RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 SVBPQ8N300 66 aa8.77□□□□□ -1.01
CAPN1-223ENST00000533079 SUN5Q8TC36 379 aa8.77□□□□□ -1.01
CAPN1-223ENST00000533079 TXNDC17Q9BRA2 123 aa8.77□□□□□ -1.01
CAPN1-223ENST00000533079 GOLT1BQ9Y3E0 138 aa8.77□□□□□ -1.01
CAPN1-223ENST00000533079 YTHDF2Q9Y5A9 579 aaKnown RBP8.77□□□□□ -1.01
CAPN1-223ENST00000533079 IGKV1D-37A0A075B6S9 117 aa8.76□□□□□ -1.01
CAPN1-223ENST00000533079 IGHV3OR16-12A0A075B7B8 117 aa8.76□□□□□ -1.01
CAPN1-223ENST00000533079 LOC102723971A0A1B0GUV8 181 aa8.76□□□□□ -1.01
CAPN1-223ENST00000533079 C9JQL5 133 aa8.76□□□□□ -1.01
CAPN1-223ENST00000533079 F8W036 122 aa8.76□□□□□ -1.01
CAPN1-223ENST00000533079 IGKV1-17P01599 117 aa8.76□□□□□ -1.01
CAPN1-223ENST00000533079 SFTA3P0C7M3 94 aa8.76□□□□□ -1.01
CAPN1-223ENST00000533079 BCL2P10415 239 aa8.76□□□□□ -1.01
CAPN1-223ENST00000533079 ICAM4Q14773 271 aa8.76□□□□□ -1.01
CAPN1-223ENST00000533079 SPATA31B1PQ5VZV4 182 aa8.76□□□□□ -1.01
CAPN1-223ENST00000533079 SSX7Q7RTT5 188 aa8.76□□□□□ -1.01
CAPN1-223ENST00000533079 NPIPB3Q92617 1050 aa8.76□□□□□ -1.01
CAPN1-223ENST00000533079 MANBALQ9NQG1 85 aa8.76□□□□□ -1.01
CAPN1-223ENST00000533079 VAX2Q9UIW0 290 aa8.76□□□□□ -1.01
CAPN1-223ENST00000533079 DMBT1Q9UGM3 2413 aaPredicted RBP8.75□□□□□ -1.01
CAPN1-223ENST00000533079 CXorf1O96002 111 aa8.75□□□□□ -1.01
CAPN1-223ENST00000533079 SRP19P09132 144 aaKnown RBP8.75□□□□□ -1.01
CAPN1-223ENST00000533079 OR5G3P0C626 314 aa8.75□□□□□ -1.01
CAPN1-223ENST00000533079 BTF3P20290 206 aaKnown RBP8.75□□□□□ -1.01
CAPN1-223ENST00000533079 CCL18P55774 89 aa8.75□□□□□ -1.01
CAPN1-223ENST00000533079 PLP1P60201 277 aa8.75□□□□□ -1.01
CAPN1-223ENST00000533079 TTC32Q5I0X7 151 aa8.75□□□□□ -1.01
CAPN1-223ENST00000533079 FAM122CQ6P4D5 195 aa8.75□□□□□ -1.01
CAPN1-223ENST00000533079 SIGLEC15Q6ZMC9 328 aa8.75□□□□□ -1.01
CAPN1-223ENST00000533079 FOXI2Q6ZQN5 318 aa8.75□□□□□ -1.01
CAPN1-223ENST00000533079 OR1L4Q8NGR5 311 aa8.75□□□□□ -1.01
CAPN1-223ENST00000533079 Q8WTZ3 238 aa8.75□□□□□ -1.01
CAPN1-223ENST00000533079 ACY3Q96HD9 319 aa8.75□□□□□ -1.01
CAPN1-223ENST00000533079 MRPL32Q9BYC8 188 aaKnown RBP8.75□□□□□ -1.01
CAPN1-223ENST00000533079 SAV1Q9H4B6 383 aaPredicted RBP8.75□□□□□ -1.01
CAPN1-223ENST00000533079 DNAJC4Q9NNZ3 241 aa8.75□□□□□ -1.01
CAPN1-223ENST00000533079 ARL2-SNX15V9GYD0 113 aa8.75□□□□□ -1.01
CAPN1-223ENST00000533079 SNAPINO95295 136 aa8.74□□□□□ -1.01
CAPN1-223ENST00000533079 APOC3P02656 99 aa8.74□□□□□ -1.01
CAPN1-223ENST00000533079 FABP1P07148 127 aa8.74□□□□□ -1.01
CAPN1-223ENST00000533079 ADCYAP1P18509 176 aa8.74□□□□□ -1.01
CAPN1-223ENST00000533079 RND2P52198 227 aa8.74□□□□□ -1.01
CAPN1-223ENST00000533079 YPEL3P61236 119 aaPredicted RBP8.74□□□□□ -1.01
CAPN1-223ENST00000533079 RRN3P1Q2M238 152 aa8.74□□□□□ -1.01
CAPN1-223ENST00000533079 GCSAMLQ5JQS6 135 aa8.74□□□□□ -1.01
CAPN1-223ENST00000533079 PFDN5Q99471 154 aa8.74□□□□□ -1.01
CAPN1-223ENST00000533079 SLC25A22Q9H936 323 aa8.74□□□□□ -1.01
CAPN1-223ENST00000533079 MRPL36Q9P0J6 103 aaKnown RBP8.74□□□□□ -1.01
CAPN1-223ENST00000533079 FUT9Q9Y231 359 aa8.74□□□□□ -1.01
CAPN1-223ENST00000533079 ZFP92A6NM28 416 aa8.73□□□□□ -1.01
CAPN1-223ENST00000533079 LYRM9A8MSI8 78 aa8.73□□□□□ -1.01
CAPN1-223ENST00000533079 TMEM250H0YL14 139 aa8.73□□□□□ -1.01
CAPN1-223ENST00000533079 BUB3O43684 328 aa8.73□□□□□ -1.01
CAPN1-223ENST00000533079 IGLC1P0CG04 106 aa8.73□□□□□ -1.01
CAPN1-223ENST00000533079 INAFM2P0DMQ5 153 aa8.73□□□□□ -1.01
CAPN1-223ENST00000533079 TAS2R45P59539 299 aa8.73□□□□□ -1.01
CAPN1-223ENST00000533079 TIGITQ495A1 244 aa8.73□□□□□ -1.01
CAPN1-223ENST00000533079 PQLC2Q6ZP29 291 aa8.73□□□□□ -1.01
CAPN1-223ENST00000533079 GNG13Q9P2W3 67 aa8.73□□□□□ -1.01
CAPN1-223ENST00000533079 IL4P05112 153 aa8.72□□□□□ -1.01
CAPN1-223ENST00000533079 ID1P41134 155 aa8.72□□□□□ -1.01
CAPN1-223ENST00000533079 FGF8P55075 233 aaPredicted RBP8.72□□□□□ -1.01
CAPN1-223ENST00000533079 USF2Q15853 346 aaPredicted RBP8.72□□□□□ -1.01
CAPN1-223ENST00000533079 GDF5OSQ5U4N7 250 aa8.72□□□□□ -1.01
CAPN1-223ENST00000533079 FAM78BQ5VT40 261 aa8.72□□□□□ -1.01
CAPN1-223ENST00000533079 TMEM37Q8WXS4 190 aa8.72□□□□□ -1.01
CAPN1-223ENST00000533079 TMEM167BQ9NRX6 74 aa8.72□□□□□ -1.01
CAPN1-223ENST00000533079 A0A1B0GV50 99 aa8.71□□□□□ -1.02
CAPN1-223ENST00000533079 IGKV3-20P01619 116 aa8.71□□□□□ -1.02
CAPN1-223ENST00000533079 FXYD7P58549 80 aa8.71□□□□□ -1.02
CAPN1-223ENST00000533079 PSG9Q00887 426 aa8.71□□□□□ -1.02
CAPN1-223ENST00000533079 MEF2BQ02080 365 aaPredicted RBP8.71□□□□□ -1.02
CAPN1-223ENST00000533079 ZNF90Q03938 601 aa8.71□□□□□ -1.02
CAPN1-223ENST00000533079 FAM74A3Q4VXF1 159 aa8.71□□□□□ -1.02
CAPN1-223ENST00000533079 SAMD13Q5VXD3 122 aa8.71□□□□□ -1.02
CAPN1-223ENST00000533079 C1orf158Q8N1D5 194 aa8.71□□□□□ -1.02
CAPN1-223ENST00000533079 RXFP4Q8TDU9 374 aa8.71□□□□□ -1.02
CAPN1-223ENST00000533079 A0A1W2PPQ1 181 aa8.7□□□□□ -1.02
CAPN1-223ENST00000533079 PDE6DO43924 150 aa8.7□□□□□ -1.02
CAPN1-223ENST00000533079 TOMM40O96008 361 aa8.7□□□□□ -1.02
CAPN1-223ENST00000533079 GCHFRP30047 84 aa8.7□□□□□ -1.02
CAPN1-223ENST00000533079 KRTAP10-2P60368 255 aa8.7□□□□□ -1.02
CAPN1-223ENST00000533079 C10orf113Q5VZT2 155 aa8.7□□□□□ -1.02
CAPN1-223ENST00000533079 PATE2Q6UY27 113 aa8.7□□□□□ -1.02
CAPN1-223ENST00000533079 S100A7AQ86SG5 101 aa8.7□□□□□ -1.02
CAPN1-223ENST00000533079 OR4B1Q8NGF8 309 aa8.7□□□□□ -1.02
CAPN1-223ENST00000533079 Q9H3A6 140 aa8.7□□□□□ -1.02
CAPN1-223ENST00000533079 TMPRSS5Q9H3S3 457 aa8.7□□□□□ -1.02
CAPN1-223ENST00000533079 LINC00588Q9Y4M8 146 aa8.7□□□□□ -1.02
CAPN1-223ENST00000533079 MYCBP2O75592 4640 aa8.7□□□□□ -1.02
CAPN1-223ENST00000533079 F6UZH7 168 aa8.69□□□□□ -1.02
CAPN1-223ENST00000533079 HMGB3O15347 200 aaKnown RBP8.69□□□□□ -1.02
CAPN1-223ENST00000533079 COX7A2P2O60397 106 aa8.69□□□□□ -1.02
CAPN1-223ENST00000533079 HYPMO75409 117 aa8.69□□□□□ -1.02
CAPN1-223ENST00000533079 NUDT3O95989 172 aa8.69□□□□□ -1.02
CAPN1-223ENST00000533079 RD3LP0DJH9 198 aa8.69□□□□□ -1.02
CAPN1-223ENST00000533079 ARL14EPLP0DKL9 152 aa8.69□□□□□ -1.02
CAPN1-223ENST00000533079 GATA2P23769 480 aaPredicted RBP8.69□□□□□ -1.02
CAPN1-223ENST00000533079 TSPOP30536 169 aa8.69□□□□□ -1.02
CAPN1-223ENST00000533079 EBLN2Q6P2I7 272 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms