□□□□□ -0.65
SRP54-202ENST00000546080 ATP6V0BQ99437 205 aa11□□□□□ -0.65
SRP54-202ENST00000546080 PLNP26678 52 aa11□□□□□ -0.65
SRP54-202ENST00000546080 RRN3P1Q2M238 152 aa11□□□□□ -0.65
SRP54-202ENST00000546080 C5orf64Q2M2E5 130 aa11□□□□□ -0.65
SRP54-202ENST00000546080 CFHR4Q92496 578 aa11□□□□□ -0.65
SRP54-202ENST00000546080 TRGV3P03979 118 aa10.99□□□□□ -0.65
SRP54-202ENST00000546080 CCDC144NLQ6NUI1 221 aa10.99□□□□□ -0.65
SRP54-202ENST00000546080 MTURNQ8N3F0 131 aa10.99□□□□□ -0.65
SRP54-202ENST00000546080 IGFBPL1Q8WX77 278 aa10.99□□□□□ -0.65
SRP54-202ENST00000546080 DPM3Q9P2X0 92 aa10.99□□□□□ -0.65
SRP54-202ENST00000546080 ZZEF1O43149 2961 aa10.99□□□□□ -0.65
SRP54-202ENST00000546080 PRRG2O14669 202 aa10.99□□□□□ -0.65
SRP54-202ENST00000546080 IL17RELQ6ZVW7 336 aa10.99□□□□□ -0.65
SRP54-202ENST00000546080 SH3BGRL2Q9UJC5 107 aa10.99□□□□□ -0.65
SRP54-202ENST00000546080 EP300Q09472 2414 aaPredicted RBP10.98□□□□□ -0.65
SRP54-202ENST00000546080 IGHV3OR16-8A0A075B7F1 116 aa10.98□□□□□ -0.65
SRP54-202ENST00000546080 PRAC2D3DTV9 90 aa10.98□□□□□ -0.65
SRP54-202ENST00000546080 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.98□□□□□ -0.65
SRP54-202ENST00000546080 UFC1Q9Y3C8 167 aa10.98□□□□□ -0.65
SRP54-202ENST00000546080 ZNF292O60281 2723 aa10.97□□□□□ -0.65
SRP54-202ENST00000546080 TRBV7-3A0A075B6L6 115 aa10.97□□□□□ -0.65
SRP54-202ENST00000546080 TRAV26-2A0A0B4J265 109 aa10.97□□□□□ -0.65
SRP54-202ENST00000546080 IGKV3D-20A0A0C4DH25 116 aa10.97□□□□□ -0.65
SRP54-202ENST00000546080 PIP4P1Q86T03 277 aa10.97□□□□□ -0.65
SRP54-202ENST00000546080 NRACQ8N912 160 aa10.97□□□□□ -0.65
SRP54-202ENST00000546080 ZFHX2Q9C0A1 2572 aaPredicted RBP10.97□□□□□ -0.65
SRP54-202ENST00000546080 ZGRF1Q86YA3 2104 aa10.97□□□□□ -0.65
SRP54-202ENST00000546080 PRSS47A8MTI9 375 aa10.97□□□□□ -0.65
SRP54-202ENST00000546080 CTSGP08311 255 aa10.97□□□□□ -0.65
SRP54-202ENST00000546080 EFNA4P52798 201 aa10.97□□□□□ -0.65
SRP54-202ENST00000546080 NDPQ00604 133 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms