RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 CLEC2BQ92478 149 aa1.29□□□□□ -2.2
LEMD3-206ENST00000545026 LIMD2Q9BT23 127 aa1.29□□□□□ -2.2
LEMD3-206ENST00000545026 TRBV7-6A0A0J9YX20 115 aa1.28□□□□□ -2.2
LEMD3-206ENST00000545026 C5orf58C9J3I9 102 aa1.28□□□□□ -2.2
LEMD3-206ENST00000545026 TRACP01848 142 aa1.28□□□□□ -2.2
LEMD3-206ENST00000545026 MAXP61244 160 aa1.28□□□□□ -2.2
LEMD3-206ENST00000545026 TMEM128Q5BJH2 165 aa1.28□□□□□ -2.2
LEMD3-206ENST00000545026 LINC00299Q6ZSB3 139 aa1.28□□□□□ -2.2
LEMD3-206ENST00000545026 OR5AK2Q8NH90 309 aa1.28□□□□□ -2.2
LEMD3-206ENST00000545026 TRAPPC2LQ9UL33 140 aa1.28□□□□□ -2.2
LEMD3-206ENST00000545026 BCL9O00512 1426 aa1.28□□□□□ -2.2
LEMD3-206ENST00000545026 ANKRD31Q8N7Z5 1873 aa1.28□□□□□ -2.2
LEMD3-206ENST00000545026 TPT1P13693 172 aaKnown RBP1.27□□□□□ -2.21
LEMD3-206ENST00000545026 LXNQ9BS40 222 aa1.27□□□□□ -2.21
LEMD3-206ENST00000545026 NUP210Q8TEM1 1887 aaPredicted RBP1.26□□□□□ -2.21
LEMD3-206ENST00000545026 DLC1Q96QB1 1528 aa1.26□□□□□ -2.21
LEMD3-206ENST00000545026 TRAV13-1A0A0B4J241 112 aa1.26□□□□□ -2.21
LEMD3-206ENST00000545026 A0A0J9YY99 117 aa1.26□□□□□ -2.21
LEMD3-206ENST00000545026 B2MP61769 119 aa1.26□□□□□ -2.21
LEMD3-206ENST00000545026 SAMD13Q5VXD3 122 aa1.26□□□□□ -2.21
LEMD3-206ENST00000545026 CASC2Q6XLA1 102 aa1.26□□□□□ -2.21
LEMD3-206ENST00000545026 OR9Q1Q8NGQ5 310 aa1.26□□□□□ -2.21
LEMD3-206ENST00000545026 RPS3P23396 243 aaKnown RBP eCLIP1.25□□□□□ -2.21
LEMD3-206ENST00000545026 OCIAD2Q56VL3 154 aa1.25□□□□□ -2.21
LEMD3-206ENST00000545026 MORN4Q8NDC4 146 aa1.25□□□□□ -2.21
LEMD3-206ENST00000545026 CCDC115Q96NT0 180 aa1.25□□□□□ -2.21
LEMD3-206ENST00000545026 FAM135BQ49AJ0 1406 aa1.24□□□□□ -2.21
LEMD3-206ENST00000545026 CITO14578 2027 aa1.24□□□□□ -2.21
LEMD3-206ENST00000545026 LOC107984640A0A0U1RRK4 108 aa1.24□□□□□ -2.21
LEMD3-206ENST00000545026 C3orf85A0A1B0GTC6 90 aa1.24□□□□□ -2.21
LEMD3-206ENST00000545026 PRORSD1PA6NEY8 169 aa1.24□□□□□ -2.21
LEMD3-206ENST00000545026 H3BMG7 143 aa1.24□□□□□ -2.21
LEMD3-206ENST00000545026 SAA1P0DJI8 122 aaPredicted RBP1.24□□□□□ -2.21
LEMD3-206ENST00000545026 FOXA3P55318 350 aaPredicted RBP1.24□□□□□ -2.21
LEMD3-206ENST00000545026 FXYD4P59646 89 aa1.24□□□□□ -2.21
LEMD3-206ENST00000545026 NEDD8Q15843 81 aa1.24□□□□□ -2.21
LEMD3-206ENST00000545026 NABP2Q9BQ15 211 aa1.24□□□□□ -2.21
LEMD3-206ENST00000545026 CBLN4Q9NTU7 201 aa1.24□□□□□ -2.21
LEMD3-206ENST00000545026 FKBP11Q9NYL4 201 aa1.24□□□□□ -2.21
LEMD3-206ENST00000545026 NDUFAF1Q9Y375 327 aa1.24□□□□□ -2.21
LEMD3-206ENST00000545026 H0YJX3 145 aa1.23□□□□□ -2.21
LEMD3-206ENST00000545026 S100GP29377 79 aa1.23□□□□□ -2.21
LEMD3-206ENST00000545026 PDE6GP18545 87 aa1.22□□□□□ -2.21
LEMD3-206ENST00000545026 ZGRF1Q86YA3 2104 aa1.22□□□□□ -2.21
LEMD3-206ENST00000545026 CRYGSP22914 178 aa1.21□□□□□ -2.22
LEMD3-206ENST00000545026 SRP9P49458 86 aaKnown RBP1.21□□□□□ -2.22
LEMD3-206ENST00000545026 CIB3Q96Q77 187 aaPredicted RBP1.21□□□□□ -2.22
LEMD3-206ENST00000545026 BOKQ9UMX3 212 aaPredicted RBP1.21□□□□□ -2.22
LEMD3-206ENST00000545026 FANCMQ8IYD8 2048 aa1.21□□□□□ -2.22
LEMD3-206ENST00000545026 A2MP01023 1474 aa1.2□□□□□ -2.22
LEMD3-206ENST00000545026 IZUMO2Q6UXV1 221 aa1.2□□□□□ -2.22
LEMD3-206ENST00000545026 NAT14Q8WUY8 206 aa1.2□□□□□ -2.22
LEMD3-206ENST00000545026 LPAR5Q9H1C0 372 aa1.2□□□□□ -2.22
LEMD3-206ENST00000545026 ZDBF2Q9HCK1 2354 aa1.19□□□□□ -2.22
LEMD3-206ENST00000545026 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.19□□□□□ -2.22
LEMD3-206ENST00000545026 LOC107986453A0A1B0GWG9 222 aa1.19□□□□□ -2.22
LEMD3-206ENST00000545026 RPL37AP61513 92 aaKnown RBP1.19□□□□□ -2.22
LEMD3-206ENST00000545026 TMEM35BQ8NCS4 154 aa1.19□□□□□ -2.22
LEMD3-206ENST00000545026 OR51A4Q8NGJ6 313 aa1.19□□□□□ -2.22
LEMD3-206ENST00000545026 ZNF462Q96JM2 2506 aa1.19□□□□□ -2.22
LEMD3-206ENST00000545026 GNG14A0A1W2PPG7 69 aa1.18□□□□□ -2.22
LEMD3-206ENST00000545026 ZNF727A8MUV8 499 aa1.18□□□□□ -2.22
LEMD3-206ENST00000545026 TSTD3H0UI37 97 aa1.18□□□□□ -2.22
LEMD3-206ENST00000545026 K7EIL1 84 aa1.18□□□□□ -2.22
LEMD3-206ENST00000545026 M0QZK8 103 aa1.18□□□□□ -2.22
LEMD3-206ENST00000545026 IGHV3-30P01768 117 aa1.18□□□□□ -2.22
LEMD3-206ENST00000545026 IGHV3-30-5P0DP03 117 aa1.18□□□□□ -2.22
LEMD3-206ENST00000545026 SLC25A4P12235 298 aa1.18□□□□□ -2.22
LEMD3-206ENST00000545026 C5orf17Q8NAS9 161 aa1.18□□□□□ -2.22
LEMD3-206ENST00000545026 BRK1Q8WUW1 75 aa1.18□□□□□ -2.22
LEMD3-206ENST00000545026 USP54Q70EL1 1684 aa1.18□□□□□ -2.22
LEMD3-206ENST00000545026 MUC4Q99102 2169 aa1.17□□□□□ -2.22
LEMD3-206ENST00000545026 FGD6Q6ZV73 1430 aa1.17□□□□□ -2.22
LEMD3-206ENST00000545026 TRBV30A0A0K0K1B3 111 aa1.17□□□□□ -2.22
LEMD3-206ENST00000545026 NBEAP1P0C6P0 100 aa1.17□□□□□ -2.22
LEMD3-206ENST00000545026 SKA2Q8WVK7 121 aaPredicted RBP1.17□□□□□ -2.22
LEMD3-206ENST00000545026 MRPL40Q9NQ50 206 aaKnown RBP1.17□□□□□ -2.22
LEMD3-206ENST00000545026 MPC1Q9Y5U8 109 aa1.17□□□□□ -2.22
LEMD3-206ENST00000545026 PTPRDP23468 1912 aa1.17□□□□□ -2.22
LEMD3-206ENST00000545026 LOC107984156A0A0G2JMH3 177 aa1.16□□□□□ -2.22
LEMD3-206ENST00000545026 A6NN06 94 aa1.16□□□□□ -2.22
LEMD3-206ENST00000545026 PRB4P10163 310 aaPredicted RBP1.16□□□□□ -2.22
LEMD3-206ENST00000545026 CCL4P13236 92 aa1.16□□□□□ -2.22
LEMD3-206ENST00000545026 RPL22P35268 128 aaKnown RBP1.16□□□□□ -2.22
LEMD3-206ENST00000545026 BLCAPP62952 87 aa1.16□□□□□ -2.22
LEMD3-206ENST00000545026 Q6ZQY7 126 aa1.16□□□□□ -2.22
LEMD3-206ENST00000545026 KRTAP19-3Q7Z4W3 81 aa1.16□□□□□ -2.22
LEMD3-206ENST00000545026 ARL17AQ8IVW1 177 aa1.16□□□□□ -2.22
LEMD3-206ENST00000545026 TMEM229BQ8NBD8 167 aa1.16□□□□□ -2.22
LEMD3-206ENST00000545026 OR5A2Q8NGI9 324 aa1.16□□□□□ -2.22
LEMD3-206ENST00000545026 GINS2Q9Y248 185 aa1.16□□□□□ -2.22
LEMD3-206ENST00000545026 NUPR2A6NF83 97 aa1.15□□□□□ -2.23
LEMD3-206ENST00000545026 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
LEMD3-206ENST00000545026 C10orf111Q8N326 155 aa1.15□□□□□ -2.23
LEMD3-206ENST00000545026 TCTEX1D1Q8N7M0 179 aa1.15□□□□□ -2.23
LEMD3-206ENST00000545026 AP1S3Q96PC3 154 aa1.15□□□□□ -2.23
LEMD3-206ENST00000545026 ZFC3H1O60293 1989 aaKnown RBP1.15□□□□□ -2.23
LEMD3-206ENST00000545026 ARL5CA6NH57 179 aa1.14□□□□□ -2.23
LEMD3-206ENST00000545026 CCL19Q99731 98 aa1.14□□□□□ -2.23
LEMD3-206ENST00000545026 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms