RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 PDCD11Q14690 1871 aaKnown RBP8.02□□□□□ -1.13
COL4A6-208ENST00000538570 CD59P13987 128 aa8.02□□□□□ -1.13
COL4A6-208ENST00000538570 DEFB131AP59861 70 aa8.02□□□□□ -1.13
COL4A6-208ENST00000538570 MPLKIPQ8TAP9 179 aa8.02□□□□□ -1.13
COL4A6-208ENST00000538570 TRBV25-1A0A075B6N4 114 aa8.02□□□□□ -1.13
COL4A6-208ENST00000538570 OVOL3O00110 214 aa8.02□□□□□ -1.13
COL4A6-208ENST00000538570 IGHG2P01859 326 aa8.02□□□□□ -1.13
COL4A6-208ENST00000538570 C8orf49Q96NF6 230 aa8.02□□□□□ -1.13
COL4A6-208ENST00000538570 ARHGEF17Q96PE2 2063 aaPredicted RBP8.02□□□□□ -1.13
COL4A6-208ENST00000538570 CFHR2P36980 270 aa8.02□□□□□ -1.13
COL4A6-208ENST00000538570 LYPD2Q6UXB3 125 aa8.02□□□□□ -1.13
COL4A6-208ENST00000538570 RNF114Q9Y508 228 aa8.02□□□□□ -1.13
COL4A6-208ENST00000538570 CLPSP04118 112 aa8.02□□□□□ -1.13
COL4A6-208ENST00000538570 DEFB125Q8N687 156 aa8.02□□□□□ -1.13
COL4A6-208ENST00000538570 WFDC9Q8NEX5 89 aa8.02□□□□□ -1.13
COL4A6-208ENST00000538570 A0A1W2PPI3 338 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 CLPSL1A2RUU4 121 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 SLC25A16P16260 332 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 RNF144BQ7Z419 303 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 LINC01356Q8N9X3 169 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 ALPK2Q86TB3 2170 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 F5H768 121 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 C2orf66Q6UXQ4 117 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 ZNF318Q5VUA4 2279 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 CACNA1DQ01668 2161 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 NYNRINQ9P2P1 1898 aaKnown RBP8.01□□□□□ -1.13
COL4A6-208ENST00000538570 TRAV12-2A0A075B6T6 113 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 FAM240AA0A1B0GVK7 77 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 SAA4P35542 130 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 FAM104BQ5XKR9 115 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 NKAPP1Q8N9T2 125 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 KIR2DL5BA0A0G2JN68 375 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 KIR2DL5BA0A0G2JPC4 375 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 NDUFB8O95169 186 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 KIR2DL5AQ8N109 375 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 ZNF581Q9P0T4 197 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 IGKV1-16P04430 117 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 COL8A2P25067 703 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 ABCA7Q8IZY2 2146 aa8.01□□□□□ -1.13
COL4A6-208ENST00000538570 Q0VFX4 171 aa8□□□□□ -1.13
COL4A6-208ENST00000538570 Q6ZRM9 215 aa8□□□□□ -1.13
COL4A6-208ENST00000538570 KLF5Q13887 457 aaPredicted RBP8□□□□□ -1.13
COL4A6-208ENST00000538570 MBD3L4A6NDZ8 208 aaPredicted RBP8□□□□□ -1.13
COL4A6-208ENST00000538570 MBD3L3A6NE82 208 aaPredicted RBP8□□□□□ -1.13
COL4A6-208ENST00000538570 MBD3L5A6NJ08 208 aaPredicted RBP8□□□□□ -1.13
COL4A6-208ENST00000538570 PFN2P35080 140 aa8□□□□□ -1.13
COL4A6-208ENST00000538570 MBD3L2Q8NHZ7 208 aaPredicted RBP8□□□□□ -1.13
COL4A6-208ENST00000538570 HS3ST6Q96QI5 342 aa8□□□□□ -1.13
COL4A6-208ENST00000538570 KIF26BQ2KJY2 2108 aa8□□□□□ -1.13
COL4A6-208ENST00000538570 ACYP1P07311 99 aa8□□□□□ -1.13
COL4A6-208ENST00000538570 YPEL3P61236 119 aaPredicted RBP8□□□□□ -1.13
COL4A6-208ENST00000538570 MDS2Q8NDY4 140 aa8□□□□□ -1.13
COL4A6-208ENST00000538570 FAM110DQ8TAY7 271 aaPredicted RBP8□□□□□ -1.13
COL4A6-208ENST00000538570 GNLYP22749 145 aa8□□□□□ -1.13
COL4A6-208ENST00000538570 LGALS9BQ3B8N2 356 aa7.99□□□□□ -1.13
COL4A6-208ENST00000538570 LGALS9CQ6DKI2 356 aa7.99□□□□□ -1.13
COL4A6-208ENST00000538570 C12orf74Q32Q52 190 aa7.99□□□□□ -1.13
COL4A6-208ENST00000538570 PRO1854Q9UHT4 67 aa7.99□□□□□ -1.13
COL4A6-208ENST00000538570 LTBP1Q14766 1721 aa7.99□□□□□ -1.13
COL4A6-208ENST00000538570 IGHV3-16A0A0C4DH30 117 aa7.99□□□□□ -1.13
COL4A6-208ENST00000538570 TAL2Q16559 108 aa7.99□□□□□ -1.13
COL4A6-208ENST00000538570 SPINK13Q1W4C9 94 aa7.99□□□□□ -1.13
COL4A6-208ENST00000538570 WFDC11Q8NEX6 87 aa7.99□□□□□ -1.13
COL4A6-208ENST00000538570 CFHR3Q02985 330 aa7.98□□□□□ -1.13
COL4A6-208ENST00000538570 THAP8Q8NA92 274 aa7.98□□□□□ -1.13
COL4A6-208ENST00000538570 XCL2Q9UBD3 114 aa7.98□□□□□ -1.13
COL4A6-208ENST00000538570 TRAV25A0A0B4J276 109 aa7.98□□□□□ -1.13
COL4A6-208ENST00000538570 FOXL2NBQ6ZUU3 175 aa7.98□□□□□ -1.13
COL4A6-208ENST00000538570 BPESC1Q9GZL8 116 aa7.98□□□□□ -1.13
COL4A6-208ENST00000538570 KLK9Q9UKQ9 250 aa7.98□□□□□ -1.13
COL4A6-208ENST00000538570 IGLC1P0CG04 106 aa7.98□□□□□ -1.13
COL4A6-208ENST00000538570 MRPL51Q4U2R6 128 aaKnown RBP7.98□□□□□ -1.13
COL4A6-208ENST00000538570 DSCR8Q96T75 97 aa7.98□□□□□ -1.13
COL4A6-208ENST00000538570 TMEM14BQ9NUH8 114 aa7.98□□□□□ -1.13
COL4A6-208ENST00000538570 LINC01619G3V211 115 aa7.98□□□□□ -1.13
COL4A6-208ENST00000538570 ATP6V0E1O15342 81 aa7.98□□□□□ -1.13
COL4A6-208ENST00000538570 IGHG3P01860 377 aa7.98□□□□□ -1.13
COL4A6-208ENST00000538570 NDUFV3P56181 108 aaKnown RBP7.98□□□□□ -1.13
COL4A6-208ENST00000538570 B3GALT5-AS1P59052 145 aa7.98□□□□□ -1.13
COL4A6-208ENST00000538570 FOXI1Q12951 378 aa7.98□□□□□ -1.13
COL4A6-208ENST00000538570 VWC2Q2TAL6 325 aa7.97□□□□□ -1.13
COL4A6-208ENST00000538570 TRBV19A0A075B6N1 114 aa7.97□□□□□ -1.13
COL4A6-208ENST00000538570 TINCRA0A1B0GVN0 87 aa7.97□□□□□ -1.13
COL4A6-208ENST00000538570 RIF1Q5UIP0 2472 aaKnown RBP7.97□□□□□ -1.13
COL4A6-208ENST00000538570 SCRT2Q9NQ03 307 aa7.97□□□□□ -1.13
COL4A6-208ENST00000538570 A0A0G2JMZ2 1700 aa7.97□□□□□ -1.13
COL4A6-208ENST00000538570 LRRC37A2A6NM11 1700 aa7.97□□□□□ -1.13
COL4A6-208ENST00000538570 IGHV1OR15-1A0A075B7D0 117 aa7.97□□□□□ -1.13
COL4A6-208ENST00000538570 CRLF1O75462 422 aa7.97□□□□□ -1.13
COL4A6-208ENST00000538570 WFDC2Q14508 124 aa7.97□□□□□ -1.13
COL4A6-208ENST00000538570 C17orf82Q86X59 251 aaPredicted RBP7.97□□□□□ -1.13
COL4A6-208ENST00000538570 CYYR1Q96J86 154 aa7.97□□□□□ -1.13
COL4A6-208ENST00000538570 NDUFA4L2Q9NRX3 87 aa7.97□□□□□ -1.13
COL4A6-208ENST00000538570 SIGLEC8Q9NYZ4 499 aa7.97□□□□□ -1.13
COL4A6-208ENST00000538570 NCOR1O75376 2440 aa7.97□□□□□ -1.13
COL4A6-208ENST00000538570 SDHAF1A6NFY7 115 aa7.96□□□□□ -1.13
COL4A6-208ENST00000538570 HLA-DMBP28068 263 aa7.96□□□□□ -1.13
COL4A6-208ENST00000538570 UBE2E1P51965 193 aa7.96□□□□□ -1.13
COL4A6-208ENST00000538570 RUSC1-AS1Q66K80 236 aa7.96□□□□□ -1.13
COL4A6-208ENST00000538570 GREB1Q4ZG55 1949 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms