RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 HUWE1Q7Z6Z7 4374 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-203ENST00000543002 GGTLC3B5MD39 225 aa12.41□□□□□ -0.42
RABGGTA-203ENST00000543002 TMEM78Q5T7P6 136 aa12.41□□□□□ -0.42
RABGGTA-203ENST00000543002 ZNF705AQ6ZN79 300 aaPredicted RBP12.41□□□□□ -0.42
RABGGTA-203ENST00000543002 EDA2RQ9HAV5 297 aa12.41□□□□□ -0.42
RABGGTA-203ENST00000543002 GOLT1BQ9Y3E0 138 aa12.41□□□□□ -0.42
RABGGTA-203ENST00000543002 YTHDF2Q9Y5A9 579 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-203ENST00000543002 X6R8D5 127 aa12.41□□□□□ -0.42
RABGGTA-203ENST00000543002 TRAV12-2A0A075B6T6 113 aa12.4□□□□□ -0.42
RABGGTA-203ENST00000543002 FAM74A7A6NL05 159 aa12.4□□□□□ -0.42
RABGGTA-203ENST00000543002 INSP01308 110 aa12.4□□□□□ -0.42
RABGGTA-203ENST00000543002 LEPP41159 167 aa12.4□□□□□ -0.42
RABGGTA-203ENST00000543002 UBE2G2P60604 165 aa12.4□□□□□ -0.42
RABGGTA-203ENST00000543002 GNG5P63218 68 aa12.4□□□□□ -0.42
RABGGTA-203ENST00000543002 C1orf158Q8N1D5 194 aa12.4□□□□□ -0.42
RABGGTA-203ENST00000543002 FAM19A4Q96LR4 140 aa12.4□□□□□ -0.42
RABGGTA-203ENST00000543002 NKX6-2Q9C056 277 aaPredicted RBP12.4□□□□□ -0.42
RABGGTA-203ENST00000543002 ZNF492Q9P255 531 aa12.4□□□□□ -0.42
RABGGTA-203ENST00000543002 RPH3ALQ9UNE2 315 aa12.4□□□□□ -0.42
RABGGTA-203ENST00000543002 TRAV1-1A0A0B4J248 108 aa12.39□□□□□ -0.43
RABGGTA-203ENST00000543002 A0A1B0GV50 99 aa12.39□□□□□ -0.43
RABGGTA-203ENST00000543002 ZNF138P52744 262 aa12.39□□□□□ -0.43
RABGGTA-203ENST00000543002 ALKAL2Q6UX46 152 aa12.39□□□□□ -0.43
RABGGTA-203ENST00000543002 GOLT1AQ6ZVE7 132 aa12.39□□□□□ -0.43
RABGGTA-203ENST00000543002 WWC2-AS2Q96NR7 200 aa12.39□□□□□ -0.43
RABGGTA-203ENST00000543002 NEU1Q99519 415 aa12.39□□□□□ -0.43
RABGGTA-203ENST00000543002 ARL2-SNX15V9GYD0 113 aa12.39□□□□□ -0.43
RABGGTA-203ENST00000543002 IGHV3OR16-12A0A075B7B8 117 aa12.38□□□□□ -0.43
RABGGTA-203ENST00000543002 TRBV7-9A0A0J9YWB2 115 aa12.38□□□□□ -0.43
RABGGTA-203ENST00000543002 SERTM2A0A1B0GWG4 89 aa12.38□□□□□ -0.43
RABGGTA-203ENST00000543002 TCRAP04437 139 aa12.38□□□□□ -0.43
RABGGTA-203ENST00000543002 MIFP14174 115 aa12.38□□□□□ -0.43
RABGGTA-203ENST00000543002 CRISP2P16562 243 aa12.38□□□□□ -0.43
RABGGTA-203ENST00000543002 EPDR1Q9UM22 224 aa12.38□□□□□ -0.43
RABGGTA-203ENST00000543002 A0A0J9YWU9 116 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 TEX46H3BTG2 121 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 HBE1P02100 147 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 NMBP08949 121 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 PPT1P50897 306 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 KIR3DS1Q14943 382 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 GFI1BQ5VTD9 330 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 Q8NAQ8 132 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 Q8TAT8 98 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 C20orf144Q9BQM9 153 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 LENEPQ9Y5L5 61 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 IGHV4-28A0A0C4DH34 117 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 SMIM9A6NGZ8 99 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 KLLNB2CW77 178 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 K7EQM0 130 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 PAGE4O60829 102 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 IFNA7P01567 189 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 RBMY1A1P0DJD3 496 aaKnown RBP12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 RBMY1CP0DJD4 496 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 RBMY1FQ15415 496 aaKnown RBP12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 TMEM256Q8N2U0 113 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 ZFAND2AQ8N6M9 145 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 ATG101Q9BSB4 218 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 TMEM208Q9BTX3 173 aa12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 C11orf68Q9H3H3 251 aaKnown RBP12.37□□□□□ -0.43
RABGGTA-203ENST00000543002 TRAV8-1A0A0A6YYK1 113 aa12.36□□□□□ -0.43
RABGGTA-203ENST00000543002 J3KRW8 73 aa12.36□□□□□ -0.43
RABGGTA-203ENST00000543002 CCL20P78556 96 aa12.36□□□□□ -0.43
RABGGTA-203ENST00000543002 CST9LP1Q5W188 147 aa12.36□□□□□ -0.43
RABGGTA-203ENST00000543002 CCDC28AQ8IWP9 274 aa12.36□□□□□ -0.43
RABGGTA-203ENST00000543002 CYB561D1Q8N8Q1 229 aa12.36□□□□□ -0.43
RABGGTA-203ENST00000543002 C7orf71A4D174 169 aa12.35□□□□□ -0.43
RABGGTA-203ENST00000543002 HIST1H2BAQ96A08 127 aa12.35□□□□□ -0.43
RABGGTA-203ENST00000543002 TCEAL7Q9BRU2 100 aa12.35□□□□□ -0.43
RABGGTA-203ENST00000543002 TRAV12-3A0A0B4J271 114 aa12.34□□□□□ -0.43
RABGGTA-203ENST00000543002 FBLL1A6NHQ2 334 aaKnown RBP12.34□□□□□ -0.43
RABGGTA-203ENST00000543002 PEX7O00628 323 aa12.34□□□□□ -0.43
RABGGTA-203ENST00000543002 DEFB4AO15263 64 aa12.34□□□□□ -0.43
RABGGTA-203ENST00000543002 GPX1P07203 203 aa12.34□□□□□ -0.43
RABGGTA-203ENST00000543002 ATP5G3P48201 142 aa12.34□□□□□ -0.43
RABGGTA-203ENST00000543002 BLOC1S1P78537 153 aa12.34□□□□□ -0.43
RABGGTA-203ENST00000543002 RRN3P1Q2M238 152 aa12.34□□□□□ -0.43
RABGGTA-203ENST00000543002 LINC01587Q99440 93 aa12.34□□□□□ -0.43
RABGGTA-203ENST00000543002 MANBALQ9NQG1 85 aa12.34□□□□□ -0.43
RABGGTA-203ENST00000543002 F6UZH7 168 aa12.33□□□□□ -0.44
RABGGTA-203ENST00000543002 H7BYZ3 331 aa12.33□□□□□ -0.44
RABGGTA-203ENST00000543002 IGLV2-11P01706 119 aa12.33□□□□□ -0.44
RABGGTA-203ENST00000543002 RNASE4P34096 147 aaKnown RBP12.33□□□□□ -0.44
RABGGTA-203ENST00000543002 TAS2R60P59551 318 aa12.33□□□□□ -0.44
RABGGTA-203ENST00000543002 BTN1A1Q13410 526 aa12.33□□□□□ -0.44
RABGGTA-203ENST00000543002 PMS2P11Q13670 270 aa12.33□□□□□ -0.44
RABGGTA-203ENST00000543002 PRR9Q5T870 116 aa12.33□□□□□ -0.44
RABGGTA-203ENST00000543002 TMEM75Q8N9X5 138 aa12.33□□□□□ -0.44
RABGGTA-203ENST00000543002 SGK494Q96LW2 274 aa12.33□□□□□ -0.44
RABGGTA-203ENST00000543002 NIPSNAP3BQ9BS92 247 aa12.33□□□□□ -0.44
RABGGTA-203ENST00000543002 GNG13Q9P2W3 67 aa12.33□□□□□ -0.44
RABGGTA-203ENST00000543002 PSG8Q9UQ74 426 aa12.33□□□□□ -0.44
RABGGTA-203ENST00000543002 ZNF705GA8MUZ8 300 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-203ENST00000543002 ZNF324O75467 553 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-203ENST00000543002 FLI1Q01543 452 aaPredicted RBP12.32□□□□□ -0.44
RABGGTA-203ENST00000543002 TVP23CQ96ET8 276 aa12.32□□□□□ -0.44
RABGGTA-203ENST00000543002 LOC102723971A0A1B0GUV8 181 aa12.31□□□□□ -0.44
RABGGTA-203ENST00000543002 TMEM189A5PLL7 270 aa12.31□□□□□ -0.44
RABGGTA-203ENST00000543002 LINC00479Q96M42 142 aa12.31□□□□□ -0.44
RABGGTA-203ENST00000543002 NDFIP1Q9BT67 221 aa12.31□□□□□ -0.44
RABGGTA-203ENST00000543002 TREM1Q9NP99 234 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms