RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 CDC34P49427 236 aaPredicted RBP12.33□□□□□ -0.44
GPN3-202ENST00000537466 PQLC2Q6ZP29 291 aa12.33□□□□□ -0.44
GPN3-202ENST00000537466 LYPD1Q8N2G4 141 aa12.33□□□□□ -0.44
GPN3-202ENST00000537466 LINC00477Q96M19 166 aa12.33□□□□□ -0.44
GPN3-202ENST00000537466 C20orf144Q9BQM9 153 aa12.33□□□□□ -0.44
GPN3-202ENST00000537466 NIPSNAP3BQ9BS92 247 aa12.33□□□□□ -0.44
GPN3-202ENST00000537466 TRAV12-3A0A0B4J271 114 aa12.32□□□□□ -0.44
GPN3-202ENST00000537466 H7BYZ3 331 aa12.32□□□□□ -0.44
GPN3-202ENST00000537466 SERF2P84101 59 aa12.32□□□□□ -0.44
GPN3-202ENST00000537466 APLNQ9ULZ1 77 aa12.32□□□□□ -0.44
GPN3-202ENST00000537466 BORCS7-ASMTA0A0B4J1R7 106 aa12.31□□□□□ -0.44
GPN3-202ENST00000537466 TEX48A0A1B0GUV7 120 aa12.31□□□□□ -0.44
GPN3-202ENST00000537466 STAG3L2P0CL84 134 aa12.31□□□□□ -0.44
GPN3-202ENST00000537466 STAG3L3P0CL85 134 aa12.31□□□□□ -0.44
GPN3-202ENST00000537466 ARL14EPLP0DKL9 152 aa12.31□□□□□ -0.44
GPN3-202ENST00000537466 RAB24Q969Q5 203 aa12.31□□□□□ -0.44
GPN3-202ENST00000537466 IGHV4-4A0A075B6R2 117 aa12.3□□□□□ -0.44
GPN3-202ENST00000537466 KLLNB2CW77 178 aa12.3□□□□□ -0.44
GPN3-202ENST00000537466 CD300CQ08708 224 aa12.3□□□□□ -0.44
GPN3-202ENST00000537466 BTN1A1Q13410 526 aa12.3□□□□□ -0.44
GPN3-202ENST00000537466 TMEM78Q5T7P6 136 aa12.3□□□□□ -0.44
GPN3-202ENST00000537466 SSX7Q7RTT5 188 aa12.3□□□□□ -0.44
GPN3-202ENST00000537466 OR11H4Q8NGC9 324 aa12.3□□□□□ -0.44
GPN3-202ENST00000537466 Q8TAT8 98 aa12.3□□□□□ -0.44
GPN3-202ENST00000537466 RNASE8Q8TDE3 154 aaKnown RBP12.3□□□□□ -0.44
GPN3-202ENST00000537466 GNPNAT1Q96EK6 184 aaPredicted RBP12.3□□□□□ -0.44
GPN3-202ENST00000537466 C16orf74Q96GX8 76 aa12.3□□□□□ -0.44
GPN3-202ENST00000537466 CYTL1Q9NRR1 136 aa12.3□□□□□ -0.44
GPN3-202ENST00000537466 ZNF492Q9P255 531 aa12.3□□□□□ -0.44
GPN3-202ENST00000537466 C7orf71A4D174 169 aa12.29□□□□□ -0.44
GPN3-202ENST00000537466 PGPA6NDG6 321 aa12.29□□□□□ -0.44
GPN3-202ENST00000537466 MBP02144 154 aa12.29□□□□□ -0.44
GPN3-202ENST00000537466 SLC25A5P05141 298 aaKnown RBP12.29□□□□□ -0.44
GPN3-202ENST00000537466 CRISP2P16562 243 aa12.29□□□□□ -0.44
GPN3-202ENST00000537466 CSN1S1P47710 185 aa12.29□□□□□ -0.44
GPN3-202ENST00000537466 DAD1P61803 113 aa12.29□□□□□ -0.44
GPN3-202ENST00000537466 PRR9Q5T870 116 aa12.29□□□□□ -0.44
GPN3-202ENST00000537466 HYLS1Q96M11 299 aa12.29□□□□□ -0.44
GPN3-202ENST00000537466 OTORQ9NRC9 128 aa12.29□□□□□ -0.44
GPN3-202ENST00000537466 LYRM9A8MSI8 78 aa12.28□□□□□ -0.44
GPN3-202ENST00000537466 DIRC3C9JPN6 131 aa12.28□□□□□ -0.44
GPN3-202ENST00000537466 TCTAP57738 103 aa12.28□□□□□ -0.44
GPN3-202ENST00000537466 ZFAND2AQ8N6M9 145 aa12.28□□□□□ -0.44
GPN3-202ENST00000537466 TMEM263Q8WUH6 116 aaKnown RBP12.28□□□□□ -0.44
GPN3-202ENST00000537466 RBAKDNA6NC62 111 aa12.27□□□□□ -0.44
GPN3-202ENST00000537466 TAAR5O14804 337 aa12.27□□□□□ -0.44
GPN3-202ENST00000537466 ZNF324O75467 553 aaPredicted RBP12.27□□□□□ -0.44
GPN3-202ENST00000537466 GPX1P07203 203 aa12.27□□□□□ -0.44
GPN3-202ENST00000537466 HTN3P15516 51 aa12.27□□□□□ -0.44
GPN3-202ENST00000537466 RNASE4P34096 147 aaKnown RBP12.27□□□□□ -0.44
GPN3-202ENST00000537466 ZNF138P52744 262 aa12.27□□□□□ -0.44
GPN3-202ENST00000537466 LGALS9CQ6DKI2 356 aa12.27□□□□□ -0.44
GPN3-202ENST00000537466 Q6ZQT7 251 aa12.27□□□□□ -0.44
GPN3-202ENST00000537466 ACTR3CQ9C0K3 210 aaPredicted RBP12.27□□□□□ -0.44
GPN3-202ENST00000537466 RPH3ALQ9UNE2 315 aa12.27□□□□□ -0.44
GPN3-202ENST00000537466 VPS13DQ5THJ4 4388 aa12.27□□□□□ -0.45
GPN3-202ENST00000537466 GCHFRP30047 84 aa12.27□□□□□ -0.45
GPN3-202ENST00000537466 ZNF726P1Q15940 193 aa12.27□□□□□ -0.45
GPN3-202ENST00000537466 ZNF493Q6ZR52 646 aa12.27□□□□□ -0.45
GPN3-202ENST00000537466 SUN5Q8TC36 379 aa12.27□□□□□ -0.45
GPN3-202ENST00000537466 RXFP4Q8TDU9 374 aa12.27□□□□□ -0.45
GPN3-202ENST00000537466 KMT2AQ03164 3969 aa12.26□□□□□ -0.45
GPN3-202ENST00000537466 NMBP08949 121 aa12.26□□□□□ -0.45
GPN3-202ENST00000537466 DEFB130BP0DP73 79 aa12.26□□□□□ -0.45
GPN3-202ENST00000537466 DEFB130AP0DP74 79 aa12.26□□□□□ -0.45
GPN3-202ENST00000537466 ZNF345Q14585 488 aa12.26□□□□□ -0.45
GPN3-202ENST00000537466 KCNRGQ8N5I3 272 aa12.26□□□□□ -0.45
GPN3-202ENST00000537466 PYGO2Q9BRQ0 406 aa12.26□□□□□ -0.45
GPN3-202ENST00000537466 NOP10Q9NPE3 64 aaKnown RBP12.26□□□□□ -0.45
GPN3-202ENST00000537466 TIMM8BQ9Y5J9 83 aaPredicted RBP12.26□□□□□ -0.45
GPN3-202ENST00000537466 HMSDA8MTL9 139 aa12.25□□□□□ -0.45
GPN3-202ENST00000537466 GNG5P63218 68 aa12.25□□□□□ -0.45
GPN3-202ENST00000537466 FAM74A1Q5RGS3 127 aa12.25□□□□□ -0.45
GPN3-202ENST00000537466 CCDC28AQ8IWP9 274 aa12.25□□□□□ -0.45
GPN3-202ENST00000537466 CMTM2Q8TAZ6 248 aa12.25□□□□□ -0.45
GPN3-202ENST00000537466 ARPC5LQ9BPX5 153 aa12.25□□□□□ -0.45
GPN3-202ENST00000537466 CXorf1O96002 111 aa12.24□□□□□ -0.45
GPN3-202ENST00000537466 GOLT1AQ6ZVE7 132 aa12.24□□□□□ -0.45
GPN3-202ENST00000537466 TRBV7-9A0A0J9YWB2 115 aa12.23□□□□□ -0.45
GPN3-202ENST00000537466 AKR1C8PQ5T2L2 129 aa12.23□□□□□ -0.45
GPN3-202ENST00000537466 NDUFAF3Q9BU61 184 aa12.23□□□□□ -0.45
GPN3-202ENST00000537466 CTXND1A0A1B0GTU2 59 aa12.22□□□□□ -0.45
GPN3-202ENST00000537466 IQCF2Q8IXL9 164 aa12.22□□□□□ -0.45
GPN3-202ENST00000537466 ST6GAL2Q96JF0 529 aa12.22□□□□□ -0.45
GPN3-202ENST00000537466 LINC00467Q9BRT7 94 aa12.22□□□□□ -0.45
GPN3-202ENST00000537466 TMEM167BQ9NRX6 74 aa12.22□□□□□ -0.45
GPN3-202ENST00000537466 TRAV8-1A0A0A6YYK1 113 aa12.21□□□□□ -0.45
GPN3-202ENST00000537466 SNURFLB1AK76 121 aa12.21□□□□□ -0.45
GPN3-202ENST00000537466 Q6ZNX1 250 aa12.21□□□□□ -0.45
GPN3-202ENST00000537466 EIF4E3Q8N5X7 224 aaKnown RBP12.21□□□□□ -0.45
GPN3-202ENST00000537466 ARL6IP6Q8N6S5 226 aa12.21□□□□□ -0.45
GPN3-202ENST00000537466 C11orf72Q8NBR9 251 aa12.21□□□□□ -0.45
GPN3-202ENST00000537466 TMED6Q8WW62 240 aa12.21□□□□□ -0.45
GPN3-202ENST00000537466 TMPRSS5Q9H3S3 457 aa12.21□□□□□ -0.45
GPN3-202ENST00000537466 TP53TG3Q9ULZ0 132 aa12.21□□□□□ -0.45
GPN3-202ENST00000537466 A0A0D9SG52 128 aa12.21□□□□□ -0.46
GPN3-202ENST00000537466 CBY3A6NI87 242 aa12.21□□□□□ -0.46
GPN3-202ENST00000537466 GGTLC3B5MD39 225 aa12.21□□□□□ -0.46
GPN3-202ENST00000537466 FGF8P55075 233 aaPredicted RBP12.21□□□□□ -0.46
GPN3-202ENST00000537466 ANXA2RQ3ZCQ2 193 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms