RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 TMEM189A5PLL7 270 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 MBD3L3A6NE82 208 aaPredicted RBP6.14□□□□□ -1.43
CPSF7-216ENST00000536548 SLC25A17O43808 307 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 NCR2O95944 276 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 IGLV2-11P01706 119 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 CD24P25063 80 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 LYZP61626 148 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 CACNG7P62955 275 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 MSMPQ1L6U9 139 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 C10orf55Q5SWW7 151 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 FAM201AQ5SY85 155 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 SAMD5Q5TGI4 173 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 FAM104BQ5XKR9 115 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 VHLLQ6RSH7 139 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 ADAMTSL5Q6ZMM2 481 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 MBD3L2Q8NHZ7 208 aaPredicted RBP6.14□□□□□ -1.43
CPSF7-216ENST00000536548 TNFRSF14Q92956 283 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 RASL11BQ9BPW5 248 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 SIGLEC8Q9NYZ4 499 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 SMPXQ9UHP9 88 aa6.14□□□□□ -1.43
CPSF7-216ENST00000536548 F11RQ9Y624 299 aaKnown RBP6.14□□□□□ -1.43
CPSF7-216ENST00000536548 CMYA5Q8N3K9 4069 aa6.13□□□□□ -1.43
CPSF7-216ENST00000536548 TRBV19A0A075B6N1 114 aa6.13□□□□□ -1.43
CPSF7-216ENST00000536548 D6R8Y8 96 aa6.13□□□□□ -1.43
CPSF7-216ENST00000536548 RNF223E7ERA6 249 aa6.13□□□□□ -1.43
CPSF7-216ENST00000536548 E7EUB6 86 aa6.13□□□□□ -1.43
CPSF7-216ENST00000536548 SNAI2O43623 268 aa6.13□□□□□ -1.43
CPSF7-216ENST00000536548 NDUFB3O43676 98 aa6.13□□□□□ -1.43
CPSF7-216ENST00000536548 ATP5LO75964 103 aa6.13□□□□□ -1.43
CPSF7-216ENST00000536548 IFI27P40305 119 aaPredicted RBP6.13□□□□□ -1.43
CPSF7-216ENST00000536548 PDE6HQ13956 83 aa6.13□□□□□ -1.43
CPSF7-216ENST00000536548 SPRNQ5BIV9 151 aa6.13□□□□□ -1.43
CPSF7-216ENST00000536548 DUX4L9Q6RFH8 374 aaPredicted RBP6.13□□□□□ -1.43
CPSF7-216ENST00000536548 RNASE6Q93091 150 aaKnown RBP6.13□□□□□ -1.43
CPSF7-216ENST00000536548 ZC2HC1AQ96GY0 325 aa6.13□□□□□ -1.43
CPSF7-216ENST00000536548 SHANK2-AS3Q9BTD1 123 aa6.13□□□□□ -1.43
CPSF7-216ENST00000536548 MCRIP2Q9BUT9 160 aaKnown RBP6.13□□□□□ -1.43
CPSF7-216ENST00000536548 MAP1LC3AQ9H492 121 aa6.13□□□□□ -1.43
CPSF7-216ENST00000536548 AAMDCQ9H7C9 122 aa6.13□□□□□ -1.43
CPSF7-216ENST00000536548 HILPDAQ9Y5L2 63 aa6.13□□□□□ -1.43
CPSF7-216ENST00000536548 MED12LQ86YW9 2145 aa6.13□□□□□ -1.43
CPSF7-216ENST00000536548 PPIAL4EA0A075B759 164 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 TRAV8-1A0A0A6YYK1 113 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 A0A1B0GV72 72 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 VSTM5A8MXK1 200 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 H3BRN7 92 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 OVOL3O00110 214 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 ENSAO43768 121 aaKnown RBP6.12□□□□□ -1.43
CPSF7-216ENST00000536548 IGHV3-48P01763 117 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 PPIAL4FP0DN26 164 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 S100A7P31151 101 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 BMI1P35226 326 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 NMUP48645 174 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 TAL2Q16559 108 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 TMEM200BQ69YZ2 307 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 HCP5Q6MZN7 132 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 NUP37Q8NFH4 326 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 SIGMAR1Q99720 223 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 CCL19Q99731 98 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 ZNRD1Q9P1U0 126 aa6.12□□□□□ -1.43
CPSF7-216ENST00000536548 TET2Q6N021 2002 aaPredicted RBP6.11□□□□□ -1.43
CPSF7-216ENST00000536548 VWFP04275 2813 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 A0A096LNJ9 63 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 LOC389332A0A1B0GUA5 103 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 LINC01546A6NGU7 62 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 F8W1H4 67 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 H3BTX0 84 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 NDUFS7O75251 213 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 SCGB2A1O75556 95 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 RBP4P02753 201 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 CRYGBP07316 175 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 CCL3L1P16619 93 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 CKS2P33552 79 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 RPL24P83731 157 aaKnown RBP6.11□□□□□ -1.43
CPSF7-216ENST00000536548 MRPL51Q4U2R6 128 aaKnown RBP6.11□□□□□ -1.43
CPSF7-216ENST00000536548 PRR31Q5SQ13 230 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 LYZL1Q6UWQ5 148 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 SIGLEC15Q6ZMC9 328 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 COX8CQ7Z4L0 72 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 EXOC3-AS1Q8N2X6 119 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 RAB37Q96AX2 223 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 RNF5Q99942 180 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 VGLL1Q99990 258 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 TPPP3Q9BW30 176 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 RAB1BQ9H0U4 201 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 UBTD1Q9HAC8 227 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 NXT2Q9NPJ8 142 aaKnown RBP6.11□□□□□ -1.43
CPSF7-216ENST00000536548 INSIG2Q9Y5U4 225 aa6.11□□□□□ -1.43
CPSF7-216ENST00000536548 RAI1Q7Z5J4 1906 aaPredicted RBP6.1□□□□□ -1.43
CPSF7-216ENST00000536548 I3L2K1 104 aa6.1□□□□□ -1.43
CPSF7-216ENST00000536548 EVI2AP22794 236 aa6.1□□□□□ -1.43
CPSF7-216ENST00000536548 GCSHP23434 173 aa6.1□□□□□ -1.43
CPSF7-216ENST00000536548 FCER1GP30273 86 aa6.1□□□□□ -1.43
CPSF7-216ENST00000536548 TWIST1Q15672 202 aa6.1□□□□□ -1.43
CPSF7-216ENST00000536548 C1orf185Q5T7R7 199 aa6.1□□□□□ -1.43
CPSF7-216ENST00000536548 ZNF474Q6S9Z5 364 aaPredicted RBP6.1□□□□□ -1.43
CPSF7-216ENST00000536548 SEM1Q6ZVN7 128 aa6.1□□□□□ -1.43
CPSF7-216ENST00000536548 LHFPL4Q7Z7J7 247 aa6.1□□□□□ -1.43
CPSF7-216ENST00000536548 BCL6BQ8N143 479 aaPredicted RBP6.1□□□□□ -1.43
CPSF7-216ENST00000536548 CHAC1Q9BUX1 264 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms