RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 FAM110DQ8TAY7 271 aaPredicted RBP12.12□□□□□ -0.47
SCAP-215ENST00000545718 CSPG4Q6UVK1 2322 aa12.12□□□□□ -0.47
SCAP-215ENST00000545718 GOSR1O95249 250 aa12.12□□□□□ -0.47
SCAP-215ENST00000545718 LMO4P61968 165 aa12.12□□□□□ -0.47
SCAP-215ENST00000545718 LOXL1Q08397 574 aaPredicted RBP12.12□□□□□ -0.47
SCAP-215ENST00000545718 PRELID3AQ96N28 172 aa12.12□□□□□ -0.47
SCAP-215ENST00000545718 NPFFO15130 113 aa12.12□□□□□ -0.47
SCAP-215ENST00000545718 FER1L6-AS1Q8NA97 138 aa12.12□□□□□ -0.47
SCAP-215ENST00000545718 ZNF502Q8TBZ5 544 aa12.12□□□□□ -0.47
SCAP-215ENST00000545718 FAM208BQ5VWN6 2430 aa12.11□□□□□ -0.47
SCAP-215ENST00000545718 MSRB1Q9NZV6 116 aa12.11□□□□□ -0.47
SCAP-215ENST00000545718 IGHG4P01861 327 aa12.1□□□□□ -0.47
SCAP-215ENST00000545718 CKS2P33552 79 aa12.1□□□□□ -0.47
SCAP-215ENST00000545718 OR10AG1Q8NH19 301 aa12.1□□□□□ -0.47
SCAP-215ENST00000545718 ITLN2Q8WWU7 325 aaPredicted RBP12.1□□□□□ -0.47
SCAP-215ENST00000545718 A0A1B0GW15 77 aa12.1□□□□□ -0.47
SCAP-215ENST00000545718 SNAI2O43623 268 aa12.1□□□□□ -0.47
SCAP-215ENST00000545718 BMI1P35226 326 aa12.1□□□□□ -0.47
SCAP-215ENST00000545718 FAM104BQ5XKR9 115 aa12.1□□□□□ -0.47
SCAP-215ENST00000545718 AJUBAQ96IF1 538 aa12.1□□□□□ -0.47
SCAP-215ENST00000545718 CSMD2Q7Z408 3487 aa12.1□□□□□ -0.47
SCAP-215ENST00000545718 CENPVL3A0A0U1RRI6 287 aa12.09□□□□□ -0.47
SCAP-215ENST00000545718 BUB3O43684 328 aa12.09□□□□□ -0.47
SCAP-215ENST00000545718 WFDC3Q8IUB2 231 aa12.09□□□□□ -0.47
SCAP-215ENST00000545718 ORMDL3Q8N138 153 aa12.09□□□□□ -0.47
SCAP-215ENST00000545718 CCDC140Q96MF4 163 aa12.09□□□□□ -0.47
SCAP-215ENST00000545718 SIGLEC8Q9NYZ4 499 aa12.09□□□□□ -0.47
SCAP-215ENST00000545718 MRPL51Q4U2R6 128 aaKnown RBP12.09□□□□□ -0.47
SCAP-215ENST00000545718 IL17RELQ6ZVW7 336 aa12.09□□□□□ -0.47
SCAP-215ENST00000545718 J3KRW8 73 aa12.09□□□□□ -0.47
SCAP-215ENST00000545718 CRXO43186 299 aaPredicted RBP12.09□□□□□ -0.47
SCAP-215ENST00000545718 LY6EQ16553 131 aa12.09□□□□□ -0.47
SCAP-215ENST00000545718 ERASQ7Z444 233 aa12.09□□□□□ -0.47
SCAP-215ENST00000545718 ZFAND3Q9H8U3 227 aa12.08□□□□□ -0.48
SCAP-215ENST00000545718 SELENOKQ9Y6D0 94 aa12.08□□□□□ -0.48
SCAP-215ENST00000545718 TRAV40A0A0B4J280 105 aa12.08□□□□□ -0.48
SCAP-215ENST00000545718 PET117Q6UWS5 81 aa12.08□□□□□ -0.48
SCAP-215ENST00000545718 EEF1AKMT3Q96AZ1 226 aa12.08□□□□□ -0.48
SCAP-215ENST00000545718 MRPS16Q9Y3D3 137 aaKnown RBP12.08□□□□□ -0.48
SCAP-215ENST00000545718 S100A7P31151 101 aa12.07□□□□□ -0.48
SCAP-215ENST00000545718 MPV17L2Q567V2 206 aa12.07□□□□□ -0.48
SCAP-215ENST00000545718 FABP5P3A8MUU1 101 aa12.07□□□□□ -0.48
SCAP-215ENST00000545718 SLC25A34Q6PIV7 304 aa12.07□□□□□ -0.48
SCAP-215ENST00000545718 METTL26Q96S19 204 aa12.07□□□□□ -0.48
SCAP-215ENST00000545718 ZNF747Q9BV97 191 aa12.07□□□□□ -0.48
SCAP-215ENST00000545718 ST20Q9HBF5 79 aa12.07□□□□□ -0.48
SCAP-215ENST00000545718 ABCA2Q9BZC7 2435 aa12.07□□□□□ -0.48
SCAP-215ENST00000545718 IGHV4-39P01824 125 aa12.06□□□□□ -0.48
SCAP-215ENST00000545718 DMRTA1Q5VZB9 504 aa12.06□□□□□ -0.48
SCAP-215ENST00000545718 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.06□□□□□ -0.48
SCAP-215ENST00000545718 IGKV3-7A0A075B6H7 116 aa12.06□□□□□ -0.48
SCAP-215ENST00000545718 NPYP01303 97 aa12.06□□□□□ -0.48
SCAP-215ENST00000545718 TMEM190Q8WZ59 177 aa12.06□□□□□ -0.48
SCAP-215ENST00000545718 USP9XQ93008 2570 aaPredicted RBP12.06□□□□□ -0.48
SCAP-215ENST00000545718 TCF21O43680 179 aa12.06□□□□□ -0.48
SCAP-215ENST00000545718 NUDT3O95989 172 aa12.06□□□□□ -0.48
SCAP-215ENST00000545718 ATP5G2Q06055 141 aa12.06□□□□□ -0.48
SCAP-215ENST00000545718 PRSS57Q6UWY2 283 aa12.06□□□□□ -0.48
SCAP-215ENST00000545718 ZNF493Q6ZR52 646 aa12.06□□□□□ -0.48
SCAP-215ENST00000545718 C5orf56Q8N8D9 126 aa12.06□□□□□ -0.48
SCAP-215ENST00000545718 TRGV3P03979 118 aa12.05□□□□□ -0.48
SCAP-215ENST00000545718 EVI2AP22794 236 aa12.05□□□□□ -0.48
SCAP-215ENST00000545718 CLPSL1A2RUU4 121 aa12.05□□□□□ -0.48
SCAP-215ENST00000545718 RPS20P60866 119 aaKnown RBP12.05□□□□□ -0.48
SCAP-215ENST00000545718 C18orf15Q96N68 181 aa12.05□□□□□ -0.48
SCAP-215ENST00000545718 GAS8-AS1O95177 125 aa12.04□□□□□ -0.48
SCAP-215ENST00000545718 AGPAT4-IT1Q9H0P7 198 aa12.04□□□□□ -0.48
SCAP-215ENST00000545718 POLQO75417 2590 aa12.04□□□□□ -0.48
SCAP-215ENST00000545718 LRRK2Q5S007 2527 aa12.04□□□□□ -0.48
SCAP-215ENST00000545718 TRAV41A0A0B4J266 112 aa12.04□□□□□ -0.48
SCAP-215ENST00000545718 IGHV3-11P01762 117 aa12.04□□□□□ -0.48
SCAP-215ENST00000545718 RPL11P62913 178 aaKnown RBP12.04□□□□□ -0.48
SCAP-215ENST00000545718 TMEM78Q5T7P6 136 aa12.04□□□□□ -0.48
SCAP-215ENST00000545718 USP9YO00507 2555 aaPredicted RBP12.04□□□□□ -0.48
SCAP-215ENST00000545718 ZNF462Q96JM2 2506 aa12.04□□□□□ -0.48
SCAP-215ENST00000545718 USP24Q9UPU5 2620 aa12.04□□□□□ -0.48
SCAP-215ENST00000545718 IGHV4-61A0A0C4DH41 118 aa12.03□□□□□ -0.48
SCAP-215ENST00000545718 CACNG7P62955 275 aa12.03□□□□□ -0.48
SCAP-215ENST00000545718 Q6ZQT7 251 aa12.03□□□□□ -0.48
SCAP-215ENST00000545718 A0A087X0K7 114 aa12.03□□□□□ -0.48
SCAP-215ENST00000545718 A0A096LNJ9 63 aa12.03□□□□□ -0.48
SCAP-215ENST00000545718 C8orf86Q6ZUL3 223 aa12.03□□□□□ -0.48
SCAP-215ENST00000545718 C16orf92Q96LL3 132 aa12.03□□□□□ -0.48
SCAP-215ENST00000545718 RAB9AP51151 201 aa12.03□□□□□ -0.48
SCAP-215ENST00000545718 LINC01545Q5VT33 79 aa12.03□□□□□ -0.48
SCAP-215ENST00000545718 GATD1Q8NB37 220 aa12.03□□□□□ -0.48
SCAP-215ENST00000545718 MOB4Q9Y3A3 225 aa12.03□□□□□ -0.48
SCAP-215ENST00000545718 CELSR2Q9HCU4 2923 aa12.02□□□□□ -0.48
SCAP-215ENST00000545718 IGLC6P0CF74 106 aa12.02□□□□□ -0.49
SCAP-215ENST00000545718 GATA1P15976 413 aaPredicted RBP12.02□□□□□ -0.49
SCAP-215ENST00000545718 LCNL1Q6ZST4 164 aa12.02□□□□□ -0.49
SCAP-215ENST00000545718 SLC50A1Q9BRV3 221 aa12.02□□□□□ -0.49
SCAP-215ENST00000545718 DOPEY2Q9Y3R5 2298 aa12.02□□□□□ -0.49
SCAP-215ENST00000545718 TRBV7-1A0A0A6YYK4 115 aa12.02□□□□□ -0.49
SCAP-215ENST00000545718 FBLL1A6NHQ2 334 aaKnown RBP12.02□□□□□ -0.49
SCAP-215ENST00000545718 TRBV12-3P01733 135 aa12.02□□□□□ -0.49
SCAP-215ENST00000545718 PAX8Q06710 450 aa12.02□□□□□ -0.49
SCAP-215ENST00000545718 UFC1Q9Y3C8 167 aa12.02□□□□□ -0.49
SCAP-215ENST00000545718 PTTG1IPP53801 180 aa12.01□□□□□ -0.49
SCAP-215ENST00000545718 HBDP02042 147 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms