RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 RPL36AP83881 106 aaKnown RBP13.97□□□□□ -0.17
PHRF1-205ENST00000533464 RPL36ALQ969Q0 106 aaKnown RBP13.97□□□□□ -0.17
PHRF1-205ENST00000533464 MALP21145 153 aa13.96□□□□□ -0.17
PHRF1-205ENST00000533464 IGLC7A0M8Q6 106 aa13.96□□□□□ -0.17
PHRF1-205ENST00000533464 C8orf86Q6ZUL3 223 aa13.96□□□□□ -0.17
PHRF1-205ENST00000533464 SLAQ13239 276 aa13.96□□□□□ -0.18
PHRF1-205ENST00000533464 ASPHD1Q5U4P2 390 aa13.96□□□□□ -0.18
PHRF1-205ENST00000533464 IGHV2-70P01814 119 aa13.96□□□□□ -0.18
PHRF1-205ENST00000533464 FAM104BQ5XKR9 115 aa13.96□□□□□ -0.18
PHRF1-205ENST00000533464 IGF2-ASQ6U949 168 aa13.96□□□□□ -0.18
PHRF1-205ENST00000533464 SPOCK3Q9BQ16 436 aa13.95□□□□□ -0.18
PHRF1-205ENST00000533464 MEGF9Q9H1U4 602 aa13.95□□□□□ -0.18
PHRF1-205ENST00000533464 A8MWP6 167 aa13.95□□□□□ -0.18
PHRF1-205ENST00000533464 PRSS46E5RG02 174 aa13.95□□□□□ -0.18
PHRF1-205ENST00000533464 RIPPLY3P57055 190 aa13.95□□□□□ -0.18
PHRF1-205ENST00000533464 C8orf31Q8N9H6 132 aa13.95□□□□□ -0.18
PHRF1-205ENST00000533464 INSP01308 110 aa13.94□□□□□ -0.18
PHRF1-205ENST00000533464 FAM120AOSQ5T036 256 aa13.94□□□□□ -0.18
PHRF1-205ENST00000533464 ZNF491Q8N8L2 437 aa13.94□□□□□ -0.18
PHRF1-205ENST00000533464 SAMD5Q5TGI4 173 aa13.94□□□□□ -0.18
PHRF1-205ENST00000533464 WISP2O76076 250 aa13.94□□□□□ -0.18
PHRF1-205ENST00000533464 VWC2Q2TAL6 325 aa13.93□□□□□ -0.18
PHRF1-205ENST00000533464 IGHV2-5P01817 119 aa13.93□□□□□ -0.18
PHRF1-205ENST00000533464 TEX43Q6ZNM6 134 aa13.93□□□□□ -0.18
PHRF1-205ENST00000533464 PRADC1Q9BSG0 188 aa13.93□□□□□ -0.18
PHRF1-205ENST00000533464 POLR3KQ9Y2Y1 108 aaPredicted RBP13.93□□□□□ -0.18
PHRF1-205ENST00000533464 IGHV4-39P01824 125 aa13.93□□□□□ -0.18
PHRF1-205ENST00000533464 SPINK13Q1W4C9 94 aa13.93□□□□□ -0.18
PHRF1-205ENST00000533464 SMIM27A0A1W2PRY6 76 aa13.93□□□□□ -0.18
PHRF1-205ENST00000533464 SEM1Q6ZVN7 128 aa13.92□□□□□ -0.18
PHRF1-205ENST00000533464 STPG4Q8N801 248 aa13.92□□□□□ -0.18
PHRF1-205ENST00000533464 OTOGLQ3ZCN5 2332 aa13.92□□□□□ -0.18
PHRF1-205ENST00000533464 NDUFA4O00483 81 aa13.92□□□□□ -0.18
PHRF1-205ENST00000533464 OR5A1Q8NGJ0 315 aa13.92□□□□□ -0.18
PHRF1-205ENST00000533464 PRR14LQ5THK1 2151 aa13.91□□□□□ -0.18
PHRF1-205ENST00000533464 RBMY1BA6NDE4 496 aaKnown RBP13.91□□□□□ -0.18
PHRF1-205ENST00000533464 RBMY1EA6NEQ0 496 aaKnown RBP13.91□□□□□ -0.18
PHRF1-205ENST00000533464 RBMY1DP0C7P1 496 aaKnown RBP13.91□□□□□ -0.18
PHRF1-205ENST00000533464 RBMY1A1P0DJD3 496 aaKnown RBP13.91□□□□□ -0.18
PHRF1-205ENST00000533464 RBMY1CP0DJD4 496 aa13.91□□□□□ -0.18
PHRF1-205ENST00000533464 PAX2Q02962 417 aa13.91□□□□□ -0.18
PHRF1-205ENST00000533464 IGFBPL1Q8WX77 278 aa13.91□□□□□ -0.18
PHRF1-205ENST00000533464 C1orf122Q6ZSJ8 110 aa13.91□□□□□ -0.18
PHRF1-205ENST00000533464 ZC2HC1AQ96GY0 325 aa13.91□□□□□ -0.18
PHRF1-205ENST00000533464 Q96MF0 132 aa13.91□□□□□ -0.18
PHRF1-205ENST00000533464 LTBP2Q14767 1821 aa13.91□□□□□ -0.18
PHRF1-205ENST00000533464 PCDH15Q96QU1 1955 aa13.91□□□□□ -0.18
PHRF1-205ENST00000533464 CR1LQ2VPA4 569 aa13.91□□□□□ -0.18
PHRF1-205ENST00000533464 C1orf159Q96HA4 380 aa13.91□□□□□ -0.18
PHRF1-205ENST00000533464 A0A087WX48 190 aa13.9□□□□□ -0.18
PHRF1-205ENST00000533464 KNCNA6PVL3 124 aa13.9□□□□□ -0.18
PHRF1-205ENST00000533464 PRSS57Q6UWY2 283 aa13.9□□□□□ -0.18
PHRF1-205ENST00000533464 PHLDA1Q8WV24 401 aaPredicted RBP13.9□□□□□ -0.18
PHRF1-205ENST00000533464 C17orf77Q96MU5 243 aa13.9□□□□□ -0.18
PHRF1-205ENST00000533464 TMEM238C9JI98 176 aa13.9□□□□□ -0.18
PHRF1-205ENST00000533464 PLA2G2EQ9NZK7 142 aa13.9□□□□□ -0.18
PHRF1-205ENST00000533464 VGLL1Q99990 258 aa13.9□□□□□ -0.18
PHRF1-205ENST00000533464 C1QTNF4Q9BXJ3 329 aa13.9□□□□□ -0.18
PHRF1-205ENST00000533464 MORN3Q6PF18 240 aaPredicted RBP13.89□□□□□ -0.19
PHRF1-205ENST00000533464 PLEKHB2Q96CS7 222 aa13.89□□□□□ -0.19
PHRF1-205ENST00000533464 K7EN84 100 aa13.89□□□□□ -0.19
PHRF1-205ENST00000533464 XCL2Q9UBD3 114 aa13.89□□□□□ -0.19
PHRF1-205ENST00000533464 MRPL51Q4U2R6 128 aaKnown RBP13.89□□□□□ -0.19
PHRF1-205ENST00000533464 Q6ZWC4 215 aa13.89□□□□□ -0.19
PHRF1-205ENST00000533464 ERG28Q9UKR5 140 aa13.89□□□□□ -0.19
PHRF1-205ENST00000533464 TSPAN13O95857 204 aa13.89□□□□□ -0.19
PHRF1-205ENST00000533464 C20orf144Q9BQM9 153 aa13.88□□□□□ -0.19
PHRF1-205ENST00000533464 KLK9Q9UKQ9 250 aa13.88□□□□□ -0.19
PHRF1-205ENST00000533464 TRAV8-2A0A0B4J237 113 aa13.88□□□□□ -0.19
PHRF1-205ENST00000533464 DLEU1O43261 78 aa13.88□□□□□ -0.19
PHRF1-205ENST00000533464 LINC00158P58513 81 aa13.88□□□□□ -0.19
PHRF1-205ENST00000533464 NPC2P61916 151 aa13.88□□□□□ -0.19
PHRF1-205ENST00000533464 EML6Q6ZMW3 1958 aa13.88□□□□□ -0.19
PHRF1-205ENST00000533464 HOXB4P17483 251 aaPredicted RBP13.87□□□□□ -0.19
PHRF1-205ENST00000533464 OR11H6Q8NGC7 330 aa13.87□□□□□ -0.19
PHRF1-205ENST00000533464 TCTEX1D4Q5JR98 221 aa13.87□□□□□ -0.19
PHRF1-205ENST00000533464 DYSFO75923 2080 aa13.87□□□□□ -0.19
PHRF1-205ENST00000533464 ANXA2RQ3ZCQ2 193 aa13.87□□□□□ -0.19
PHRF1-205ENST00000533464 LINC01619G3V211 115 aa13.87□□□□□ -0.19
PHRF1-205ENST00000533464 EREGO14944 169 aa13.87□□□□□ -0.19
PHRF1-205ENST00000533464 PTPN13Q12923 2485 aa13.86□□□□□ -0.19
PHRF1-205ENST00000533464 NDUFS6O75380 124 aaKnown RBP13.86□□□□□ -0.19
PHRF1-205ENST00000533464 C2orf66Q6UXQ4 117 aa13.86□□□□□ -0.19
PHRF1-205ENST00000533464 TRAV13-1A0A0B4J241 112 aa13.86□□□□□ -0.19
PHRF1-205ENST00000533464 CRPP02741 224 aa13.86□□□□□ -0.19
PHRF1-205ENST00000533464 GAGE13Q4V321 117 aa13.86□□□□□ -0.19
PHRF1-205ENST00000533464 RITA1Q96K30 269 aa13.86□□□□□ -0.19
PHRF1-205ENST00000533464 TRAV12-2A0A075B6T6 113 aa13.86□□□□□ -0.19
PHRF1-205ENST00000533464 HLA-DMBP28068 263 aa13.86□□□□□ -0.19
PHRF1-205ENST00000533464 TRPT1Q86TN4 253 aaKnown RBP13.86□□□□□ -0.19
PHRF1-205ENST00000533464 TRAV26-2A0A0B4J265 109 aa13.85□□□□□ -0.19
PHRF1-205ENST00000533464 M0R2P5 195 aa13.85□□□□□ -0.19
PHRF1-205ENST00000533464 MSMPQ1L6U9 139 aa13.85□□□□□ -0.19
PHRF1-205ENST00000533464 DTX2Q86UW9 622 aa13.85□□□□□ -0.19
PHRF1-205ENST00000533464 DEFB130BP0DP73 79 aa13.85□□□□□ -0.19
PHRF1-205ENST00000533464 DEFB130AP0DP74 79 aa13.85□□□□□ -0.19
PHRF1-205ENST00000533464 SONP18583 2426 aaKnown RBP13.85□□□□□ -0.19
PHRF1-205ENST00000533464 SPXQ9BT56 116 aa13.85□□□□□ -0.19
PHRF1-205ENST00000533464 J3QLI3 93 aa13.85□□□□□ -0.19
PHRF1-205ENST00000533464 LTAP01374 205 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms