RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, humanhuman

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-205ENST00000544506 TSPAN32Q96QS1 320 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 MRPL57Q9BQC6 102 aaKnown RBP1.14□□□□□ -2.23
LEMD3-205ENST00000544506 DERL1Q9BUN8 251 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 LINC00470Q9BZP3 86 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 DPY30Q9C005 99 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 MAP1LC3BQ9GZQ8 125 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 FXYD6Q9H0Q3 95 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 TLNRD1Q9H1K6 362 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 TCEAL2Q9H3H9 227 aaPredicted RBP1.14□□□□□ -2.23
LEMD3-205ENST00000544506 ENY2Q9NPA8 101 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 CISHQ9NSE2 258 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 TMEM242Q9NWH2 141 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 FKBP11Q9NYL4 201 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 RABAC1Q9UI14 185 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 CYSLTR1Q9Y271 337 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 LAMTOR2Q9Y2Q5 125 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 POLR1DQ9Y2S0 133 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 NOP16Q9Y3C1 178 aaKnown RBP1.14□□□□□ -2.23
LEMD3-205ENST00000544506 UFC1Q9Y3C8 167 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 AFDNP55196 1824 aaKnown RBP1.14□□□□□ -2.23
LEMD3-205ENST00000544506 ECM29Q5VYK3 1845 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 SPHKAPQ2M3C7 1700 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 KIAA1551Q9HCM1 1747 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 PREX2Q70Z35 1606 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 URB2Q14146 1524 aaKnown RBP1.14□□□□□ -2.23
LEMD3-205ENST00000544506 ANKRD31Q8N7Z5 1873 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 TANC1Q9C0D5 1861 aa1.14□□□□□ -2.23
LEMD3-205ENST00000544506 LAMB1P07942 1786 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 UNC13BO14795 1591 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 ABCA8O94911 1581 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 ADAMTS12P58397 1594 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 GREB1Q4ZG55 1949 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 ABCC10Q5T3U5 1492 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 LAMA4Q16363 1823 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 ARHGEF28Q8N1W1 1705 aaKnown RBP1.13□□□□□ -2.23
LEMD3-205ENST00000544506 IGHV1-69-2A0A0G2JMI3 117 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 A0A0G2JMM0 328 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 A0A1B0GW64 132 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 A0A1W2PPB8 328 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 hADV38S2A0JD32 116 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 KIR3DP1A8MWS1 328 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 IBA57-AS1B1ANH7 110 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 UMAD1C9J7I0 102 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 H7C1C5 153 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 PIRO00625 290 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 LEPROTO15243 131 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 UBL3O95164 117 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 CFDP00746 253 aaPredicted RBP1.13□□□□□ -2.23
LEMD3-205ENST00000544506 CD14P08571 375 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 SMIM10L2AP0DMW4 78 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 SMIM10L2BP0DMW5 78 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 HIST1H1EP10412 219 aaKnown RBP1.13□□□□□ -2.23
LEMD3-205ENST00000544506 SLC25A4P12235 298 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 PIPP12273 146 aaPredicted RBP1.13□□□□□ -2.23
LEMD3-205ENST00000544506 RPS4Y1P22090 263 aaKnown RBP1.13□□□□□ -2.23
LEMD3-205ENST00000544506 CCL1P22362 96 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 EVI2AP22794 236 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 PPIBP23284 216 aaKnown RBP1.13□□□□□ -2.23
LEMD3-205ENST00000544506 SMIM11AP58511 58 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 RHOGP84095 191 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 PRB3Q04118 309 aaPredicted RBP1.13□□□□□ -2.23
LEMD3-205ENST00000544506 SSBP1Q04837 148 aaKnown RBP1.13□□□□□ -2.23
LEMD3-205ENST00000544506 HSD52Q0P140 79 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 PLCXD2Q0VAA5 305 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 MLLT11Q13015 90 aaPredicted RBP1.13□□□□□ -2.23
LEMD3-205ENST00000544506 CCSMST1Q4G0I0 132 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 KHDC3LQ587J8 217 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 TMEM97Q5BJF2 176 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 FAM27BQ5VT28 67 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 SYPL2Q5VXT5 272 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 CD200R1LQ6Q8B3 271 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 HEPN1Q6WQI6 88 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 GKN2Q86XP6 184 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 LINC00471Q8N535 108 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 SMIM20Q8N5G0 67 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 TEX29Q8N6K0 151 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 ZNF676Q8N7Q3 588 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 OR5AK2Q8NH90 309 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 ZNF418Q8TF45 676 aaPredicted RBP1.13□□□□□ -2.23
LEMD3-205ENST00000544506 BORCS7Q96B45 105 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 S100A16Q96FQ6 103 aaKnown RBP1.13□□□□□ -2.23
LEMD3-205ENST00000544506 HIST1H2BLQ99880 126 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 PMCHL2Q9BQD1 86 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 SLC25A21Q9BQT8 299 aaPredicted RBP1.13□□□□□ -2.23
LEMD3-205ENST00000544506 EFCAB11Q9BUY7 163 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 SMIM3Q9BZL3 60 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 C20orf27Q9GZN8 174 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 SLC35B3Q9H1N7 401 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 OR51I2Q9H344 312 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 CBLN4Q9NTU7 201 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 MED29Q9NX70 200 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 MRPL27Q9P0M9 148 aaKnown RBP1.13□□□□□ -2.23
LEMD3-205ENST00000544506 NAT8BQ9UHF3 227 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 AK3Q9UIJ7 227 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 JPT1Q9UK76 154 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 V9GYH0 126 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 PHRF1Q9P1Y6 1649 aaKnown RBP1.13□□□□□ -2.23
LEMD3-205ENST00000544506 MCM3APO60318 1980 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 FER1L6Q2WGJ9 1857 aa1.13□□□□□ -2.23
LEMD3-205ENST00000544506 DOCK5Q9H7D0 1870 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms