RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 A0A1W2PRD5 423 aa12.89□□□□□ -0.35
CTSB-228ENST00000533455 A0A1W2PRF3 423 aa12.89□□□□□ -0.35
CTSB-228ENST00000533455 A0A1W2PRM7 423 aa12.89□□□□□ -0.35
CTSB-228ENST00000533455 FABP5P3A8MUU1 101 aa12.89□□□□□ -0.35
CTSB-228ENST00000533455 H3BUT2 72 aa12.89□□□□□ -0.35
CTSB-228ENST00000533455 IGHV3-23P01764 117 aa12.89□□□□□ -0.35
CTSB-228ENST00000533455 HLA-DMBP28068 263 aa12.89□□□□□ -0.35
CTSB-228ENST00000533455 EBI3Q14213 229 aa12.89□□□□□ -0.35
CTSB-228ENST00000533455 CCDC144NLQ6NUI1 221 aa12.89□□□□□ -0.35
CTSB-228ENST00000533455 PRSS57Q6UWY2 283 aa12.89□□□□□ -0.35
CTSB-228ENST00000533455 NXT2Q9NPJ8 142 aaKnown RBP12.89□□□□□ -0.35
CTSB-228ENST00000533455 OOSP1A8MZH6 123 aa12.89□□□□□ -0.35
CTSB-228ENST00000533455 NMUP48645 174 aa12.89□□□□□ -0.35
CTSB-228ENST00000533455 MSRB1Q9NZV6 116 aa12.89□□□□□ -0.35
CTSB-228ENST00000533455 DMXL2Q8TDJ6 3036 aa12.88□□□□□ -0.35
CTSB-228ENST00000533455 RBAKDNA6NC62 111 aa12.88□□□□□ -0.35
CTSB-228ENST00000533455 ORM1P02763 201 aa12.88□□□□□ -0.35
CTSB-228ENST00000533455 ODF1Q14990 250 aa12.88□□□□□ -0.35
CTSB-228ENST00000533455 IGFL4Q6B9Z1 124 aa12.88□□□□□ -0.35
CTSB-228ENST00000533455 HIGD1BQ9P298 99 aa12.88□□□□□ -0.35
CTSB-228ENST00000533455 TNFRSF6BO95407 300 aa12.88□□□□□ -0.35
CTSB-228ENST00000533455 LEPP41159 167 aa12.88□□□□□ -0.35
CTSB-228ENST00000533455 TCTAP57738 103 aa12.88□□□□□ -0.35
CTSB-228ENST00000533455 FBXL19-AS1Q494R0 122 aa12.88□□□□□ -0.35
CTSB-228ENST00000533455 TIMD4Q96H15 378 aa12.88□□□□□ -0.35
CTSB-228ENST00000533455 ARHGAP32A7KAX9 2087 aa12.87□□□□□ -0.35
CTSB-228ENST00000533455 DYNAPQ8N1N2 210 aa12.87□□□□□ -0.35
CTSB-228ENST00000533455 OR2K2Q8NGT1 345 aa12.87□□□□□ -0.35
CTSB-228ENST00000533455 NCBP2LA6PVI3 153 aaKnown RBP12.86□□□□□ -0.35
CTSB-228ENST00000533455 RAB9AP51151 201 aa12.86□□□□□ -0.35
CTSB-228ENST00000533455 WFDC3Q8IUB2 231 aa12.86□□□□□ -0.35
CTSB-228ENST00000533455 OR5A1Q8NGJ0 315 aa12.86□□□□□ -0.35
CTSB-228ENST00000533455 A0A1W2PPM0 123 aa12.86□□□□□ -0.35
CTSB-228ENST00000533455 GAS8-AS1O95177 125 aa12.86□□□□□ -0.35
CTSB-228ENST00000533455 KLK9Q2XQG4 91 aa12.86□□□□□ -0.35
CTSB-228ENST00000533455 C1orf122Q6ZSJ8 110 aa12.86□□□□□ -0.35
CTSB-228ENST00000533455 VMO1Q7Z5L0 202 aa12.86□□□□□ -0.35
CTSB-228ENST00000533455 C18orf15Q96N68 181 aa12.86□□□□□ -0.35
CTSB-228ENST00000533455 KLK9Q9UKQ9 250 aa12.86□□□□□ -0.35
CTSB-228ENST00000533455 HHLA3Q9XRX5 114 aa12.86□□□□□ -0.35
CTSB-228ENST00000533455 MAP1BP46821 2468 aaKnown RBP12.85□□□□□ -0.35
CTSB-228ENST00000533455 ACACAQ13085 2346 aa12.85□□□□□ -0.35
CTSB-228ENST00000533455 IGHV7-81A0A0B4J1V7 117 aa12.85□□□□□ -0.35
CTSB-228ENST00000533455 HLA-DRB4P13762 266 aa12.85□□□□□ -0.35
CTSB-228ENST00000533455 EVI2AP22794 236 aa12.85□□□□□ -0.35
CTSB-228ENST00000533455 MINOS1Q5TGZ0 78 aa12.85□□□□□ -0.35
CTSB-228ENST00000533455 Q8N8P6 123 aa12.85□□□□□ -0.35
CTSB-228ENST00000533455 MEGF9Q9H1U4 602 aa12.85□□□□□ -0.35
CTSB-228ENST00000533455 SMPXQ9UHP9 88 aa12.85□□□□□ -0.35
CTSB-228ENST00000533455 MINOS1-NBL1R4GNA1 71 aa12.85□□□□□ -0.35
CTSB-228ENST00000533455 HLA-DRB4X5D2U9 266 aa12.85□□□□□ -0.35
CTSB-228ENST00000533455 ANKRD11Q6UB99 2663 aaPredicted RBP12.85□□□□□ -0.35
CTSB-228ENST00000533455 SAP30O75446 220 aa12.84□□□□□ -0.35
CTSB-228ENST00000533455 LY6HO94772 140 aa12.84□□□□□ -0.35
CTSB-228ENST00000533455 ERCC8Q13216 396 aa12.84□□□□□ -0.35
CTSB-228ENST00000533455 SLC50A1Q9BRV3 221 aa12.84□□□□□ -0.35
CTSB-228ENST00000533455 CSTL1Q9H114 145 aa12.84□□□□□ -0.35
CTSB-228ENST00000533455 ZFAND3Q9H8U3 227 aa12.84□□□□□ -0.35
CTSB-228ENST00000533455 CEP295Q9C0D2 2601 aa12.84□□□□□ -0.35
CTSB-228ENST00000533455 IGLV2-18A0A075B6J9 118 aa12.84□□□□□ -0.35
CTSB-228ENST00000533455 PRAC2D3DTV9 90 aa12.84□□□□□ -0.35
CTSB-228ENST00000533455 ATP5LO75964 103 aa12.84□□□□□ -0.35
CTSB-228ENST00000533455 IGKCP01834 107 aa12.84□□□□□ -0.35
CTSB-228ENST00000533455 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.84□□□□□ -0.35
CTSB-228ENST00000533455 NEGR1Q7Z3B1 354 aa12.84□□□□□ -0.35
CTSB-228ENST00000533455 FAM110DQ8TAY7 271 aaPredicted RBP12.84□□□□□ -0.35
CTSB-228ENST00000533455 ZNF502Q8TBZ5 544 aa12.84□□□□□ -0.35
CTSB-228ENST00000533455 IGKV2D-26A0A0A0MRZ7 120 aa12.83□□□□□ -0.36
CTSB-228ENST00000533455 FAM90A27PA6NNH2 459 aa12.83□□□□□ -0.36
CTSB-228ENST00000533455 PRSS47A8MTI9 375 aa12.83□□□□□ -0.36
CTSB-228ENST00000533455 BUB3O43684 328 aa12.83□□□□□ -0.36
CTSB-228ENST00000533455 TMEM11P17152 192 aa12.83□□□□□ -0.36
CTSB-228ENST00000533455 RAB37Q96AX2 223 aa12.83□□□□□ -0.36
CTSB-228ENST00000533455 NAA38Q9BRA0 125 aaKnown RBP12.83□□□□□ -0.36
CTSB-228ENST00000533455 ADGRG4Q8IZF6 3080 aa12.83□□□□□ -0.36
CTSB-228ENST00000533455 GRNP28799 593 aaKnown RBP12.83□□□□□ -0.36
CTSB-228ENST00000533455 IL17RELQ6ZVW7 336 aa12.83□□□□□ -0.36
CTSB-228ENST00000533455 DTX2Q86UW9 622 aa12.83□□□□□ -0.36
CTSB-228ENST00000533455 Q8N9W7 124 aa12.83□□□□□ -0.36
CTSB-228ENST00000533455 SPCS1Q9Y6A9 102 aa12.83□□□□□ -0.36
CTSB-228ENST00000533455 ATMQ13315 3056 aa12.82□□□□□ -0.36
CTSB-228ENST00000533455 G3V4G9 280 aa12.82□□□□□ -0.36
CTSB-228ENST00000533455 SMIM13P0DJ93 91 aa12.82□□□□□ -0.36
CTSB-228ENST00000533455 TMEM158Q8WZ71 300 aa12.82□□□□□ -0.36
CTSB-228ENST00000533455 KALRNO60229 2985 aa12.81□□□□□ -0.36
CTSB-228ENST00000533455 IGKV3D-20A0A0C4DH25 116 aa12.81□□□□□ -0.36
CTSB-228ENST00000533455 DPM2O94777 84 aa12.81□□□□□ -0.36
CTSB-228ENST00000533455 PRSS1P07477 247 aa12.81□□□□□ -0.36
CTSB-228ENST00000533455 CHAC1Q9BUX1 264 aa12.81□□□□□ -0.36
CTSB-228ENST00000533455 MSRB2Q9Y3D2 182 aa12.81□□□□□ -0.36
CTSB-228ENST00000533455 TPRP12270 2363 aaKnown RBP12.81□□□□□ -0.36
CTSB-228ENST00000533455 FABP2P12104 132 aa12.81□□□□□ -0.36
CTSB-228ENST00000533455 GATA1P15976 413 aaPredicted RBP12.81□□□□□ -0.36
CTSB-228ENST00000533455 C11orf71Q6IPW1 123 aa12.81□□□□□ -0.36
CTSB-228ENST00000533455 MRPL53Q96EL3 112 aaKnown RBP12.81□□□□□ -0.36
CTSB-228ENST00000533455 FOXC2Q99958 501 aa12.81□□□□□ -0.36
CTSB-228ENST00000533455 IGHV3OR16-8A0A075B7F1 116 aa12.8□□□□□ -0.36
CTSB-228ENST00000533455 FXYD2P54710 66 aa12.8□□□□□ -0.36
CTSB-228ENST00000533455 RNF182Q8N6D2 247 aa12.8□□□□□ -0.36
CTSB-228ENST00000533455 C11orf21Q9P2W6 132 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms