RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 HLA-DRB4X5D2U9 266 aa12.57□□□□□ -0.4
CADM1-220ENST00000546000 H3BMM0 161 aa12.56□□□□□ -0.4
CADM1-220ENST00000546000 CT45A10P0DMU9 189 aa12.56□□□□□ -0.4
CADM1-220ENST00000546000 RPL35AP18077 110 aaKnown RBP12.56□□□□□ -0.4
CADM1-220ENST00000546000 RPL35P42766 123 aaKnown RBP12.56□□□□□ -0.4
CADM1-220ENST00000546000 FXYD7P58549 80 aa12.56□□□□□ -0.4
CADM1-220ENST00000546000 EBLN2Q6P2I7 272 aa12.56□□□□□ -0.4
CADM1-220ENST00000546000 PRNTQ86SH4 94 aa12.56□□□□□ -0.4
CADM1-220ENST00000546000 TVP23CQ96ET8 276 aa12.56□□□□□ -0.4
CADM1-220ENST00000546000 PARLQ9H300 379 aa12.56□□□□□ -0.4
CADM1-220ENST00000546000 SRD5A3Q9H8P0 318 aa12.56□□□□□ -0.4
CADM1-220ENST00000546000 PSG8Q9UQ74 426 aa12.56□□□□□ -0.4
CADM1-220ENST00000546000 PGPEP1LA6NFU8 196 aa12.55□□□□□ -0.4
CADM1-220ENST00000546000 TMEM250H0YL14 139 aa12.55□□□□□ -0.4
CADM1-220ENST00000546000 J3KRW8 73 aa12.55□□□□□ -0.4
CADM1-220ENST00000546000 SFTA3P0C7M3 94 aa12.55□□□□□ -0.4
CADM1-220ENST00000546000 KPRPQ5T749 579 aaPredicted RBP12.55□□□□□ -0.4
CADM1-220ENST00000546000 TMEM75Q8N9X5 138 aa12.55□□□□□ -0.4
CADM1-220ENST00000546000 NHLRC2Q8NBF2 726 aa12.55□□□□□ -0.4
CADM1-220ENST00000546000 IGF2BP2-AS1Q96M15 143 aa12.55□□□□□ -0.4
CADM1-220ENST00000546000 TCEAL7Q9BRU2 100 aa12.55□□□□□ -0.4
CADM1-220ENST00000546000 TRBV20OR9-2A0A075B6H5 130 aa12.54□□□□□ -0.4
CADM1-220ENST00000546000 RBAKDNA6NC62 111 aa12.54□□□□□ -0.4
CADM1-220ENST00000546000 UBE2G1P62253 170 aa12.54□□□□□ -0.4
CADM1-220ENST00000546000 FLI1Q01543 452 aaPredicted RBP12.54□□□□□ -0.4
CADM1-220ENST00000546000 KIR3DS1Q14943 382 aa12.54□□□□□ -0.4
CADM1-220ENST00000546000 CENPWQ5EE01 88 aa12.54□□□□□ -0.4
CADM1-220ENST00000546000 TMEM78Q5T7P6 136 aa12.54□□□□□ -0.4
CADM1-220ENST00000546000 PRR9Q5T870 116 aa12.54□□□□□ -0.4
CADM1-220ENST00000546000 AMTNQ6UX39 209 aa12.54□□□□□ -0.4
CADM1-220ENST00000546000 C9orf47Q6ZRZ4 202 aa12.54□□□□□ -0.4
CADM1-220ENST00000546000 TRPT1Q86TN4 253 aaKnown RBP12.54□□□□□ -0.4
CADM1-220ENST00000546000 C8orf49Q96NF6 230 aa12.54□□□□□ -0.4
CADM1-220ENST00000546000 FAM110AQ9BQ89 295 aa12.54□□□□□ -0.4
CADM1-220ENST00000546000 SLC35B3Q9H1N7 401 aa12.54□□□□□ -0.4
CADM1-220ENST00000546000 AURKAIP1Q9NWT8 199 aaPredicted RBP12.54□□□□□ -0.4
CADM1-220ENST00000546000 NOTCH1P46531 2555 aa12.53□□□□□ -0.4
CADM1-220ENST00000546000 SERTM2A0A1B0GWG4 89 aa12.53□□□□□ -0.4
CADM1-220ENST00000546000 M0R2Z0 102 aa12.53□□□□□ -0.4
CADM1-220ENST00000546000 ADCYAP1P18509 176 aa12.53□□□□□ -0.4
CADM1-220ENST00000546000 ZNF138P52744 262 aa12.53□□□□□ -0.4
CADM1-220ENST00000546000 CMC4P56277 68 aaPredicted RBP12.53□□□□□ -0.4
CADM1-220ENST00000546000 TMEM183BQ1AE95 376 aa12.53□□□□□ -0.4
CADM1-220ENST00000546000 STHQ8IWL8 128 aa12.53□□□□□ -0.4
CADM1-220ENST00000546000 EIF4E3Q8N5X7 224 aaKnown RBP12.53□□□□□ -0.4
CADM1-220ENST00000546000 ARL6IP6Q8N6S5 226 aa12.53□□□□□ -0.4
CADM1-220ENST00000546000 FMC1Q96HJ9 113 aa12.53□□□□□ -0.4
CADM1-220ENST00000546000 KLF12Q9Y4X4 402 aa12.53□□□□□ -0.4
CADM1-220ENST00000546000 A8MTW9 85 aa12.52□□□□□ -0.41
CADM1-220ENST00000546000 K7EQM0 130 aa12.52□□□□□ -0.41
CADM1-220ENST00000546000 DUSP14O95147 198 aaKnown RBP12.52□□□□□ -0.41
CADM1-220ENST00000546000 IGHV4-30-4P0DP06 118 aa12.52□□□□□ -0.41
CADM1-220ENST00000546000 SPINK13Q1W4C9 94 aa12.52□□□□□ -0.41
CADM1-220ENST00000546000 UQCC3Q6UW78 93 aa12.52□□□□□ -0.41
CADM1-220ENST00000546000 ZNF492Q9P255 531 aa12.52□□□□□ -0.41
CADM1-220ENST00000546000 TGP01266 2768 aa12.52□□□□□ -0.41
CADM1-220ENST00000546000 FAM19A4Q96LR4 140 aa12.51□□□□□ -0.41
CADM1-220ENST00000546000 SMIM7Q9BQ49 75 aa12.51□□□□□ -0.41
CADM1-220ENST00000546000 TRAV12-2A0A075B6T6 113 aa12.5□□□□□ -0.41
CADM1-220ENST00000546000 TMEM218A2RU14 115 aa12.5□□□□□ -0.41
CADM1-220ENST00000546000 ZNF727A8MUV8 499 aa12.5□□□□□ -0.41
CADM1-220ENST00000546000 K7EIL1 84 aa12.5□□□□□ -0.41
CADM1-220ENST00000546000 LTAP01374 205 aa12.5□□□□□ -0.41
CADM1-220ENST00000546000 BTN1A1Q13410 526 aa12.5□□□□□ -0.41
CADM1-220ENST00000546000 Q6ZQT7 251 aa12.5□□□□□ -0.41
CADM1-220ENST00000546000 ZFAND2AQ8N6M9 145 aa12.5□□□□□ -0.41
CADM1-220ENST00000546000 SMDT1Q9H4I9 107 aa12.5□□□□□ -0.41
CADM1-220ENST00000546000 TRBV6-1A0A0K0K1D8 114 aa12.49□□□□□ -0.41
CADM1-220ENST00000546000 NDUFS6O75380 124 aaKnown RBP12.49□□□□□ -0.41
CADM1-220ENST00000546000 IGLV2-8P01709 118 aa12.49□□□□□ -0.41
CADM1-220ENST00000546000 SOHLH1Q5JUK2 328 aa12.49□□□□□ -0.41
CADM1-220ENST00000546000 BAGE2Q86Y30 109 aa12.49□□□□□ -0.41
CADM1-220ENST00000546000 ZC2HC1AQ96GY0 325 aa12.49□□□□□ -0.41
CADM1-220ENST00000546000 LINC00477Q96M19 166 aa12.49□□□□□ -0.41
CADM1-220ENST00000546000 PPP1R14DQ9NXH3 145 aa12.49□□□□□ -0.41
CADM1-220ENST00000546000 GIG44P09565 113 aaPredicted RBP12.48□□□□□ -0.41
CADM1-220ENST00000546000 GNG4P50150 75 aa12.48□□□□□ -0.41
CADM1-220ENST00000546000 ZNF80P51504 273 aaPredicted RBP12.48□□□□□ -0.41
CADM1-220ENST00000546000 TAS2R60P59551 318 aa12.48□□□□□ -0.41
CADM1-220ENST00000546000 TUBA4BQ9H853 241 aa12.48□□□□□ -0.41
CADM1-220ENST00000546000 ZMAT5Q9UDW3 170 aaKnown RBP12.48□□□□□ -0.41
CADM1-220ENST00000546000 K7EN84 100 aa12.47□□□□□ -0.41
CADM1-220ENST00000546000 RBMY1A1P0DJD3 496 aaKnown RBP12.47□□□□□ -0.41
CADM1-220ENST00000546000 RBMY1CP0DJD4 496 aa12.47□□□□□ -0.41
CADM1-220ENST00000546000 LEPP41159 167 aa12.47□□□□□ -0.41
CADM1-220ENST00000546000 RBMY1FQ15415 496 aaKnown RBP12.47□□□□□ -0.41
CADM1-220ENST00000546000 NDUFA5Q16718 116 aa12.47□□□□□ -0.41
CADM1-220ENST00000546000 GFI1BQ5VTD9 330 aa12.47□□□□□ -0.41
CADM1-220ENST00000546000 ODF3Q96PU9 254 aa12.47□□□□□ -0.41
CADM1-220ENST00000546000 C9JCJ5 164 aa12.46□□□□□ -0.41
CADM1-220ENST00000546000 F8W036 122 aa12.46□□□□□ -0.41
CADM1-220ENST00000546000 CRXO43186 299 aaPredicted RBP12.46□□□□□ -0.41
CADM1-220ENST00000546000 S100A9P06702 114 aaKnown RBP12.46□□□□□ -0.41
CADM1-220ENST00000546000 MGST1P10620 155 aaKnown RBP12.46□□□□□ -0.41
CADM1-220ENST00000546000 CRISP2P16562 243 aa12.46□□□□□ -0.41
CADM1-220ENST00000546000 OR5I1Q13606 314 aa12.46□□□□□ -0.41
CADM1-220ENST00000546000 PRR27Q6MZM9 219 aa12.46□□□□□ -0.41
CADM1-220ENST00000546000 LINC00322Q6ZN03 302 aaPredicted RBP12.46□□□□□ -0.41
CADM1-220ENST00000546000 OCC1Q8TAD7 63 aa12.46□□□□□ -0.41
CADM1-220ENST00000546000 NDFIP1Q9BT67 221 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms