RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 STAG3L2P0CL84 134 aa15.21■□□□□ 0.03
PKP3-211ENST00000534401 STAG3L3P0CL85 134 aa15.21■□□□□ 0.03
PKP3-211ENST00000534401 RANP62826 216 aaKnown RBP15.21■□□□□ 0.03
PKP3-211ENST00000534401 FAM122CQ6P4D5 195 aa15.21■□□□□ 0.03
PKP3-211ENST00000534401 LINC01587Q99440 93 aa15.21■□□□□ 0.03
PKP3-211ENST00000534401 SH3BGRL3Q9H299 93 aa15.21■□□□□ 0.03
PKP3-211ENST00000534401 Q9H3A6 140 aa15.21■□□□□ 0.03
PKP3-211ENST00000534401 BORCS7-ASMTA0A0B4J1R7 106 aa15.2■□□□□ 0.02
PKP3-211ENST00000534401 EIF3GO75821 320 aaKnown RBP eCLIP15.2■□□□□ 0.02
PKP3-211ENST00000534401 VGLL1Q99990 258 aa15.2■□□□□ 0.02
PKP3-211ENST00000534401 APLNQ9ULZ1 77 aa15.2■□□□□ 0.02
PKP3-211ENST00000534401 IGKV2-40A0A087WW87 121 aaPredicted RBP15.19■□□□□ 0.02
PKP3-211ENST00000534401 HMSDA8MTL9 139 aa15.19■□□□□ 0.02
PKP3-211ENST00000534401 IGKV2D-40P01614 121 aaPredicted RBP15.19■□□□□ 0.02
PKP3-211ENST00000534401 CDC34P49427 236 aaPredicted RBP15.19■□□□□ 0.02
PKP3-211ENST00000534401 EMP1P54849 157 aa15.19■□□□□ 0.02
PKP3-211ENST00000534401 ZNF493Q6ZR52 646 aa15.19■□□□□ 0.02
PKP3-211ENST00000534401 RAB24Q969Q5 203 aa15.19■□□□□ 0.02
PKP3-211ENST00000534401 NIPSNAP3BQ9BS92 247 aa15.19■□□□□ 0.02
PKP3-211ENST00000534401 ZNF492Q9P255 531 aa15.19■□□□□ 0.02
PKP3-211ENST00000534401 LYRM9A8MSI8 78 aa15.18■□□□□ 0.02
PKP3-211ENST00000534401 SMLR1H3BR10 107 aa15.18■□□□□ 0.02
PKP3-211ENST00000534401 ARPC5O15511 151 aa15.18■□□□□ 0.02
PKP3-211ENST00000534401 ZNF324O75467 553 aaPredicted RBP15.18■□□□□ 0.02
PKP3-211ENST00000534401 ZNF345Q14585 488 aa15.18■□□□□ 0.02
PKP3-211ENST00000534401 ZNF767PQ75MW2 155 aa15.18■□□□□ 0.02
PKP3-211ENST00000534401 ZFAND2AQ8N6M9 145 aa15.18■□□□□ 0.02
PKP3-211ENST00000534401 OR11H4Q8NGC9 324 aa15.18■□□□□ 0.02
PKP3-211ENST00000534401 RNASE8Q8TDE3 154 aaKnown RBP15.18■□□□□ 0.02
PKP3-211ENST00000534401 LINC00467Q9BRT7 94 aa15.18■□□□□ 0.02
PKP3-211ENST00000534401 OTORQ9NRC9 128 aa15.18■□□□□ 0.02
PKP3-211ENST00000534401 DEFB131BA0A096LNP1 70 aa15.17■□□□□ 0.02
PKP3-211ENST00000534401 DIRC3C9JPN6 131 aa15.17■□□□□ 0.02
PKP3-211ENST00000534401 LGALS9CQ6DKI2 356 aa15.17■□□□□ 0.02
PKP3-211ENST00000534401 KCNRGQ8N5I3 272 aa15.17■□□□□ 0.02
PKP3-211ENST00000534401 RXFP4Q8TDU9 374 aa15.17■□□□□ 0.02
PKP3-211ENST00000534401 PLA2G2EQ9NZK7 142 aa15.17■□□□□ 0.02
PKP3-211ENST00000534401 ARL14EPLP0DKL9 152 aa15.16■□□□□ 0.02
PKP3-211ENST00000534401 TMEM78Q5T7P6 136 aa15.16■□□□□ 0.02
PKP3-211ENST00000534401 TMEM263Q8WUH6 116 aaKnown RBP15.16■□□□□ 0.02
PKP3-211ENST00000534401 C16orf74Q96GX8 76 aa15.16■□□□□ 0.02
PKP3-211ENST00000534401 C7orf71A4D174 169 aa15.15■□□□□ 0.02
PKP3-211ENST00000534401 HMGB3O15347 200 aaKnown RBP15.15■□□□□ 0.02
PKP3-211ENST00000534401 CSN1S1P47710 185 aa15.15■□□□□ 0.02
PKP3-211ENST00000534401 ZNF138P52744 262 aa15.15■□□□□ 0.02
PKP3-211ENST00000534401 TMED6Q8WW62 240 aa15.15■□□□□ 0.02
PKP3-211ENST00000534401 PYGO2Q9BRQ0 406 aa15.15■□□□□ 0.02
PKP3-211ENST00000534401 ACTR3CQ9C0K3 210 aaPredicted RBP15.15■□□□□ 0.02
PKP3-211ENST00000534401 LENEPQ9Y5L5 61 aa15.15■□□□□ 0.02
PKP3-211ENST00000534401 HYDINQ4G0P3 5121 aa15.15■□□□□ 0.02
PKP3-211ENST00000534401 TRAV12-3A0A0B4J271 114 aa15.14■□□□□ 0.01
PKP3-211ENST00000534401 PGPA6NDG6 321 aa15.14■□□□□ 0.01
PKP3-211ENST00000534401 IGLL5B9A064 214 aa15.14■□□□□ 0.01
PKP3-211ENST00000534401 GCHFRP30047 84 aa15.14■□□□□ 0.01
PKP3-211ENST00000534401 CD300CQ08708 224 aa15.14■□□□□ 0.01
PKP3-211ENST00000534401 ZNF726P1Q15940 193 aa15.14■□□□□ 0.01
PKP3-211ENST00000534401 Q6ZNX1 250 aa15.14■□□□□ 0.01
PKP3-211ENST00000534401 SSX7Q7RTT5 188 aa15.14■□□□□ 0.01
PKP3-211ENST00000534401 FAM210BQ96KR6 192 aa15.14■□□□□ 0.01
PKP3-211ENST00000534401 EPPK1P58107 5090 aaKnown RBP15.13■□□□□ 0.01
PKP3-211ENST00000534401 IGHV4-4A0A075B6R2 117 aa15.13■□□□□ 0.01
PKP3-211ENST00000534401 PRR9Q5T870 116 aa15.13■□□□□ 0.01
PKP3-211ENST00000534401 LINC00612Q8N6U2 182 aa15.13■□□□□ 0.01
PKP3-211ENST00000534401 ST6GAL2Q96JF0 529 aa15.13■□□□□ 0.01
PKP3-211ENST00000534401 TIMM8BQ9Y5J9 83 aaPredicted RBP15.13■□□□□ 0.01
PKP3-211ENST00000534401 VPS13DQ5THJ4 4388 aa15.12■□□□□ 0.01
PKP3-211ENST00000534401 CXorf1O96002 111 aa15.12■□□□□ 0.01
PKP3-211ENST00000534401 DAD1P61803 113 aa15.12■□□□□ 0.01
PKP3-211ENST00000534401 FAM74A1Q5RGS3 127 aa15.12■□□□□ 0.01
PKP3-211ENST00000534401 A0A0D9SG52 128 aa15.11■□□□□ 0.01
PKP3-211ENST00000534401 J3KRW8 73 aa15.11■□□□□ 0.01
PKP3-211ENST00000534401 BTN1A1Q13410 526 aa15.11■□□□□ 0.01
PKP3-211ENST00000534401 ANXA2RQ3ZCQ2 193 aa15.11■□□□□ 0.01
PKP3-211ENST00000534401 ARPC5LQ9BPX5 153 aa15.11■□□□□ 0.01
PKP3-211ENST00000534401 TMEM167BQ9NRX6 74 aa15.11■□□□□ 0.01
PKP3-211ENST00000534401 KMT2AQ03164 3969 aa15.1■□□□□ 0.01
PKP3-211ENST00000534401 CTXND1A0A1B0GTU2 59 aa15.1■□□□□ 0.01
PKP3-211ENST00000534401 LY6G6CO95867 125 aa15.1■□□□□ 0.01
PKP3-211ENST00000534401 GPX1P07203 203 aa15.1■□□□□ 0.01
PKP3-211ENST00000534401 CCDC28AQ8IWP9 274 aa15.1■□□□□ 0.01
PKP3-211ENST00000534401 Q8TAT8 98 aa15.1■□□□□ 0.01
PKP3-211ENST00000534401 HTN1P15515 57 aa15.09■□□□□ 0.01
PKP3-211ENST00000534401 RNASE4P34096 147 aaKnown RBP15.09■□□□□ 0.01
PKP3-211ENST00000534401 DAZ2Q13117 558 aaKnown RBP15.09■□□□□ 0.01
PKP3-211ENST00000534401 C11orf72Q8NBR9 251 aa15.09■□□□□ 0.01
PKP3-211ENST00000534401 CMTM2Q8TAZ6 248 aa15.09■□□□□ 0.01
PKP3-211ENST00000534401 CBY3A6NI87 242 aa15.08■□□□□ 0
PKP3-211ENST00000534401 Q6AWC8 147 aa15.08■□□□□ 0
PKP3-211ENST00000534401 HYLS1Q96M11 299 aa15.08■□□□□ 0
PKP3-211ENST00000534401 NOP10Q9NPE3 64 aaKnown RBP15.08■□□□□ 0
PKP3-211ENST00000534401 SERTM2A0A1B0GWG4 89 aa15.07■□□□□ 0
PKP3-211ENST00000534401 A0A1W2PRE2 83 aa15.07■□□□□ 0
PKP3-211ENST00000534401 SEC11BP0C7V7 166 aa15.07■□□□□ 0
PKP3-211ENST00000534401 AKR1C8PQ5T2L2 129 aa15.07■□□□□ 0
PKP3-211ENST00000534401 Q6ZQT7 251 aa15.07■□□□□ 0
PKP3-211ENST00000534401 GOLT1AQ6ZVE7 132 aa15.07■□□□□ 0
PKP3-211ENST00000534401 TCTE3Q8IZS6 198 aa15.07■□□□□ 0
PKP3-211ENST00000534401 EIF4E3Q8N5X7 224 aaKnown RBP15.07■□□□□ 0
PKP3-211ENST00000534401 C5orf17Q8NAS9 161 aa15.07■□□□□ 0
PKP3-211ENST00000534401 GGTLC3B5MD39 225 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms