RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 STAB2Q8WWQ8 2551 aa14.09□□□□□ -0.15
DDX55-207ENST00000540763 IGKV2-40A0A087WW87 121 aaPredicted RBP14.09□□□□□ -0.15
DDX55-207ENST00000540763 SMIM9A6NGZ8 99 aa14.09□□□□□ -0.15
DDX55-207ENST00000540763 IGKV2D-40P01614 121 aaPredicted RBP14.09□□□□□ -0.15
DDX55-207ENST00000540763 CT45A10P0DMU9 189 aa14.09□□□□□ -0.15
DDX55-207ENST00000540763 LEPP41159 167 aa14.09□□□□□ -0.15
DDX55-207ENST00000540763 FGF8P55075 233 aaPredicted RBP14.09□□□□□ -0.15
DDX55-207ENST00000540763 IQCF2Q8IXL9 164 aa14.09□□□□□ -0.15
DDX55-207ENST00000540763 FAM19A4Q96LR4 140 aa14.09□□□□□ -0.15
DDX55-207ENST00000540763 AGPAT4-IT1Q9H0P7 198 aa14.09□□□□□ -0.15
DDX55-207ENST00000540763 X6R8D5 127 aa14.09□□□□□ -0.15
DDX55-207ENST00000540763 GGTLC3B5MD39 225 aa14.08□□□□□ -0.16
DDX55-207ENST00000540763 NMBP08949 121 aa14.08□□□□□ -0.16
DDX55-207ENST00000540763 H2AFB1P0C5Y9 115 aa14.08□□□□□ -0.16
DDX55-207ENST00000540763 PRB4P10163 310 aaPredicted RBP14.08□□□□□ -0.16
DDX55-207ENST00000540763 NKX2-5P52952 324 aaPredicted RBP14.08□□□□□ -0.16
DDX55-207ENST00000540763 ERCC8Q13216 396 aa14.08□□□□□ -0.16
DDX55-207ENST00000540763 TMEM256Q8N2U0 113 aa14.08□□□□□ -0.16
DDX55-207ENST00000540763 Q8NAQ8 132 aa14.08□□□□□ -0.16
DDX55-207ENST00000540763 SFT2D1Q8WV19 159 aa14.08□□□□□ -0.16
DDX55-207ENST00000540763 ZNF492Q9P255 531 aa14.08□□□□□ -0.16
DDX55-207ENST00000540763 LENEPQ9Y5L5 61 aa14.08□□□□□ -0.16
DDX55-207ENST00000540763 CRISP2P16562 243 aa14.07□□□□□ -0.16
DDX55-207ENST00000540763 C1orf158Q8N1D5 194 aa14.07□□□□□ -0.16
DDX55-207ENST00000540763 VGLL1Q99990 258 aa14.07□□□□□ -0.16
DDX55-207ENST00000540763 TMPRSS5Q9H3S3 457 aa14.07□□□□□ -0.16
DDX55-207ENST00000540763 TRAV1-1A0A0B4J248 108 aa14.06□□□□□ -0.16
DDX55-207ENST00000540763 KLLNB2CW77 178 aa14.06□□□□□ -0.16
DDX55-207ENST00000540763 PPT1P50897 306 aa14.06□□□□□ -0.16
DDX55-207ENST00000540763 ZNF138P52744 262 aa14.06□□□□□ -0.16
DDX55-207ENST00000540763 TCEAL7Q9BRU2 100 aa14.06□□□□□ -0.16
DDX55-207ENST00000540763 TRAV12-2A0A075B6T6 113 aa14.05□□□□□ -0.16
DDX55-207ENST00000540763 A0A0J9YWU9 116 aa14.05□□□□□ -0.16
DDX55-207ENST00000540763 FAM74A7A6NL05 159 aa14.05□□□□□ -0.16
DDX55-207ENST00000540763 TEX46H3BTG2 121 aa14.05□□□□□ -0.16
DDX55-207ENST00000540763 K7EQM0 130 aa14.05□□□□□ -0.16
DDX55-207ENST00000540763 TCRAP04437 139 aa14.05□□□□□ -0.16
DDX55-207ENST00000540763 SUMO1P63165 101 aaKnown RBP14.05□□□□□ -0.16
DDX55-207ENST00000540763 YTHDF2Q9Y5A9 579 aaKnown RBP14.05□□□□□ -0.16
DDX55-207ENST00000540763 IGHV4-28A0A0C4DH34 117 aa14.04□□□□□ -0.16
DDX55-207ENST00000540763 FBLL1A6NHQ2 334 aaKnown RBP14.04□□□□□ -0.16
DDX55-207ENST00000540763 HBE1P02100 147 aa14.04□□□□□ -0.16
DDX55-207ENST00000540763 GFI1BQ5VTD9 330 aa14.04□□□□□ -0.16
DDX55-207ENST00000540763 GOLT1AQ6ZVE7 132 aa14.04□□□□□ -0.16
DDX55-207ENST00000540763 IL17DQ8TAD2 202 aa14.04□□□□□ -0.16
DDX55-207ENST00000540763 ATG101Q9BSB4 218 aa14.04□□□□□ -0.16
DDX55-207ENST00000540763 TMEM208Q9BTX3 173 aa14.04□□□□□ -0.16
DDX55-207ENST00000540763 EPDR1Q9UM22 224 aa14.04□□□□□ -0.16
DDX55-207ENST00000540763 TMEM189A5PLL7 270 aa14.03□□□□□ -0.16
DDX55-207ENST00000540763 UBE2G2P60604 165 aa14.03□□□□□ -0.16
DDX55-207ENST00000540763 RPH3ALQ9UNE2 315 aa14.03□□□□□ -0.16
DDX55-207ENST00000540763 IGHV3OR16-12A0A075B7B8 117 aa14.02□□□□□ -0.17
DDX55-207ENST00000540763 RBMY1A1P0DJD3 496 aaKnown RBP14.02□□□□□ -0.17
DDX55-207ENST00000540763 RBMY1CP0DJD4 496 aa14.02□□□□□ -0.17
DDX55-207ENST00000540763 GNG5P63218 68 aa14.02□□□□□ -0.17
DDX55-207ENST00000540763 RBMY1FQ15415 496 aaKnown RBP14.02□□□□□ -0.17
DDX55-207ENST00000540763 ZFAND2AQ8N6M9 145 aa14.02□□□□□ -0.17
DDX55-207ENST00000540763 CYB561D1Q8N8Q1 229 aa14.02□□□□□ -0.17
DDX55-207ENST00000540763 HIST1H2BAQ96A08 127 aa14.02□□□□□ -0.17
DDX55-207ENST00000540763 C7orf71A4D174 169 aa14.01□□□□□ -0.17
DDX55-207ENST00000540763 H7BYZ3 331 aa14.01□□□□□ -0.17
DDX55-207ENST00000540763 RRN3P1Q2M238 152 aa14.01□□□□□ -0.17
DDX55-207ENST00000540763 CCDC28AQ8IWP9 274 aa14.01□□□□□ -0.17
DDX55-207ENST00000540763 TMEM75Q8N9X5 138 aa14.01□□□□□ -0.17
DDX55-207ENST00000540763 Q8TAT8 98 aa14.01□□□□□ -0.17
DDX55-207ENST00000540763 MUC7Q8TAX7 377 aa14.01□□□□□ -0.17
DDX55-207ENST00000540763 MANBALQ9NQG1 85 aa14.01□□□□□ -0.17
DDX55-207ENST00000540763 GPX1P07203 203 aa14□□□□□ -0.17
DDX55-207ENST00000540763 TAS2R60P59551 318 aa14□□□□□ -0.17
DDX55-207ENST00000540763 KIR3DS1Q14943 382 aa14□□□□□ -0.17
DDX55-207ENST00000540763 ALKAL2Q6UX46 152 aa14□□□□□ -0.17
DDX55-207ENST00000540763 NIPSNAP3BQ9BS92 247 aa14□□□□□ -0.17
DDX55-207ENST00000540763 BOLA1Q9Y3E2 137 aa14□□□□□ -0.17
DDX55-207ENST00000540763 F6UZH7 168 aa13.99□□□□□ -0.17
DDX55-207ENST00000540763 IFNA7P01567 189 aa13.99□□□□□ -0.17
DDX55-207ENST00000540763 PMS2P11Q13670 270 aa13.99□□□□□ -0.17
DDX55-207ENST00000540763 LINC01587Q99440 93 aa13.99□□□□□ -0.17
DDX55-207ENST00000540763 PYGO2Q9BRQ0 406 aa13.99□□□□□ -0.17
DDX55-207ENST00000540763 DNAH7Q8WXX0 4024 aa13.98□□□□□ -0.17
DDX55-207ENST00000540763 TEX48A0A1B0GUV7 120 aa13.98□□□□□ -0.17
DDX55-207ENST00000540763 C3orf84H3BNL1 204 aa13.98□□□□□ -0.17
DDX55-207ENST00000540763 PEX7O00628 323 aa13.98□□□□□ -0.17
DDX55-207ENST00000540763 PAGE4O60829 102 aa13.98□□□□□ -0.17
DDX55-207ENST00000540763 CST9LP1Q5W188 147 aa13.98□□□□□ -0.17
DDX55-207ENST00000540763 TXNDC17Q9BRA2 123 aa13.98□□□□□ -0.17
DDX55-207ENST00000540763 LINC00467Q9BRT7 94 aa13.98□□□□□ -0.17
DDX55-207ENST00000540763 NDFIP1Q9BT67 221 aa13.98□□□□□ -0.17
DDX55-207ENST00000540763 RYR3Q15413 4870 aa13.98□□□□□ -0.17
DDX55-207ENST00000540763 TRAV8-1A0A0A6YYK1 113 aa13.97□□□□□ -0.17
DDX55-207ENST00000540763 TRAV12-3A0A0B4J271 114 aa13.97□□□□□ -0.17
DDX55-207ENST00000540763 LOC102723971A0A1B0GUV8 181 aa13.97□□□□□ -0.17
DDX55-207ENST00000540763 A0A1B0GV50 99 aa13.97□□□□□ -0.17
DDX55-207ENST00000540763 J3KRW8 73 aa13.97□□□□□ -0.17
DDX55-207ENST00000540763 ZNF324O75467 553 aaPredicted RBP13.97□□□□□ -0.17
DDX55-207ENST00000540763 IGLV2-11P01706 119 aa13.97□□□□□ -0.17
DDX55-207ENST00000540763 BLOC1S1P78537 153 aa13.97□□□□□ -0.17
DDX55-207ENST00000540763 FLI1Q01543 452 aaPredicted RBP13.97□□□□□ -0.17
DDX55-207ENST00000540763 BTN1A1Q13410 526 aa13.97□□□□□ -0.17
DDX55-207ENST00000540763 Q6AWC8 147 aa13.97□□□□□ -0.17
DDX55-207ENST00000540763 DEFB4AO15263 64 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms