RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 PSG8Q9UQ74 426 aa7.95□□□□□ -1.14
DDB1-221ENST00000543162 TRBV20OR9-2A0A075B6H5 130 aa7.94□□□□□ -1.14
DDB1-221ENST00000543162 A0A0J9YX75 114 aa7.94□□□□□ -1.14
DDB1-221ENST00000543162 TRBV6-1A0A0K0K1D8 114 aa7.94□□□□□ -1.14
DDB1-221ENST00000543162 C9JCJ5 164 aa7.94□□□□□ -1.14
DDB1-221ENST00000543162 NPIPB6E9PJ23 425 aa7.94□□□□□ -1.14
DDB1-221ENST00000543162 DUSP14O95147 198 aaKnown RBP7.94□□□□□ -1.14
DDB1-221ENST00000543162 ZNF138P52744 262 aa7.94□□□□□ -1.14
DDB1-221ENST00000543162 ODF3L2Q3SX64 289 aa7.94□□□□□ -1.14
DDB1-221ENST00000543162 C10orf91Q5T1B1 145 aa7.94□□□□□ -1.14
DDB1-221ENST00000543162 BAGE2Q86Y30 109 aa7.94□□□□□ -1.14
DDB1-221ENST00000543162 Q8TAT8 98 aa7.94□□□□□ -1.14
DDB1-221ENST00000543162 IGF2BP2-AS1Q96M15 143 aa7.94□□□□□ -1.14
DDB1-221ENST00000543162 LINC00477Q96M19 166 aa7.94□□□□□ -1.14
DDB1-221ENST00000543162 AGPAT4-IT1Q9H0P7 198 aa7.94□□□□□ -1.14
DDB1-221ENST00000543162 SAV1Q9H4B6 383 aaPredicted RBP7.94□□□□□ -1.14
DDB1-221ENST00000543162 NAT8Q9UHE5 227 aa7.94□□□□□ -1.14
DDB1-221ENST00000543162 CARHSP1Q9Y2V2 147 aaKnown RBP7.94□□□□□ -1.14
DDB1-221ENST00000543162 KNCNA6PVL3 124 aa7.93□□□□□ -1.14
DDB1-221ENST00000543162 LTAP01374 205 aa7.93□□□□□ -1.14
DDB1-221ENST00000543162 APOC3P02656 99 aa7.93□□□□□ -1.14
DDB1-221ENST00000543162 CD7P09564 240 aa7.93□□□□□ -1.14
DDB1-221ENST00000543162 S100A1P23297 94 aa7.93□□□□□ -1.14
DDB1-221ENST00000543162 KRTAP21-3Q3LHN1 58 aa7.93□□□□□ -1.14
DDB1-221ENST00000543162 OXLD1Q5BKU9 147 aa7.93□□□□□ -1.14
DDB1-221ENST00000543162 ACTL10Q5JWF8 245 aa7.93□□□□□ -1.14
DDB1-221ENST00000543162 SAPCD1Q5SSQ6 148 aa7.93□□□□□ -1.14
DDB1-221ENST00000543162 GDF5OSQ5U4N7 250 aa7.93□□□□□ -1.14
DDB1-221ENST00000543162 GTSCR1Q86UQ5 136 aa7.93□□□□□ -1.14
DDB1-221ENST00000543162 APRG1Q8IVJ8 170 aa7.93□□□□□ -1.14
DDB1-221ENST00000543162 TVP23CQ96ET8 276 aa7.93□□□□□ -1.14
DDB1-221ENST00000543162 FAM110AQ9BQ89 295 aa7.93□□□□□ -1.14
DDB1-221ENST00000543162 NDFIP1Q9BT67 221 aa7.93□□□□□ -1.14
DDB1-221ENST00000543162 ZFP30Q9Y2G7 519 aa7.93□□□□□ -1.14
DDB1-221ENST00000543162 PGPEP1LA6NFU8 196 aa7.92□□□□□ -1.14
DDB1-221ENST00000543162 IGKV3-20P01619 116 aa7.92□□□□□ -1.14
DDB1-221ENST00000543162 MGST1P10620 155 aaKnown RBP7.92□□□□□ -1.14
DDB1-221ENST00000543162 HLA-DRB4P13762 266 aa7.92□□□□□ -1.14
DDB1-221ENST00000543162 PNRC1Q12796 327 aaPredicted RBP7.92□□□□□ -1.14
DDB1-221ENST00000543162 ZNF124Q15973 351 aa7.92□□□□□ -1.14
DDB1-221ENST00000543162 TMEM183AQ8IXX5 376 aa7.92□□□□□ -1.14
DDB1-221ENST00000543162 NHLRC2Q8NBF2 726 aa7.92□□□□□ -1.14
DDB1-221ENST00000543162 OR4B1Q8NGF8 309 aa7.92□□□□□ -1.14
DDB1-221ENST00000543162 OCC1Q8TAD7 63 aa7.92□□□□□ -1.14
DDB1-221ENST00000543162 SMIM12Q96EX1 92 aa7.92□□□□□ -1.14
DDB1-221ENST00000543162 PRR25Q96S07 402 aa7.92□□□□□ -1.14
DDB1-221ENST00000543162 ASCL2Q99929 193 aa7.92□□□□□ -1.14
DDB1-221ENST00000543162 SDF2L1Q9HCN8 221 aa7.92□□□□□ -1.14
DDB1-221ENST00000543162 AURKAIP1Q9NWT8 199 aaPredicted RBP7.92□□□□□ -1.14
DDB1-221ENST00000543162 PPP1R14DQ9NXH3 145 aa7.92□□□□□ -1.14
DDB1-221ENST00000543162 ZNF492Q9P255 531 aa7.92□□□□□ -1.14
DDB1-221ENST00000543162 ZMAT5Q9UDW3 170 aaKnown RBP7.92□□□□□ -1.14
DDB1-221ENST00000543162 LY96Q9Y6Y9 160 aa7.92□□□□□ -1.14
DDB1-221ENST00000543162 HLA-DRB4X5D2U9 266 aa7.92□□□□□ -1.14
DDB1-221ENST00000543162 H3BMM0 161 aa7.91□□□□□ -1.14
DDB1-221ENST00000543162 M0R036 132 aa7.91□□□□□ -1.14
DDB1-221ENST00000543162 CT45A10P0DMU9 189 aa7.91□□□□□ -1.14
DDB1-221ENST00000543162 RPL23P62829 140 aaKnown RBP7.91□□□□□ -1.14
DDB1-221ENST00000543162 ADIRFQ15847 76 aa7.91□□□□□ -1.14
DDB1-221ENST00000543162 LINC01551Q86U37 167 aa7.91□□□□□ -1.14
DDB1-221ENST00000543162 SVBPQ8N300 66 aa7.91□□□□□ -1.14
DDB1-221ENST00000543162 C19orf73Q9NVV2 129 aa7.91□□□□□ -1.14
DDB1-221ENST00000543162 LENEPQ9Y5L5 61 aa7.91□□□□□ -1.14
DDB1-221ENST00000543162 TRBV7-9A0A0J9YWB2 115 aa7.9□□□□□ -1.14
DDB1-221ENST00000543162 IGLV2-8P01709 118 aa7.9□□□□□ -1.14
DDB1-221ENST00000543162 STHQ8IWL8 128 aa7.9□□□□□ -1.14
DDB1-221ENST00000543162 C8orf49Q96NF6 230 aa7.9□□□□□ -1.14
DDB1-221ENST00000543162 ODF3Q96PU9 254 aa7.9□□□□□ -1.14
DDB1-221ENST00000543162 MLST8Q9BVC4 326 aa7.9□□□□□ -1.14
DDB1-221ENST00000543162 WFDC10AQ9H1F0 79 aa7.9□□□□□ -1.14
DDB1-221ENST00000543162 BIN3Q9NQY0 253 aa7.9□□□□□ -1.14
DDB1-221ENST00000543162 AGRNO00468 2067 aa7.9□□□□□ -1.15
DDB1-221ENST00000543162 K7EN84 100 aa7.89□□□□□ -1.15
DDB1-221ENST00000543162 SNAPINO95295 136 aa7.89□□□□□ -1.15
DDB1-221ENST00000543162 GCGP01275 180 aa7.89□□□□□ -1.15
DDB1-221ENST00000543162 TSPOP30536 169 aa7.89□□□□□ -1.15
DDB1-221ENST00000543162 LEPP41159 167 aa7.89□□□□□ -1.15
DDB1-221ENST00000543162 EGFEM1PQ0D2K5 195 aa7.89□□□□□ -1.15
DDB1-221ENST00000543162 OR5I1Q13606 314 aa7.89□□□□□ -1.15
DDB1-221ENST00000543162 SMUG1Q53HV7 270 aa7.89□□□□□ -1.15
DDB1-221ENST00000543162 PRR27Q6MZM9 219 aa7.89□□□□□ -1.15
DDB1-221ENST00000543162 DEFB125Q8N687 156 aa7.89□□□□□ -1.15
DDB1-221ENST00000543162 CLRN3Q8NCR9 226 aa7.89□□□□□ -1.15
DDB1-221ENST00000543162 ZC2HC1AQ96GY0 325 aa7.89□□□□□ -1.15
DDB1-221ENST00000543162 FAM19A4Q96LR4 140 aa7.89□□□□□ -1.15
DDB1-221ENST00000543162 CLUHP3Q96NS8 147 aa7.89□□□□□ -1.15
DDB1-221ENST00000543162 A8MTW9 85 aa7.88□□□□□ -1.15
DDB1-221ENST00000543162 G3V4G9 280 aa7.88□□□□□ -1.15
DDB1-221ENST00000543162 J3KRW8 73 aa7.88□□□□□ -1.15
DDB1-221ENST00000543162 GPX1P07203 203 aa7.88□□□□□ -1.15
DDB1-221ENST00000543162 CRISP2P16562 243 aa7.88□□□□□ -1.15
DDB1-221ENST00000543162 SAMD5Q5TGI4 173 aa7.88□□□□□ -1.15
DDB1-221ENST00000543162 AMTNQ6UX39 209 aa7.88□□□□□ -1.15
DDB1-221ENST00000543162 COX8CQ7Z4L0 72 aa7.88□□□□□ -1.15
DDB1-221ENST00000543162 TRPT1Q86TN4 253 aaKnown RBP7.88□□□□□ -1.15
DDB1-221ENST00000543162 ZFAND2AQ8N6M9 145 aa7.88□□□□□ -1.15
DDB1-221ENST00000543162 ISOC2Q96AB3 205 aa7.88□□□□□ -1.15
DDB1-221ENST00000543162 RBMY1BA6NDE4 496 aaKnown RBP7.87□□□□□ -1.15
DDB1-221ENST00000543162 RBMY1EA6NEQ0 496 aaKnown RBP7.87□□□□□ -1.15
DDB1-221ENST00000543162 B4DEV8 164 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms