RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 PARLQ9H300 379 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 VSIRQ9H7M9 311 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 KCNIP2Q9NS61 270 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 KLK9Q9UKQ9 250 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 FUT9Q9Y231 359 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 VPS13CQ709C8 3753 aa3.29□□□□□ -1.88
SNHG1-208ENST00000538266 IGHV3-35A0A0C4DH35 117 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 C11orf94C9JXX5 98 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 M0R143 59 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 OVOL1O14753 267 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 SNRPCP09234 159 aaKnown RBP3.28□□□□□ -1.88
SNHG1-208ENST00000538266 OR10J1P30954 320 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 FCGR2BP31994 310 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-208ENST00000538266 BMI1P35226 326 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 CDC34P49427 236 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-208ENST00000538266 CNN1P51911 297 aaKnown RBP3.28□□□□□ -1.88
SNHG1-208ENST00000538266 SYNJ2BPP57105 145 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 RANP62826 216 aaKnown RBP3.28□□□□□ -1.88
SNHG1-208ENST00000538266 ARL16Q0P5N6 197 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 RAB31Q13636 194 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 VWC2Q2TAL6 325 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 C1orf194Q5T5A4 169 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 PVRIGQ6DKI7 326 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 ZNF664Q8N3J9 261 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 GBGT1Q8N5D6 347 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 TMEM116Q8NCL8 245 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 OR10G9Q8NGN4 311 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 OR10G7Q8NGN6 311 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 OR9G4Q8NGQ1 327 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 TXNDC17Q9BRA2 123 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 NPCDR1Q9BY65 106 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 FNDC4Q9H6D8 234 aaPredicted RBP3.28□□□□□ -1.88
SNHG1-208ENST00000538266 DAZ1Q9NQZ3 744 aaKnown RBP3.28□□□□□ -1.88
SNHG1-208ENST00000538266 NAGKQ9UJ70 344 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 UFC1Q9Y3C8 167 aa3.28□□□□□ -1.88
SNHG1-208ENST00000538266 AKAP9Q99996 3911 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 CBY3A6NI87 242 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 FNDC10F2Z333 226 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 LGALS9O00182 355 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 NDUFA4O00483 81 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 PAGE4O60829 102 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 MPDU1O75352 247 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 SAP30O75446 220 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 SCGB1D1O95968 90 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 PRSS2P07478 247 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 CTSGP08311 255 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 IGLC1P0CG04 106 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 S100A7P31151 101 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 NANOS2P60321 138 aaKnown RBP3.27□□□□□ -1.89
SNHG1-208ENST00000538266 ERVFC1-1P60608 527 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 YPEL3P61236 119 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-208ENST00000538266 KLF5Q13887 457 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-208ENST00000538266 TMEM183BQ1AE95 376 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 TIGITQ495A1 244 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 FAM78BQ5VT40 261 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 TMEM144Q7Z5S9 345 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 LINC01551Q86U37 167 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 GPHB5Q86YW7 130 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 RPP25LQ8N5L8 163 aaKnown RBP3.27□□□□□ -1.89
SNHG1-208ENST00000538266 CMTM2Q8TAZ6 248 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 DYNLRB2Q8TF09 96 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 TMEM37Q8WXS4 190 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 TMEM190Q8WZ59 177 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 DLX4Q92988 240 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-208ENST00000538266 METTL26Q96S19 204 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 TRGV9Q99603 122 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 CHRDL1Q9BU40 450 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 TRAPPC1Q9Y5R8 145 aa3.27□□□□□ -1.89
SNHG1-208ENST00000538266 COL6A5A8TX70 2615 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 IGKV2D-30A0A075B6S6 120 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 IGHV3OR16-8A0A075B7F1 116 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 IGHV4-28A0A0C4DH34 117 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 A0A1W2PPV4 95 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 PMS2P5A8MQ11 134 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 ZNF705FA8MVS1 300 aaPredicted RBP3.26□□□□□ -1.89
SNHG1-208ENST00000538266 PRSS46E5RG02 174 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 IGKV1-17P01599 117 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 IL4P05112 153 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 ZNF705DP0CH99 300 aaPredicted RBP3.26□□□□□ -1.89
SNHG1-208ENST00000538266 ZNF705BP0CI00 300 aaPredicted RBP3.26□□□□□ -1.89
SNHG1-208ENST00000538266 IGLL1P15814 213 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 NPPCP23582 126 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 INSL3P51460 131 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 LYZP61626 148 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 SELENOTP62341 195 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 PAFAH1B2P68402 229 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 RPL19P84098 196 aaKnown RBP3.26□□□□□ -1.89
SNHG1-208ENST00000538266 C9orf66Q5T8R8 295 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 CST9LP1Q5W188 147 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 TOMM20LQ6UXN7 152 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 UNQ9165/PRO28630Q6UXU0 137 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 TEX43Q6ZNM6 134 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 S100A7AQ86SG5 101 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 SFRP2Q96HF1 295 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 GRAMD2BQ96HH9 432 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 ZNF479Q96JC4 524 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 C20orf144Q9BQM9 153 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 SNHG12Q9BXW3 62 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 NPVFQ9HCQ7 196 aa3.26□□□□□ -1.89
SNHG1-208ENST00000538266 MRPL36Q9P0J6 103 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms