RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 GOLT1BQ9Y3E0 138 aa13.44□□□□□ -0.26
GMDS-208ENST00000530927 ZNF705GA8MUZ8 300 aaPredicted RBP13.43□□□□□ -0.26
GMDS-208ENST00000530927 SULT1A2P50226 295 aa13.43□□□□□ -0.26
GMDS-208ENST00000530927 ERCC8Q13216 396 aa13.43□□□□□ -0.26
GMDS-208ENST00000530927 KHDC3LQ587J8 217 aa13.43□□□□□ -0.26
GMDS-208ENST00000530927 TOR2AQ5JU69 321 aa13.43□□□□□ -0.26
GMDS-208ENST00000530927 ALKAL2Q6UX46 152 aa13.43□□□□□ -0.26
GMDS-208ENST00000530927 Q6ZTC4 211 aa13.43□□□□□ -0.26
GMDS-208ENST00000530927 NEU1Q99519 415 aa13.43□□□□□ -0.26
GMDS-208ENST00000530927 PAXXQ9BUH6 204 aa13.43□□□□□ -0.26
GMDS-208ENST00000530927 CTXND1A0A1B0GTU2 59 aa13.42□□□□□ -0.26
GMDS-208ENST00000530927 J3KRW8 73 aa13.42□□□□□ -0.26
GMDS-208ENST00000530927 PPP1R14DQ9NXH3 145 aa13.42□□□□□ -0.26
GMDS-208ENST00000530927 OR7C2O60412 319 aa13.41□□□□□ -0.26
GMDS-208ENST00000530927 ZNF253O75346 499 aa13.41□□□□□ -0.26
GMDS-208ENST00000530927 INSP01308 110 aa13.41□□□□□ -0.26
GMDS-208ENST00000530927 STAG3L2P0CL84 134 aa13.41□□□□□ -0.26
GMDS-208ENST00000530927 STAG3L3P0CL85 134 aa13.41□□□□□ -0.26
GMDS-208ENST00000530927 CT45A10P0DMU9 189 aa13.41□□□□□ -0.26
GMDS-208ENST00000530927 FHITP49789 147 aa13.41□□□□□ -0.26
GMDS-208ENST00000530927 ICAM4Q14773 271 aa13.41□□□□□ -0.26
GMDS-208ENST00000530927 ZNF726P1Q15940 193 aa13.41□□□□□ -0.26
GMDS-208ENST00000530927 C12orf74Q32Q52 190 aa13.41□□□□□ -0.26
GMDS-208ENST00000530927 OR10J6PQ8NGY7 276 aa13.41□□□□□ -0.26
GMDS-208ENST00000530927 FAM213BQ8TBF2 198 aa13.41□□□□□ -0.26
GMDS-208ENST00000530927 RNF141Q8WVD5 230 aa13.41□□□□□ -0.26
GMDS-208ENST00000530927 TMEM208Q9BTX3 173 aa13.41□□□□□ -0.26
GMDS-208ENST00000530927 LOC102723971A0A1B0GUV8 181 aa13.4□□□□□ -0.26
GMDS-208ENST00000530927 KRBOX1C9JBD0 128 aa13.4□□□□□ -0.26
GMDS-208ENST00000530927 HMGB3O15347 200 aaKnown RBP13.4□□□□□ -0.26
GMDS-208ENST00000530927 NBEAP1P0C6P0 100 aa13.4□□□□□ -0.26
GMDS-208ENST00000530927 PQLC2Q6ZP29 291 aa13.4□□□□□ -0.26
GMDS-208ENST00000530927 IGKV2-40A0A087WW87 121 aaPredicted RBP13.39□□□□□ -0.27
GMDS-208ENST00000530927 SMIM9A6NGZ8 99 aa13.39□□□□□ -0.27
GMDS-208ENST00000530927 NPIPB6E9PJ23 425 aa13.39□□□□□ -0.27
GMDS-208ENST00000530927 IGKV2D-40P01614 121 aaPredicted RBP13.39□□□□□ -0.27
GMDS-208ENST00000530927 HBE1P02100 147 aa13.39□□□□□ -0.27
GMDS-208ENST00000530927 AZU1P20160 251 aa13.39□□□□□ -0.27
GMDS-208ENST00000530927 FAM74A1Q5RGS3 127 aa13.39□□□□□ -0.27
GMDS-208ENST00000530927 SSX7Q7RTT5 188 aa13.39□□□□□ -0.27
GMDS-208ENST00000530927 CXorf1O96002 111 aa13.39□□□□□ -0.27
GMDS-208ENST00000530927 AMBPP02760 352 aa13.39□□□□□ -0.27
GMDS-208ENST00000530927 CDKN1BP46527 198 aa13.39□□□□□ -0.27
GMDS-208ENST00000530927 UBE2L3P68036 154 aaKnown RBP13.39□□□□□ -0.27
GMDS-208ENST00000530927 PDE6HQ13956 83 aa13.39□□□□□ -0.27
GMDS-208ENST00000530927 RRN3P1Q2M238 152 aa13.39□□□□□ -0.27
GMDS-208ENST00000530927 MBD3L1Q8WWY6 194 aa13.39□□□□□ -0.27
GMDS-208ENST00000530927 YTHDF2Q9Y5A9 579 aaKnown RBP13.39□□□□□ -0.27
GMDS-208ENST00000530927 MAP1LC3B2A6NCE7 125 aa13.38□□□□□ -0.27
GMDS-208ENST00000530927 H2AFB1P0C5Y9 115 aa13.38□□□□□ -0.27
GMDS-208ENST00000530927 ARL14EPLP0DKL9 152 aa13.38□□□□□ -0.27
GMDS-208ENST00000530927 HTN1P15515 57 aa13.38□□□□□ -0.27
GMDS-208ENST00000530927 FAM222AQ5U5X8 452 aa13.38□□□□□ -0.27
GMDS-208ENST00000530927 GFI1BQ5VTD9 330 aa13.38□□□□□ -0.27
GMDS-208ENST00000530927 MAP1LC3BQ9GZQ8 125 aa13.38□□□□□ -0.27
GMDS-208ENST00000530927 KLK5Q9Y337 293 aaPredicted RBP13.38□□□□□ -0.27
GMDS-208ENST00000530927 RANP62826 216 aaKnown RBP13.37□□□□□ -0.27
GMDS-208ENST00000530927 SFT2D1Q8WV19 159 aa13.37□□□□□ -0.27
GMDS-208ENST00000530927 MRPL53Q96EL3 112 aaKnown RBP13.37□□□□□ -0.27
GMDS-208ENST00000530927 LINC01587Q99440 93 aa13.37□□□□□ -0.27
GMDS-208ENST00000530927 VGLL1Q99990 258 aa13.37□□□□□ -0.27
GMDS-208ENST00000530927 AGPAT4-IT1Q9H0P7 198 aa13.37□□□□□ -0.27
GMDS-208ENST00000530927 DKK2Q9UBU2 259 aa13.37□□□□□ -0.27
GMDS-208ENST00000530927 GCHFRP30047 84 aa13.36□□□□□ -0.27
GMDS-208ENST00000530927 LINC00476Q8WZB0 136 aa13.36□□□□□ -0.27
GMDS-208ENST00000530927 AAMDCQ9H7C9 122 aa13.36□□□□□ -0.27
GMDS-208ENST00000530927 TMEM167BQ9NRX6 74 aa13.36□□□□□ -0.27
GMDS-208ENST00000530927 IGLL5B9A064 214 aa13.35□□□□□ -0.27
GMDS-208ENST00000530927 TEX46H3BTG2 121 aa13.35□□□□□ -0.27
GMDS-208ENST00000530927 FGF8P55075 233 aaPredicted RBP13.35□□□□□ -0.27
GMDS-208ENST00000530927 BLOC1S1P78537 153 aa13.35□□□□□ -0.27
GMDS-208ENST00000530927 C2CD4CQ8TF44 421 aa13.35□□□□□ -0.27
GMDS-208ENST00000530927 Q9H3A6 140 aa13.35□□□□□ -0.27
GMDS-208ENST00000530927 PRELID1Q9Y255 219 aa13.35□□□□□ -0.27
GMDS-208ENST00000530927 TRAV1-1A0A0B4J248 108 aa13.34□□□□□ -0.27
GMDS-208ENST00000530927 PLAC8L1A1L4L8 177 aa13.34□□□□□ -0.27
GMDS-208ENST00000530927 TMEM189A5PLL7 270 aa13.34□□□□□ -0.27
GMDS-208ENST00000530927 LY6G6CO95867 125 aa13.34□□□□□ -0.27
GMDS-208ENST00000530927 SPART-AS1P0CW21 52 aa13.34□□□□□ -0.27
GMDS-208ENST00000530927 UQCC3Q6UW78 93 aa13.34□□□□□ -0.27
GMDS-208ENST00000530927 IQCF2Q8IXL9 164 aa13.34□□□□□ -0.27
GMDS-208ENST00000530927 SUN5Q8TC36 379 aa13.34□□□□□ -0.27
GMDS-208ENST00000530927 VPS13DQ5THJ4 4388 aa13.34□□□□□ -0.27
GMDS-208ENST00000530927 TRAV10A0A0B4J240 114 aa13.33□□□□□ -0.28
GMDS-208ENST00000530927 TRAV12-3A0A0B4J271 114 aa13.33□□□□□ -0.28
GMDS-208ENST00000530927 PRR9Q5T870 116 aa13.33□□□□□ -0.28
GMDS-208ENST00000530927 Q6ZQT7 251 aa13.33□□□□□ -0.28
GMDS-208ENST00000530927 Q8TAT8 98 aa13.33□□□□□ -0.28
GMDS-208ENST00000530927 FAM19A4Q96LR4 140 aa13.33□□□□□ -0.28
GMDS-208ENST00000530927 DEFB131BA0A096LNP1 70 aa13.32□□□□□ -0.28
GMDS-208ENST00000530927 RAB19A4D1S5 217 aa13.32□□□□□ -0.28
GMDS-208ENST00000530927 LEPP41159 167 aa13.32□□□□□ -0.28
GMDS-208ENST00000530927 BTN1A1Q13410 526 aa13.32□□□□□ -0.28
GMDS-208ENST00000530927 KMT2AQ03164 3969 aa13.32□□□□□ -0.28
GMDS-208ENST00000530927 C11orf94C9JXX5 98 aa13.31□□□□□ -0.28
GMDS-208ENST00000530927 TSPOP30536 169 aa13.31□□□□□ -0.28
GMDS-208ENST00000530927 LYPD1Q8N2G4 141 aa13.31□□□□□ -0.28
GMDS-208ENST00000530927 ODF3Q96PU9 254 aa13.31□□□□□ -0.28
GMDS-208ENST00000530927 NIPSNAP3BQ9BS92 247 aa13.31□□□□□ -0.28
GMDS-208ENST00000530927 TMPRSS5Q9H3S3 457 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms