RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 SIGLEC15Q6ZMC9 328 aa6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 C1orf229Q6ZS94 237 aaPredicted RBP6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 RITA1Q96K30 269 aa6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 PIMREGQ9BSJ6 248 aa6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 KLF12Q9Y4X4 402 aa6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 USP34Q70CQ2 3546 aa6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 TMEM8BA6NDV4 472 aa6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 GP9P14770 177 aa6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 PAX1P15863 534 aa6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 OCIAD2Q56VL3 154 aa6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 PAPPA-AS1Q5QFB9 102 aa6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 PRSS57Q6UWY2 283 aa6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 NPIPB6E9PJ23 425 aa6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 IGLV2-8P01709 118 aa6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 COX6CP09669 75 aa6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 LGALS9BQ3B8N2 356 aa6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 PRR30Q53SZ7 412 aaPredicted RBP6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 LGALS9CQ6DKI2 356 aa6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 LINC00173Q6ZV60 143 aa6.51□□□□□ -1.37
PRKAB1-207ENST00000542698 NDPQ00604 133 aa6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 FAM120AOSQ5T036 256 aa6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 SFTA2Q6UW10 78 aa6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 GTSF1Q8WW33 167 aa6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 CYSLTR1Q9Y271 337 aa6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 CHTOPQ9Y3Y2 248 aaKnown RBP6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 CCL25O15444 150 aa6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 TMEM219Q86XT9 240 aa6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 C7orf69Q9H7B7 122 aa6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 ZNF256Q9Y2P7 627 aaPredicted RBP6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 EYSQ5T1H1 3165 aa6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 TRAV41A0A0B4J266 112 aa6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 OVOL1O14753 267 aa6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 CD7P09564 240 aa6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 ARL6IP6Q8N6S5 226 aa6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 PRSS33Q8NF86 280 aa6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 ZNF418Q8TF45 676 aaPredicted RBP6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 JMJD8Q96S16 334 aa6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 TP53TG3Q9ULZ0 132 aa6.5□□□□□ -1.37
PRKAB1-207ENST00000542698 TRBV7-1A0A0A6YYK4 115 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 HOXA3O43365 443 aaPredicted RBP6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 TNRC6AQ8NDV7 1962 aaKnown RBP6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 C2CD3Q4AC94 2353 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 TRAV40A0A0B4J280 105 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 ZNF815PA8K554 130 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 H3BRM9 83 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 NPYP01303 97 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 NBL1P41271 181 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 C9orf139Q6ZV77 190 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 Q8N7P7 452 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 NPFFR1Q9GZQ6 430 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 COL4A2P08572 1712 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 PLNP26678 52 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 DEFB125Q8N687 156 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 RNF182Q8N6D2 247 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 DYNLRB2Q8TF09 96 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 LINC00477Q96M19 166 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 LINC00574Q9H8X3 128 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 PTPN13Q12923 2485 aa6.49□□□□□ -1.37
PRKAB1-207ENST00000542698 I3L2K1 104 aa6.48□□□□□ -1.37
PRKAB1-207ENST00000542698 IGLV2-23P01705 113 aa6.48□□□□□ -1.37
PRKAB1-207ENST00000542698 EFNA4P52798 201 aa6.48□□□□□ -1.37
PRKAB1-207ENST00000542698 CD300EQ496F6 205 aaPredicted RBP6.48□□□□□ -1.37
PRKAB1-207ENST00000542698 VGLL1Q99990 258 aa6.48□□□□□ -1.37
PRKAB1-207ENST00000542698 IGKV1D-37A0A075B6S9 117 aa6.48□□□□□ -1.37
PRKAB1-207ENST00000542698 C9orf118A6NHY6 69 aa6.48□□□□□ -1.37
PRKAB1-207ENST00000542698 SHISA9B4DS77 424 aa6.48□□□□□ -1.37
PRKAB1-207ENST00000542698 H7C1H1 209 aa6.48□□□□□ -1.37
PRKAB1-207ENST00000542698 K7EIM0 57 aa6.48□□□□□ -1.37
PRKAB1-207ENST00000542698 C14orf178Q8N769 122 aaPredicted RBP6.48□□□□□ -1.37
PRKAB1-207ENST00000542698 CHAC1Q9BUX1 264 aa6.48□□□□□ -1.37
PRKAB1-207ENST00000542698 CRYGCP07315 174 aa6.48□□□□□ -1.37
PRKAB1-207ENST00000542698 SAA4P35542 130 aa6.48□□□□□ -1.37
PRKAB1-207ENST00000542698 GAGE13Q4V321 117 aa6.48□□□□□ -1.37
PRKAB1-207ENST00000542698 SP5Q6BEB4 398 aaPredicted RBP6.48□□□□□ -1.37
PRKAB1-207ENST00000542698 MOB4Q9Y3A3 225 aa6.48□□□□□ -1.37
PRKAB1-207ENST00000542698 C2orf70A6NJV1 201 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 SRD5A1P18405 259 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 SAMD13Q5VXD3 122 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 DPH3P1Q9H4G8 78 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 WNK1Q9H4A3 2382 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 EXPH5Q8NEV8 1989 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 IGHV2-70DA0A0C4DH43 119 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 ATP6V0E1O15342 81 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 IGLV1-47P01700 117 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 EGR2P11161 476 aaPredicted RBP6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 SIGMAR1Q99720 223 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 BEX4Q9NWD9 120 aaPredicted RBP6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 SORL1Q92673 2214 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 G3V318 75 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 NDUFS7O75251 213 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 LINC01545Q5VT33 79 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 IL17RELQ6ZVW7 336 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 FAM110DQ8TAY7 271 aaPredicted RBP6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 GEMIN7Q9H840 131 aaKnown RBP6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 C19orf71A6NCJ1 209 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 LINC01549A6NIU2 74 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 NPFFO15130 113 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 MBD6Q96DN6 1003 aa6.47□□□□□ -1.37
PRKAB1-207ENST00000542698 ATRXP46100 2492 aa6.46□□□□□ -1.37
PRKAB1-207ENST00000542698 A0A1B0GV72 72 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms